MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3

Total Repeats: 70

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017073	ATT	2	6	1330	1335	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017073	CAT	2	6	1732	1737	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_017073	TTC	2	6	5130	5135	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017073	ACA	2	6	5150	5155	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_017073	GCA	2	6	5213	5218	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_017073	ACA	2	6	7358	7363	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_017073	CCA	2	6	7428	7433	33.33 %	0 %	0 %	66.67 %	Non-Coding
8	NC_017073	TAG	2	6	7446	7451	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_017073	TTC	2	6	19963	19968	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_017073	ATA	2	6	20102	20107	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_017073	TAT	2	6	20153	20158	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_017073	CTT	2	6	20165	20170	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_017073	TTG	2	6	20178	20183	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_017073	AGG	2	6	20207	20212	33.33 %	0 %	66.67 %	0 %	Non-Coding
15	NC_017073	TCC	2	6	21315	21320	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_017073	ATA	2	6	21326	21331	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_017073	ATT	2	6	21347	21352	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_017073	TCC	2	6	21989	21994	0 %	33.33 %	0 %	66.67 %	Non-Coding
19	NC_017073	CCT	2	6	28996	29001	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_017073	TGT	2	6	29069	29074	0 %	66.67 %	33.33 %	0 %	Non-Coding
21	NC_017073	TCC	2	6	29646	29651	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_017073	TTC	2	6	29705	29710	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_017073	TTA	2	6	30152	30157	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017073	CGG	2	6	30255	30260	0 %	0 %	66.67 %	33.33 %	Non-Coding
25	NC_017073	CAC	2	6	30362	30367	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_017073	AAT	2	6	30454	30459	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017073	CTC	2	6	33728	33733	0 %	33.33 %	0 %	66.67 %	Non-Coding
28	NC_017073	CAT	2	6	39747	39752	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_017073	CTG	2	6	40765	40770	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_017073	CTA	2	6	40940	40945	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_017073	CAC	2	6	41270	41275	33.33 %	0 %	0 %	66.67 %	Non-Coding
32	NC_017073	CGG	2	6	41844	41849	0 %	0 %	66.67 %	33.33 %	Non-Coding
33	NC_017073	TCT	2	6	42126	42131	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_017073	CGT	2	6	42203	42208	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_017073	CCG	2	6	42326	42331	0 %	0 %	33.33 %	66.67 %	Non-Coding
36	NC_017073	GCG	2	6	42349	42354	0 %	0 %	66.67 %	33.33 %	Non-Coding
37	NC_017073	ATA	2	6	42832	42837	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_017073	ACA	3	9	42909	42917	66.67 %	0 %	0 %	33.33 %	Non-Coding
39	NC_017073	AAG	2	6	43938	43943	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_017073	CGG	2	6	44647	44652	0 %	0 %	66.67 %	33.33 %	Non-Coding
41	NC_017073	GGA	2	6	50344	50349	33.33 %	0 %	66.67 %	0 %	Non-Coding
42	NC_017073	GGA	2	6	50784	50789	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_017073	AGG	2	6	51753	51758	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_017073	ACA	2	6	51761	51766	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_017073	GGA	2	6	52305	52310	33.33 %	0 %	66.67 %	0 %	Non-Coding
46	NC_017073	AGG	2	6	52313	52318	33.33 %	0 %	66.67 %	0 %	Non-Coding
47	NC_017073	GGA	2	6	53143	53148	33.33 %	0 %	66.67 %	0 %	Non-Coding
48	NC_017073	GGC	2	6	56141	56146	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_017073	ATT	2	6	64315	64320	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017073	TCC	2	6	66040	66045	0 %	33.33 %	0 %	66.67 %	Non-Coding
51	NC_017073	CAA	2	6	66117	66122	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_017073	ATA	2	6	66124	66129	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_017073	ATA	2	6	66169	66174	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_017073	TCC	2	6	70044	70049	0 %	33.33 %	0 %	66.67 %	Non-Coding
55	NC_017073	GCA	2	6	71011	71016	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
56	NC_017073	ATT	2	6	71072	71077	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017073	ACG	2	6	71092	71097	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_017073	GAT	2	6	72035	72040	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_017073	ATC	2	6	72129	72134	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_017073	CTA	2	6	72232	72237	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_017073	CTT	2	6	72340	72345	0 %	66.67 %	0 %	33.33 %	Non-Coding
62	NC_017073	ATG	2	6	72366	72371	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_017073	CTT	2	6	72653	72658	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_017073	TTA	2	6	72729	72734	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017073	TTC	2	6	72749	72754	0 %	66.67 %	0 %	33.33 %	Non-Coding
66	NC_017073	CCG	2	6	72800	72805	0 %	0 %	33.33 %	66.67 %	Non-Coding
67	NC_017073	CTG	2	6	72811	72816	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_017073	GGC	2	6	72918	72923	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_017073	TTC	2	6	72924	72929	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_017073	GGA	2	6	73369	73374	33.33 %	0 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.