MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Saprospira grandis str. Lewin plasmid unnamed

Total Repeats: 106

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016936	TTA	2	6	5	10	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_016936	TGA	2	6	15	20	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_016936	TGT	2	6	21	26	0 %	66.67 %	33.33 %	0 %	Non-Coding
4	NC_016936	GCA	2	6	50	55	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_016936	GCG	2	6	61	66	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_016936	CTG	2	6	138	143	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_016936	GGC	2	6	345	350	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_016936	GCC	2	6	354	359	0 %	0 %	33.33 %	66.67 %	Non-Coding
9	NC_016936	CAG	2	6	401	406	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_016936	GCC	2	6	426	431	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_016936	GGC	2	6	435	440	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_016936	TCT	2	6	5150	5155	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_016936	GCG	2	6	5371	5376	0 %	0 %	66.67 %	33.33 %	Non-Coding
14	NC_016936	CTG	2	6	5408	5413	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_016936	GCA	2	6	10842	10847	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_016936	GCG	2	6	10853	10858	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_016936	CTG	2	6	10929	10934	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_016936	AAT	2	6	10977	10982	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_016936	CTT	2	6	11019	11024	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_016936	GCA	2	6	12759	12764	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_016936	TCA	2	6	12795	12800	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_016936	GCC	2	6	15211	15216	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_016936	CGG	2	6	15219	15224	0 %	0 %	66.67 %	33.33 %	Non-Coding
24	NC_016936	TAT	2	6	18842	18847	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_016936	GCC	2	6	18891	18896	0 %	0 %	33.33 %	66.67 %	Non-Coding
26	NC_016936	TAA	2	6	19188	19193	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_016936	GGC	2	6	20313	20318	0 %	0 %	66.67 %	33.33 %	Non-Coding
28	NC_016936	GCC	2	6	20322	20327	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_016936	ACA	2	6	20435	20440	66.67 %	0 %	0 %	33.33 %	Non-Coding
30	NC_016936	CGA	2	6	20460	20465	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_016936	CCG	2	6	20479	20484	0 %	0 %	33.33 %	66.67 %	Non-Coding
32	NC_016936	GCG	2	6	20495	20500	0 %	0 %	66.67 %	33.33 %	Non-Coding
33	NC_016936	AAG	2	6	20782	20787	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_016936	ATC	2	6	21862	21867	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
35	NC_016936	TCA	2	6	21891	21896	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_016936	TAA	2	6	21902	21907	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_016936	TAA	2	6	21947	21952	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_016936	CTT	2	6	21979	21984	0 %	66.67 %	0 %	33.33 %	Non-Coding
39	NC_016936	ACT	2	6	22042	22047	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_016936	CTA	2	6	22077	22082	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_016936	TAT	2	6	22142	22147	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_016936	ATC	2	6	24321	24326	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_016936	GAC	2	6	25377	25382	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_016936	CAA	2	6	25445	25450	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_016936	AAC	2	6	25495	25500	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_016936	TGT	2	6	25501	25506	0 %	66.67 %	33.33 %	0 %	Non-Coding
47	NC_016936	AAT	2	6	25545	25550	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_016936	CGT	2	6	25850	25855	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_016936	TTA	2	6	26002	26007	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_016936	CAA	3	9	26205	26213	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_016936	ACA	3	9	26222	26230	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_016936	TGT	3	9	26320	26328	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_016936	AAC	2	6	26336	26341	66.67 %	0 %	0 %	33.33 %	Non-Coding
54	NC_016936	AAC	2	6	26402	26407	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_016936	ACG	2	6	26428	26433	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
56	NC_016936	ACG	3	9	26458	26466	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_016936	ACG	2	6	26482	26487	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_016936	TAG	2	6	28236	28241	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_016936	TAG	2	6	28445	28450	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_016936	GCA	2	6	28596	28601	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_016936	TGC	2	6	28754	28759	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_016936	GAA	2	6	30546	30551	66.67 %	0 %	33.33 %	0 %	Non-Coding
63	NC_016936	CCT	2	6	30578	30583	0 %	33.33 %	0 %	66.67 %	Non-Coding
64	NC_016936	GTC	2	6	30611	30616	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_016936	GGA	2	6	30821	30826	33.33 %	0 %	66.67 %	0 %	Non-Coding
66	NC_016936	TAT	2	6	31501	31506	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_016936	GCA	2	6	33635	33640	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_016936	GCG	2	6	33646	33651	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_016936	CGC	2	6	33686	33691	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_016936	CCA	2	6	33745	33750	33.33 %	0 %	0 %	66.67 %	Non-Coding
71	NC_016936	GCC	2	6	33779	33784	0 %	0 %	33.33 %	66.67 %	Non-Coding
72	NC_016936	GAT	2	6	34965	34970	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_016936	GCC	2	6	35999	36004	0 %	0 %	33.33 %	66.67 %	Non-Coding
74	NC_016936	GGC	2	6	36008	36013	0 %	0 %	66.67 %	33.33 %	Non-Coding
75	NC_016936	GGC	2	6	40289	40294	0 %	0 %	66.67 %	33.33 %	Non-Coding
76	NC_016936	GCC	2	6	40298	40303	0 %	0 %	33.33 %	66.67 %	Non-Coding
77	NC_016936	AAC	2	6	40447	40452	66.67 %	0 %	0 %	33.33 %	Non-Coding
78	NC_016936	CAA	3	9	40456	40464	66.67 %	0 %	0 %	33.33 %	Non-Coding
79	NC_016936	CCT	2	6	41696	41701	0 %	33.33 %	0 %	66.67 %	Non-Coding
80	NC_016936	CTG	2	6	41788	41793	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
81	NC_016936	CTC	2	6	41809	41814	0 %	33.33 %	0 %	66.67 %	Non-Coding
82	NC_016936	GCA	2	6	44066	44071	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_016936	CGA	2	6	44146	44151	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
84	NC_016936	TTA	2	6	46080	46085	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_016936	TAA	2	6	46106	46111	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_016936	AAG	2	6	46113	46118	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_016936	GCT	2	6	46135	46140	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
88	NC_016936	GGC	2	6	46574	46579	0 %	0 %	66.67 %	33.33 %	Non-Coding
89	NC_016936	GCC	2	6	46583	46588	0 %	0 %	33.33 %	66.67 %	Non-Coding
90	NC_016936	GTT	2	6	47460	47465	0 %	66.67 %	33.33 %	0 %	Non-Coding
91	NC_016936	AGC	2	6	47510	47515	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
92	NC_016936	ACT	2	6	47577	47582	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_016936	AGC	2	6	48168	48173	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_016936	AAC	2	6	48174	48179	66.67 %	0 %	0 %	33.33 %	Non-Coding
95	NC_016936	CTT	2	6	48212	48217	0 %	66.67 %	0 %	33.33 %	Non-Coding
96	NC_016936	CAG	2	6	48232	48237	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
97	NC_016936	GCT	2	6	49260	49265	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
98	NC_016936	ACT	2	6	49331	49336	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_016936	GCC	2	6	50531	50536	0 %	0 %	33.33 %	66.67 %	Non-Coding
100	NC_016936	ATC	2	6	50594	50599	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
101	NC_016936	CAG	2	6	50657	50662	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
102	NC_016936	GCC	2	6	50682	50687	0 %	0 %	33.33 %	66.67 %	Non-Coding
103	NC_016936	GGC	2	6	50691	50696	0 %	0 %	66.67 %	33.33 %	Non-Coding
104	NC_016936	CGG	2	6	52812	52817	0 %	0 %	66.67 %	33.33 %	Non-Coding
105	NC_016936	ATC	2	6	52862	52867	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
106	NC_016936	GAT	2	6	52902	52907	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.