MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Sinorhizobium fredii HH103 plasmid pSfHH103a complete sequence

Total Repeats: 38

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016813	GCC	2	6	79	84	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_016813	CAG	2	6	124	129	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3	NC_016813	GCA	2	6	148	153	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_016813	CTC	3	9	494	502	0 %	33.33 %	0 %	66.67 %	Non-Coding
5	NC_016813	GAT	2	6	505	510	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_016813	CAA	2	6	600	605	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_016813	AGA	2	6	698	703	66.67 %	0 %	33.33 %	0 %	Non-Coding
8	NC_016813	CGC	2	6	717	722	0 %	0 %	33.33 %	66.67 %	Non-Coding
9	NC_016813	CCT	2	6	731	736	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_016813	GCG	2	6	747	752	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_016813	GCT	2	6	892	897	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_016813	GCT	2	6	910	915	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_016813	GCT	2	6	921	926	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_016813	TGC	2	6	960	965	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_016813	GTG	2	6	1997	2002	0 %	33.33 %	66.67 %	0 %	Non-Coding
16	NC_016813	CGC	2	6	2077	2082	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_016813	CGG	2	6	2156	2161	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_016813	GCA	2	6	2239	2244	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_016813	CCG	2	6	2276	2281	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_016813	ATC	2	6	2351	2356	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_016813	GTC	2	6	9622	9627	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_016813	TGC	2	6	9803	9808	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_016813	AGG	2	6	13364	13369	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_016813	AGC	2	6	13484	13489	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_016813	CGG	2	6	13571	13576	0 %	0 %	66.67 %	33.33 %	Non-Coding
26	NC_016813	GCA	2	6	13952	13957	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_016813	GTC	2	6	14030	14035	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
28	NC_016813	CTT	2	6	14203	14208	0 %	66.67 %	0 %	33.33 %	Non-Coding
29	NC_016813	ATC	2	6	14225	14230	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_016813	ACA	2	6	17628	17633	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_016813	CAT	2	6	18485	18490	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_016813	TTC	2	6	18503	18508	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_016813	GCT	2	6	18701	18706	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_016813	GAT	2	6	21449	21454	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_016813	TGT	2	6	21505	21510	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_016813	ATG	2	6	22355	22360	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_016813	GGC	2	6	23492	23497	0 %	0 %	66.67 %	33.33 %	Non-Coding
38	NC_016813	CGC	2	6	23856	23861	0 %	0 %	33.33 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.