MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Synechococcus sp. PCC 7002 plasmid pAQ5

Total Repeats: 81

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_010479	GAG	2	6	990	995	33.33 %	0 %	66.67 %	0 %	Non-Coding
2	NC_010479	AGG	2	6	1054	1059	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_010479	TAT	2	6	1116	1121	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_010479	TTG	2	6	1128	1133	0 %	66.67 %	33.33 %	0 %	Non-Coding
5	NC_010479	AGA	2	6	1157	1162	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_010479	TAA	2	6	1168	1173	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_010479	GCT	2	6	1176	1181	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_010479	CGC	2	6	1334	1339	0 %	0 %	33.33 %	66.67 %	Non-Coding
9	NC_010479	GTC	2	6	1414	1419	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_010479	CAC	2	6	1522	1527	33.33 %	0 %	0 %	66.67 %	Non-Coding
11	NC_010479	GCC	2	6	1573	1578	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_010479	CCA	2	6	1602	1607	33.33 %	0 %	0 %	66.67 %	Non-Coding
13	NC_010479	CCG	2	6	1716	1721	0 %	0 %	33.33 %	66.67 %	Non-Coding
14	NC_010479	CCT	2	6	1753	1758	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_010479	GGC	2	6	1859	1864	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_010479	TAG	2	6	1872	1877	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_010479	CTA	2	6	2285	2290	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_010479	AGG	2	6	2557	2562	33.33 %	0 %	66.67 %	0 %	Non-Coding
19	NC_010479	AAC	2	6	2589	2594	66.67 %	0 %	0 %	33.33 %	Non-Coding
20	NC_010479	CCT	2	6	3811	3816	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_010479	TCA	2	6	4909	4914	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_010479	AGC	2	6	5184	5189	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_010479	TCG	2	6	5533	5538	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_010479	TAG	2	6	5540	5545	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_010479	GGA	2	6	6807	6812	33.33 %	0 %	66.67 %	0 %	Non-Coding
26	NC_010479	AGT	2	6	7645	7650	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_010479	CCG	2	6	7689	7694	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_010479	CAT	2	6	7710	7715	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_010479	AAT	2	6	7928	7933	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_010479	ATC	2	6	9445	9450	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_010479	CAT	2	6	9453	9458	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_010479	CCA	2	6	9468	9473	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_010479	GCA	2	6	9572	9577	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_010479	GGA	2	6	10302	10307	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_010479	TAT	2	6	11410	11415	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_010479	AAG	2	6	11627	11632	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_010479	TGA	2	6	11673	11678	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_010479	GCA	2	6	11812	11817	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
39	NC_010479	GAA	2	6	11934	11939	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_010479	AAG	2	6	11960	11965	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_010479	GAC	2	6	13092	13097	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_010479	CCG	2	6	13571	13576	0 %	0 %	33.33 %	66.67 %	Non-Coding
43	NC_010479	CAA	2	6	13621	13626	66.67 %	0 %	0 %	33.33 %	Non-Coding
44	NC_010479	TCT	2	6	15176	15181	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_010479	CGC	2	6	16912	16917	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_010479	TCG	2	6	17624	17629	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_010479	GGT	2	6	17756	17761	0 %	33.33 %	66.67 %	0 %	Non-Coding
48	NC_010479	TGC	2	6	17786	17791	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_010479	TGG	2	6	17821	17826	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_010479	GTT	2	6	17880	17885	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_010479	GTT	2	6	17906	17911	0 %	66.67 %	33.33 %	0 %	Non-Coding
52	NC_010479	CTG	2	6	17912	17917	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_010479	TGC	2	6	18860	18865	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
54	NC_010479	AAC	2	6	18976	18981	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_010479	TAA	2	6	19032	19037	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_010479	AAT	2	6	19108	19113	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_010479	GTT	2	6	19182	19187	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_010479	AAT	2	6	19254	19259	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_010479	GTT	2	6	19315	19320	0 %	66.67 %	33.33 %	0 %	Non-Coding
60	NC_010479	TTA	2	6	26231	26236	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_010479	CTA	2	6	27439	27444	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_010479	ATT	2	6	27633	27638	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_010479	ACT	2	6	27654	27659	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_010479	ATA	2	6	27665	27670	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_010479	CTC	2	6	28567	28572	0 %	33.33 %	0 %	66.67 %	Non-Coding
66	NC_010479	TGA	2	6	28588	28593	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_010479	CAT	2	6	28691	28696	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
68	NC_010479	TAC	2	6	28724	28729	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_010479	ATT	2	6	28824	28829	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_010479	ATT	2	6	28858	28863	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_010479	AAT	2	6	28977	28982	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_010479	TTG	2	6	29140	29145	0 %	66.67 %	33.33 %	0 %	Non-Coding
73	NC_010479	CTT	2	6	29245	29250	0 %	66.67 %	0 %	33.33 %	Non-Coding
74	NC_010479	TGC	2	6	29265	29270	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
75	NC_010479	TCA	2	6	29274	29279	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_010479	TTC	2	6	29381	29386	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_010479	ATT	2	6	29401	29406	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_010479	ACC	2	6	29416	29421	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_010479	ATC	2	6	38255	38260	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_010479	GAG	2	6	38390	38395	33.33 %	0 %	66.67 %	0 %	Non-Coding
81	NC_010479	AGT	2	6	38427	38432	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.