MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Sulfurovum sp. NBC37-1 chromosome

Total Repeats: 93

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009663	ACAATT	2	12	39427	39438	50 %	33.33 %	0 %	16.67 %	Non-Coding
2	NC_009663	ATTGTA	2	12	42584	42595	33.33 %	50 %	16.67 %	0 %	Non-Coding
3	NC_009663	TCTGTC	2	12	43488	43499	0 %	50 %	16.67 %	33.33 %	Non-Coding
4	NC_009663	TTTGTC	2	12	44336	44347	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
5	NC_009663	CGGAAC	2	12	45907	45918	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_009663	AAAGGA	2	12	79913	79924	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_009663	CTCTTT	2	12	165156	165167	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_009663	GGGGAT	2	12	168315	168326	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
9	NC_009663	AGTAAA	2	12	175030	175041	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
10	NC_009663	ATTCAA	2	12	193333	193344	50 %	33.33 %	0 %	16.67 %	Non-Coding
11	NC_009663	GATATC	2	12	193680	193691	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
12	NC_009663	TTTTTG	2	12	239793	239804	0 %	83.33 %	16.67 %	0 %	Non-Coding
13	NC_009663	AACTGT	2	12	326483	326494	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
14	NC_009663	TAGTTA	2	12	376685	376696	33.33 %	50 %	16.67 %	0 %	Non-Coding
15	NC_009663	ATTTAG	2	12	387220	387231	33.33 %	50 %	16.67 %	0 %	Non-Coding
16	NC_009663	CTATAG	2	12	408714	408725	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
17	NC_009663	TTTGTT	2	12	432775	432786	0 %	83.33 %	16.67 %	0 %	Non-Coding
18	NC_009663	TCCATA	2	12	471913	471924	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_009663	CTGTCC	2	12	495539	495550	0 %	33.33 %	16.67 %	50 %	Non-Coding
20	NC_009663	ACAATT	2	12	558385	558396	50 %	33.33 %	0 %	16.67 %	Non-Coding
21	NC_009663	ATTGTA	2	12	561542	561553	33.33 %	50 %	16.67 %	0 %	Non-Coding
22	NC_009663	TTTCTT	2	12	628531	628542	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_009663	TTTCCA	2	12	634034	634045	16.67 %	50 %	0 %	33.33 %	Non-Coding
24	NC_009663	TTTTTA	2	12	639945	639956	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_009663	GACAAC	2	12	689877	689888	50 %	0 %	16.67 %	33.33 %	Non-Coding
26	NC_009663	AGAAAT	2	12	698878	698889	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
27	NC_009663	AAAAAG	2	12	766673	766684	83.33 %	0 %	16.67 %	0 %	Non-Coding
28	NC_009663	ACTTAT	2	12	784242	784253	33.33 %	50 %	0 %	16.67 %	Non-Coding
29	NC_009663	CTTTTT	2	12	799930	799941	0 %	83.33 %	0 %	16.67 %	Non-Coding
30	NC_009663	TGATAA	2	12	833208	833219	50 %	33.33 %	16.67 %	0 %	Non-Coding
31	NC_009663	TGAAAA	2	12	846861	846872	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
32	NC_009663	AAAATT	2	12	855916	855927	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_009663	TAAACA	2	12	856139	856150	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
34	NC_009663	TCCCTC	2	12	868050	868061	0 %	33.33 %	0 %	66.67 %	Non-Coding
35	NC_009663	TGAAAC	2	12	905185	905196	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
36	NC_009663	ATTGGA	2	12	915341	915352	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_009663	AAATAT	2	12	949874	949885	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_009663	GGACAC	2	12	1006729	1006740	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
39	NC_009663	CAGGAA	2	12	1083677	1083688	50 %	0 %	33.33 %	16.67 %	Non-Coding
40	NC_009663	GAATGT	2	12	1115319	1115330	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_009663	TTATTG	2	12	1159188	1159199	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
42	NC_009663	ACTGTA	2	12	1170305	1170316	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
43	NC_009663	ATTTTC	2	12	1184767	1184778	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
44	NC_009663	AAAAAG	2	12	1239235	1239246	83.33 %	0 %	16.67 %	0 %	Non-Coding
45	NC_009663	GACAAC	2	12	1339741	1339752	50 %	0 %	16.67 %	33.33 %	Non-Coding
46	NC_009663	CTTTTT	2	12	1356861	1356872	0 %	83.33 %	0 %	16.67 %	Non-Coding
47	NC_009663	CTTCAG	2	12	1357060	1357071	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
48	NC_009663	ATTTCT	2	12	1359899	1359910	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
49	NC_009663	TTAAAA	2	12	1374713	1374724	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_009663	ACGTTT	2	12	1429721	1429732	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
51	NC_009663	TTGAAG	2	12	1435569	1435580	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_009663	AAAGAT	2	12	1435834	1435845	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
53	NC_009663	GCTAGG	2	12	1554435	1554446	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
54	NC_009663	TTTACA	2	12	1565341	1565352	33.33 %	50 %	0 %	16.67 %	Non-Coding
55	NC_009663	ATATAA	2	12	1566864	1566875	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_009663	GCTTCA	2	12	1605200	1605211	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
57	NC_009663	GTCAAT	2	12	1617434	1617445	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
58	NC_009663	TTTTGG	2	12	1646654	1646665	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_009663	CCTAGC	2	12	1652669	1652680	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
60	NC_009663	TTATAT	2	12	1660400	1660411	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_009663	TTTTTC	2	12	1706650	1706661	0 %	83.33 %	0 %	16.67 %	Non-Coding
62	NC_009663	TAAACT	2	12	1723101	1723112	50 %	33.33 %	0 %	16.67 %	Non-Coding
63	NC_009663	TTTTCT	2	12	1788834	1788845	0 %	83.33 %	0 %	16.67 %	Non-Coding
64	NC_009663	ACTGCT	2	12	1836486	1836497	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
65	NC_009663	TTTTAT	2	12	1930107	1930118	16.67 %	83.33 %	0 %	0 %	Non-Coding
66	NC_009663	TCTATT	2	12	2003494	2003505	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
67	NC_009663	TTATCT	2	12	2003706	2003717	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
68	NC_009663	AAAAAG	2	12	2003831	2003842	83.33 %	0 %	16.67 %	0 %	Non-Coding
69	NC_009663	ATATTT	2	12	2016329	2016340	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_009663	AAAATT	2	12	2034870	2034881	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_009663	CTTTTT	2	12	2081894	2081905	0 %	83.33 %	0 %	16.67 %	Non-Coding
72	NC_009663	TTTTAT	2	12	2095289	2095300	16.67 %	83.33 %	0 %	0 %	Non-Coding
73	NC_009663	TATTTG	2	12	2105101	2105112	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
74	NC_009663	AGAGTA	2	12	2131832	2131843	50 %	16.67 %	33.33 %	0 %	Non-Coding
75	NC_009663	CTTTTT	2	12	2184493	2184504	0 %	83.33 %	0 %	16.67 %	Non-Coding
76	NC_009663	GGACAC	2	12	2332368	2332379	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_009663	TTTTCT	2	12	2342522	2342533	0 %	83.33 %	0 %	16.67 %	Non-Coding
78	NC_009663	ATATTT	2	12	2342890	2342901	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_009663	TTTCTT	2	12	2345722	2345733	0 %	83.33 %	0 %	16.67 %	Non-Coding
80	NC_009663	TACAAT	2	12	2391129	2391140	50 %	33.33 %	0 %	16.67 %	Non-Coding
81	NC_009663	AATTGT	2	12	2394286	2394297	33.33 %	50 %	16.67 %	0 %	Non-Coding
82	NC_009663	ATAGTT	2	12	2400473	2400484	33.33 %	50 %	16.67 %	0 %	Non-Coding
83	NC_009663	AAAATA	2	12	2402378	2402389	83.33 %	16.67 %	0 %	0 %	Non-Coding
84	NC_009663	TGTTTG	2	12	2403697	2403708	0 %	66.67 %	33.33 %	0 %	Non-Coding
85	NC_009663	ATAAGT	2	12	2480248	2480259	50 %	33.33 %	16.67 %	0 %	Non-Coding
86	NC_009663	TTATAT	2	12	2511257	2511268	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_009663	ATTCTC	2	12	2521077	2521088	16.67 %	50 %	0 %	33.33 %	Non-Coding
88	NC_009663	CTTAAT	2	12	2536622	2536633	33.33 %	50 %	0 %	16.67 %	Non-Coding
89	NC_009663	CTTAAA	2	12	2540778	2540789	50 %	33.33 %	0 %	16.67 %	Non-Coding
90	NC_009663	AAAAAG	2	12	2544366	2544377	83.33 %	0 %	16.67 %	0 %	Non-Coding
91	NC_009663	TTTTAC	2	12	2545638	2545649	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
92	NC_009663	CAAAAA	2	12	2545769	2545780	83.33 %	0 %	0 %	16.67 %	Non-Coding
93	NC_009663	TTGGTC	2	12	2556782	2556793	0 %	50 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.