MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Staphylococcus aureus subsp. aureus str. Newman chromosome

Total Repeats: 12636

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
12501	NC_009641	TTA	2	6	2846925	2846930	33.33 %	66.67 %	0 %	0 %	Non-Coding
12502	NC_009641	TAT	2	6	2848083	2848088	33.33 %	66.67 %	0 %	0 %	Non-Coding
12503	NC_009641	TAT	2	6	2848107	2848112	33.33 %	66.67 %	0 %	0 %	Non-Coding
12504	NC_009641	ATTTTA	2	12	2848144	2848155	33.33 %	66.67 %	0 %	0 %	Non-Coding
12505	NC_009641	T	6	6	2848156	2848161	0 %	100 %	0 %	0 %	Non-Coding
12506	NC_009641	CTATTT	2	12	2848692	2848703	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
12507	NC_009641	AT	3	6	2851268	2851273	50 %	50 %	0 %	0 %	Non-Coding
12508	NC_009641	CAA	2	6	2851308	2851313	66.67 %	0 %	0 %	33.33 %	Non-Coding
12509	NC_009641	A	6	6	2851892	2851897	100 %	0 %	0 %	0 %	Non-Coding
12510	NC_009641	CCT	2	6	2852757	2852762	0 %	33.33 %	0 %	66.67 %	Non-Coding
12511	NC_009641	T	7	7	2852762	2852768	0 %	100 %	0 %	0 %	Non-Coding
12512	NC_009641	A	7	7	2852777	2852783	100 %	0 %	0 %	0 %	Non-Coding
12513	NC_009641	TAT	2	6	2852784	2852789	33.33 %	66.67 %	0 %	0 %	Non-Coding
12514	NC_009641	TAG	2	6	2852866	2852871	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12515	NC_009641	ATA	3	9	2852886	2852894	66.67 %	33.33 %	0 %	0 %	Non-Coding
12516	NC_009641	CTT	2	6	2852938	2852943	0 %	66.67 %	0 %	33.33 %	Non-Coding
12517	NC_009641	AATT	2	8	2852952	2852959	50 %	50 %	0 %	0 %	Non-Coding
12518	NC_009641	GTG	2	6	2852980	2852985	0 %	33.33 %	66.67 %	0 %	Non-Coding
12519	NC_009641	ATTCGA	2	12	2853022	2853033	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
12520	NC_009641	T	6	6	2853055	2853060	0 %	100 %	0 %	0 %	Non-Coding
12521	NC_009641	GGT	2	6	2853062	2853067	0 %	33.33 %	66.67 %	0 %	Non-Coding
12522	NC_009641	TGTA	2	8	2853070	2853077	25 %	50 %	25 %	0 %	Non-Coding
12523	NC_009641	A	6	6	2853088	2853093	100 %	0 %	0 %	0 %	Non-Coding
12524	NC_009641	AT	4	8	2853673	2853680	50 %	50 %	0 %	0 %	Non-Coding
12525	NC_009641	ATC	2	6	2853697	2853702	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12526	NC_009641	AGGT	2	8	2853785	2853792	25 %	25 %	50 %	0 %	Non-Coding
12527	NC_009641	TTTCA	2	10	2854778	2854787	20 %	60 %	0 %	20 %	Non-Coding
12528	NC_009641	ATTTT	2	10	2854804	2854813	20 %	80 %	0 %	0 %	Non-Coding
12529	NC_009641	ATCT	2	8	2854851	2854858	25 %	50 %	0 %	25 %	Non-Coding
12530	NC_009641	ATG	2	6	2854923	2854928	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12531	NC_009641	TTAA	2	8	2855968	2855975	50 %	50 %	0 %	0 %	Non-Coding
12532	NC_009641	T	6	6	2856030	2856035	0 %	100 %	0 %	0 %	Non-Coding
12533	NC_009641	CATA	2	8	2856041	2856048	50 %	25 %	0 %	25 %	Non-Coding
12534	NC_009641	TAAAT	2	10	2856083	2856092	60 %	40 %	0 %	0 %	Non-Coding
12535	NC_009641	CAAA	2	8	2856767	2856774	75 %	0 %	0 %	25 %	Non-Coding
12536	NC_009641	GAT	2	6	2856820	2856825	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12537	NC_009641	ATG	2	6	2856846	2856851	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12538	NC_009641	CTA	2	6	2857979	2857984	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12539	NC_009641	ATA	2	6	2857991	2857996	66.67 %	33.33 %	0 %	0 %	Non-Coding
12540	NC_009641	GTT	2	6	2858045	2858050	0 %	66.67 %	33.33 %	0 %	Non-Coding
12541	NC_009641	AAC	2	6	2858072	2858077	66.67 %	0 %	0 %	33.33 %	Non-Coding
12542	NC_009641	TATTT	2	10	2858108	2858117	20 %	80 %	0 %	0 %	Non-Coding
12543	NC_009641	TTA	2	6	2858609	2858614	33.33 %	66.67 %	0 %	0 %	Non-Coding
12544	NC_009641	AAC	2	6	2858621	2858626	66.67 %	0 %	0 %	33.33 %	Non-Coding
12545	NC_009641	T	6	6	2858638	2858643	0 %	100 %	0 %	0 %	Non-Coding
12546	NC_009641	T	6	6	2858662	2858667	0 %	100 %	0 %	0 %	Non-Coding
12547	NC_009641	TAA	2	6	2858673	2858678	66.67 %	33.33 %	0 %	0 %	Non-Coding
12548	NC_009641	TTC	2	6	2858695	2858700	0 %	66.67 %	0 %	33.33 %	Non-Coding
12549	NC_009641	AAT	2	6	2858715	2858720	66.67 %	33.33 %	0 %	0 %	Non-Coding
12550	NC_009641	TTAAT	2	10	2858737	2858746	40 %	60 %	0 %	0 %	Non-Coding
12551	NC_009641	ATT	2	6	2858757	2858762	33.33 %	66.67 %	0 %	0 %	Non-Coding
12552	NC_009641	AGAA	2	8	2858818	2858825	75 %	0 %	25 %	0 %	Non-Coding
12553	NC_009641	ATC	2	6	2860485	2860490	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12554	NC_009641	A	6	6	2860495	2860500	100 %	0 %	0 %	0 %	Non-Coding
12555	NC_009641	CA	3	6	2860595	2860600	50 %	0 %	0 %	50 %	Non-Coding
12556	NC_009641	TCA	2	6	2860616	2860621	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12557	NC_009641	CCT	2	6	2861585	2861590	0 %	33.33 %	0 %	66.67 %	Non-Coding
12558	NC_009641	TAA	2	6	2861654	2861659	66.67 %	33.33 %	0 %	0 %	Non-Coding
12559	NC_009641	ACCA	2	8	2861706	2861713	50 %	0 %	0 %	50 %	Non-Coding
12560	NC_009641	AAT	2	6	2861735	2861740	66.67 %	33.33 %	0 %	0 %	Non-Coding
12561	NC_009641	ACA	2	6	2861780	2861785	66.67 %	0 %	0 %	33.33 %	Non-Coding
12562	NC_009641	GGAT	2	8	2861790	2861797	25 %	25 %	50 %	0 %	Non-Coding
12563	NC_009641	TA	4	8	2862388	2862395	50 %	50 %	0 %	0 %	Non-Coding
12564	NC_009641	A	6	6	2862400	2862405	100 %	0 %	0 %	0 %	Non-Coding
12565	NC_009641	TA	3	6	2862431	2862436	50 %	50 %	0 %	0 %	Non-Coding
12566	NC_009641	AAT	2	6	2862440	2862445	66.67 %	33.33 %	0 %	0 %	Non-Coding
12567	NC_009641	TTA	2	6	2862475	2862480	33.33 %	66.67 %	0 %	0 %	Non-Coding
12568	NC_009641	TTG	2	6	2863587	2863592	0 %	66.67 %	33.33 %	0 %	Non-Coding
12569	NC_009641	CTT	2	6	2863614	2863619	0 %	66.67 %	0 %	33.33 %	Non-Coding
12570	NC_009641	AGT	2	6	2863638	2863643	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12571	NC_009641	AGG	2	6	2863785	2863790	33.33 %	0 %	66.67 %	0 %	Non-Coding
12572	NC_009641	CTTA	2	8	2864623	2864630	25 %	50 %	0 %	25 %	Non-Coding
12573	NC_009641	GTAG	2	8	2864633	2864640	25 %	25 %	50 %	0 %	Non-Coding
12574	NC_009641	T	6	6	2864647	2864652	0 %	100 %	0 %	0 %	Non-Coding
12575	NC_009641	ACA	2	6	2864666	2864671	66.67 %	0 %	0 %	33.33 %	Non-Coding
12576	NC_009641	CTT	2	6	2864704	2864709	0 %	66.67 %	0 %	33.33 %	Non-Coding
12577	NC_009641	CAAT	2	8	2865244	2865251	50 %	25 %	0 %	25 %	Non-Coding
12578	NC_009641	A	6	6	2865285	2865290	100 %	0 %	0 %	0 %	Non-Coding
12579	NC_009641	TAT	2	6	2865293	2865298	33.33 %	66.67 %	0 %	0 %	Non-Coding
12580	NC_009641	AAT	2	6	2865301	2865306	66.67 %	33.33 %	0 %	0 %	Non-Coding
12581	NC_009641	CAT	2	6	2865335	2865340	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12582	NC_009641	CTCA	2	8	2865392	2865399	25 %	25 %	0 %	50 %	Non-Coding
12583	NC_009641	CTA	2	6	2865405	2865410	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12584	NC_009641	TTCA	2	8	2865439	2865446	25 %	50 %	0 %	25 %	Non-Coding
12585	NC_009641	CTA	2	6	2865471	2865476	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12586	NC_009641	ATT	2	6	2865485	2865490	33.33 %	66.67 %	0 %	0 %	Non-Coding
12587	NC_009641	GA	3	6	2868232	2868237	50 %	0 %	50 %	0 %	Non-Coding
12588	NC_009641	A	6	6	2868993	2868998	100 %	0 %	0 %	0 %	Non-Coding
12589	NC_009641	CTT	2	6	2869583	2869588	0 %	66.67 %	0 %	33.33 %	Non-Coding
12590	NC_009641	A	6	6	2869979	2869984	100 %	0 %	0 %	0 %	Non-Coding
12591	NC_009641	GA	3	6	2869986	2869991	50 %	0 %	50 %	0 %	Non-Coding
12592	NC_009641	CAA	2	6	2870246	2870251	66.67 %	0 %	0 %	33.33 %	Non-Coding
12593	NC_009641	GCT	2	6	2870264	2870269	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12594	NC_009641	T	6	6	2870272	2870277	0 %	100 %	0 %	0 %	Non-Coding
12595	NC_009641	ATC	2	6	2870294	2870299	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12596	NC_009641	T	7	7	2870354	2870360	0 %	100 %	0 %	0 %	Non-Coding
12597	NC_009641	T	6	6	2870409	2870414	0 %	100 %	0 %	0 %	Non-Coding
12598	NC_009641	ATTT	2	8	2870416	2870423	25 %	75 %	0 %	0 %	Non-Coding
12599	NC_009641	A	6	6	2870426	2870431	100 %	0 %	0 %	0 %	Non-Coding
12600	NC_009641	TAA	2	6	2870474	2870479	66.67 %	33.33 %	0 %	0 %	Non-Coding
12601	NC_009641	T	6	6	2870524	2870529	0 %	100 %	0 %	0 %	Non-Coding
12602	NC_009641	ACA	2	6	2870788	2870793	66.67 %	0 %	0 %	33.33 %	Non-Coding
12603	NC_009641	CAA	2	6	2870830	2870835	66.67 %	0 %	0 %	33.33 %	Non-Coding
12604	NC_009641	TTG	2	6	2870847	2870852	0 %	66.67 %	33.33 %	0 %	Non-Coding
12605	NC_009641	T	7	7	2870856	2870862	0 %	100 %	0 %	0 %	Non-Coding
12606	NC_009641	ATA	2	6	2870875	2870880	66.67 %	33.33 %	0 %	0 %	Non-Coding
12607	NC_009641	ATA	2	6	2870884	2870889	66.67 %	33.33 %	0 %	0 %	Non-Coding
12608	NC_009641	GAT	2	6	2870904	2870909	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12609	NC_009641	ACA	2	6	2871581	2871586	66.67 %	0 %	0 %	33.33 %	Non-Coding
12610	NC_009641	AGAC	2	8	2871609	2871616	50 %	0 %	25 %	25 %	Non-Coding
12611	NC_009641	TTA	2	6	2871666	2871671	33.33 %	66.67 %	0 %	0 %	Non-Coding
12612	NC_009641	ATG	2	6	2871672	2871677	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12613	NC_009641	AAT	2	6	2872149	2872154	66.67 %	33.33 %	0 %	0 %	Non-Coding
12614	NC_009641	TTA	2	6	2872155	2872160	33.33 %	66.67 %	0 %	0 %	Non-Coding
12615	NC_009641	TAA	2	6	2872163	2872168	66.67 %	33.33 %	0 %	0 %	Non-Coding
12616	NC_009641	TAAT	2	8	2872574	2872581	50 %	50 %	0 %	0 %	Non-Coding
12617	NC_009641	CA	3	6	2872602	2872607	50 %	0 %	0 %	50 %	Non-Coding
12618	NC_009641	ATTT	2	8	2872759	2872766	25 %	75 %	0 %	0 %	Non-Coding
12619	NC_009641	CGT	2	6	2872767	2872772	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12620	NC_009641	A	6	6	2872801	2872806	100 %	0 %	0 %	0 %	Non-Coding
12621	NC_009641	ACT	2	6	2872837	2872842	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12622	NC_009641	ATATAA	2	12	2872898	2872909	66.67 %	33.33 %	0 %	0 %	Non-Coding
12623	NC_009641	A	10	10	2872932	2872941	100 %	0 %	0 %	0 %	Non-Coding
12624	NC_009641	TCA	2	6	2872984	2872989	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12625	NC_009641	CCT	2	6	2876496	2876501	0 %	33.33 %	0 %	66.67 %	Non-Coding
12626	NC_009641	CTT	2	6	2876521	2876526	0 %	66.67 %	0 %	33.33 %	Non-Coding
12627	NC_009641	CCT	2	6	2877945	2877950	0 %	33.33 %	0 %	66.67 %	Non-Coding
12628	NC_009641	TTA	2	6	2877980	2877985	33.33 %	66.67 %	0 %	0 %	Non-Coding
12629	NC_009641	TTCC	2	8	2878052	2878059	0 %	50 %	0 %	50 %	Non-Coding
12630	NC_009641	TTAT	2	8	2878433	2878440	25 %	75 %	0 %	0 %	Non-Coding
12631	NC_009641	TATT	2	8	2878495	2878502	25 %	75 %	0 %	0 %	Non-Coding
12632	NC_009641	A	8	8	2878516	2878523	100 %	0 %	0 %	0 %	Non-Coding
12633	NC_009641	TGA	2	6	2878530	2878535	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12634	NC_009641	ACT	2	6	2878823	2878828	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12635	NC_009641	TAC	2	6	2878870	2878875	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12636	NC_009641	T	7	7	2878883	2878889	0 %	100 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.