MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Sinorhizobium medicae WSM419 plasmid pSMED01

Total Repeats: 3621

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
3501	NC_009620	TGAG	2	8	1542790	1542797	25 %	25 %	50 %	0 %	Non-Coding
3502	NC_009620	ACG	2	6	1542802	1542807	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3503	NC_009620	GC	3	6	1544463	1544468	0 %	0 %	50 %	50 %	Non-Coding
3504	NC_009620	CT	3	6	1544508	1544513	0 %	50 %	0 %	50 %	Non-Coding
3505	NC_009620	GAG	2	6	1545591	1545596	33.33 %	0 %	66.67 %	0 %	Non-Coding
3506	NC_009620	TGC	2	6	1547488	1547493	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3507	NC_009620	CTT	2	6	1547497	1547502	0 %	66.67 %	0 %	33.33 %	Non-Coding
3508	NC_009620	ACG	2	6	1547641	1547646	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3509	NC_009620	CG	3	6	1547656	1547661	0 %	0 %	50 %	50 %	Non-Coding
3510	NC_009620	ACGC	2	8	1547698	1547705	25 %	0 %	25 %	50 %	Non-Coding
3511	NC_009620	GCC	2	6	1547787	1547792	0 %	0 %	33.33 %	66.67 %	Non-Coding
3512	NC_009620	AGC	2	6	1547806	1547811	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3513	NC_009620	TCTGG	2	10	1547913	1547922	0 %	40 %	40 %	20 %	Non-Coding
3514	NC_009620	CCA	2	6	1547923	1547928	33.33 %	0 %	0 %	66.67 %	Non-Coding
3515	NC_009620	TCA	2	6	1547929	1547934	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3516	NC_009620	T	6	6	1547952	1547957	0 %	100 %	0 %	0 %	Non-Coding
3517	NC_009620	CGC	2	6	1548251	1548256	0 %	0 %	33.33 %	66.67 %	Non-Coding
3518	NC_009620	CCG	2	6	1548285	1548290	0 %	0 %	33.33 %	66.67 %	Non-Coding
3519	NC_009620	CGG	2	6	1548291	1548296	0 %	0 %	66.67 %	33.33 %	Non-Coding
3520	NC_009620	CG	3	6	1548767	1548772	0 %	0 %	50 %	50 %	Non-Coding
3521	NC_009620	TC	3	6	1548788	1548793	0 %	50 %	0 %	50 %	Non-Coding
3522	NC_009620	CCT	2	6	1548808	1548813	0 %	33.33 %	0 %	66.67 %	Non-Coding
3523	NC_009620	CAAC	2	8	1551897	1551904	50 %	0 %	0 %	50 %	Non-Coding
3524	NC_009620	CA	3	6	1551913	1551918	50 %	0 %	0 %	50 %	Non-Coding
3525	NC_009620	CGGC	2	8	1552714	1552721	0 %	0 %	50 %	50 %	Non-Coding
3526	NC_009620	TC	3	6	1552814	1552819	0 %	50 %	0 %	50 %	Non-Coding
3527	NC_009620	T	7	7	1552864	1552870	0 %	100 %	0 %	0 %	Non-Coding
3528	NC_009620	GAAA	2	8	1552882	1552889	75 %	0 %	25 %	0 %	Non-Coding
3529	NC_009620	GCCTGG	2	12	1552919	1552930	0 %	16.67 %	50 %	33.33 %	Non-Coding
3530	NC_009620	CCCA	2	8	1552988	1552995	25 %	0 %	0 %	75 %	Non-Coding
3531	NC_009620	AAG	2	6	1554180	1554185	66.67 %	0 %	33.33 %	0 %	Non-Coding
3532	NC_009620	TAC	2	6	1554296	1554301	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3533	NC_009620	TC	3	6	1554345	1554350	0 %	50 %	0 %	50 %	Non-Coding
3534	NC_009620	TCGG	2	8	1554628	1554635	0 %	25 %	50 %	25 %	Non-Coding
3535	NC_009620	CGA	2	6	1554657	1554662	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3536	NC_009620	AGC	2	6	1554863	1554868	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3537	NC_009620	CCG	2	6	1554927	1554932	0 %	0 %	33.33 %	66.67 %	Non-Coding
3538	NC_009620	TCG	2	6	1555111	1555116	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3539	NC_009620	GCC	2	6	1555128	1555133	0 %	0 %	33.33 %	66.67 %	Non-Coding
3540	NC_009620	GC	3	6	1555239	1555244	0 %	0 %	50 %	50 %	Non-Coding
3541	NC_009620	CG	3	6	1555464	1555469	0 %	0 %	50 %	50 %	Non-Coding
3542	NC_009620	TTC	2	6	1556241	1556246	0 %	66.67 %	0 %	33.33 %	Non-Coding
3543	NC_009620	GCG	2	6	1556590	1556595	0 %	0 %	66.67 %	33.33 %	Non-Coding
3544	NC_009620	A	6	6	1556617	1556622	100 %	0 %	0 %	0 %	Non-Coding
3545	NC_009620	GCG	2	6	1561785	1561790	0 %	0 %	66.67 %	33.33 %	Non-Coding
3546	NC_009620	CGCA	2	8	1561843	1561850	25 %	0 %	25 %	50 %	Non-Coding
3547	NC_009620	CGG	2	6	1563116	1563121	0 %	0 %	66.67 %	33.33 %	Non-Coding
3548	NC_009620	GCC	2	6	1563135	1563140	0 %	0 %	33.33 %	66.67 %	Non-Coding
3549	NC_009620	GTT	2	6	1563151	1563156	0 %	66.67 %	33.33 %	0 %	Non-Coding
3550	NC_009620	CGG	2	6	1563175	1563180	0 %	0 %	66.67 %	33.33 %	Non-Coding
3551	NC_009620	CGC	2	6	1564480	1564485	0 %	0 %	33.33 %	66.67 %	Non-Coding
3552	NC_009620	CGG	2	6	1564575	1564580	0 %	0 %	66.67 %	33.33 %	Non-Coding
3553	NC_009620	GCG	2	6	1564621	1564626	0 %	0 %	66.67 %	33.33 %	Non-Coding
3554	NC_009620	GAGCG	2	10	1564636	1564645	20 %	0 %	60 %	20 %	Non-Coding
3555	NC_009620	GTT	2	6	1564974	1564979	0 %	66.67 %	33.33 %	0 %	Non-Coding
3556	NC_009620	GCC	2	6	1564984	1564989	0 %	0 %	33.33 %	66.67 %	Non-Coding
3557	NC_009620	GCGA	2	8	1565055	1565062	25 %	0 %	50 %	25 %	Non-Coding
3558	NC_009620	CGG	2	6	1565067	1565072	0 %	0 %	66.67 %	33.33 %	Non-Coding
3559	NC_009620	TTG	2	6	1565082	1565087	0 %	66.67 %	33.33 %	0 %	Non-Coding
3560	NC_009620	GAA	2	6	1565119	1565124	66.67 %	0 %	33.33 %	0 %	Non-Coding
3561	NC_009620	CGG	2	6	1565128	1565133	0 %	0 %	66.67 %	33.33 %	Non-Coding
3562	NC_009620	CCGGT	2	10	1565152	1565161	0 %	20 %	40 %	40 %	Non-Coding
3563	NC_009620	AG	3	6	1565178	1565183	50 %	0 %	50 %	0 %	Non-Coding
3564	NC_009620	CAG	2	6	1565209	1565214	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3565	NC_009620	ACG	2	6	1565218	1565223	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3566	NC_009620	TGAT	2	8	1565224	1565231	25 %	50 %	25 %	0 %	Non-Coding
3567	NC_009620	CTC	2	6	1565238	1565243	0 %	33.33 %	0 %	66.67 %	Non-Coding
3568	NC_009620	GCC	2	6	1565259	1565264	0 %	0 %	33.33 %	66.67 %	Non-Coding
3569	NC_009620	GGCA	2	8	1565307	1565314	25 %	0 %	50 %	25 %	Non-Coding
3570	NC_009620	CAT	2	6	1565422	1565427	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3571	NC_009620	GCG	2	6	1565608	1565613	0 %	0 %	66.67 %	33.33 %	Non-Coding
3572	NC_009620	GCG	2	6	1565643	1565648	0 %	0 %	66.67 %	33.33 %	Non-Coding
3573	NC_009620	CG	3	6	1565688	1565693	0 %	0 %	50 %	50 %	Non-Coding
3574	NC_009620	TGG	2	6	1565730	1565735	0 %	33.33 %	66.67 %	0 %	Non-Coding
3575	NC_009620	GCGG	2	8	1565750	1565757	0 %	0 %	75 %	25 %	Non-Coding
3576	NC_009620	TCC	2	6	1565775	1565780	0 %	33.33 %	0 %	66.67 %	Non-Coding
3577	NC_009620	AAGC	2	8	1565790	1565797	50 %	0 %	25 %	25 %	Non-Coding
3578	NC_009620	GCA	2	6	1565856	1565861	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3579	NC_009620	GC	3	6	1565894	1565899	0 %	0 %	50 %	50 %	Non-Coding
3580	NC_009620	CGT	2	6	1565923	1565928	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3581	NC_009620	CG	3	6	1565950	1565955	0 %	0 %	50 %	50 %	Non-Coding
3582	NC_009620	GTC	2	6	1566059	1566064	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3583	NC_009620	GCA	2	6	1566120	1566125	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3584	NC_009620	GCA	2	6	1566147	1566152	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3585	NC_009620	AC	3	6	1566202	1566207	50 %	0 %	0 %	50 %	Non-Coding
3586	NC_009620	CGA	2	6	1566300	1566305	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3587	NC_009620	GAC	2	6	1566349	1566354	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3588	NC_009620	GCC	2	6	1566356	1566361	0 %	0 %	33.33 %	66.67 %	Non-Coding
3589	NC_009620	CGG	2	6	1566494	1566499	0 %	0 %	66.67 %	33.33 %	Non-Coding
3590	NC_009620	CAC	2	6	1566534	1566539	33.33 %	0 %	0 %	66.67 %	Non-Coding
3591	NC_009620	TGT	2	6	1566804	1566809	0 %	66.67 %	33.33 %	0 %	Non-Coding
3592	NC_009620	TGG	2	6	1566823	1566828	0 %	33.33 %	66.67 %	0 %	Non-Coding
3593	NC_009620	GCG	2	6	1566834	1566839	0 %	0 %	66.67 %	33.33 %	Non-Coding
3594	NC_009620	GAT	2	6	1566845	1566850	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3595	NC_009620	GCG	2	6	1566861	1566866	0 %	0 %	66.67 %	33.33 %	Non-Coding
3596	NC_009620	GAG	2	6	1566881	1566886	33.33 %	0 %	66.67 %	0 %	Non-Coding
3597	NC_009620	ATCA	2	8	1566893	1566900	50 %	25 %	0 %	25 %	Non-Coding
3598	NC_009620	CGT	2	6	1566901	1566906	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3599	NC_009620	CTG	2	6	1566910	1566915	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3600	NC_009620	CGC	2	6	1566917	1566922	0 %	0 %	33.33 %	66.67 %	Non-Coding
3601	NC_009620	CT	3	6	1566941	1566946	0 %	50 %	0 %	50 %	Non-Coding
3602	NC_009620	ACCGG	2	10	1566963	1566972	20 %	0 %	40 %	40 %	Non-Coding
3603	NC_009620	CCG	2	6	1566991	1566996	0 %	0 %	33.33 %	66.67 %	Non-Coding
3604	NC_009620	CTT	2	6	1566999	1567004	0 %	66.67 %	0 %	33.33 %	Non-Coding
3605	NC_009620	CAA	2	6	1567037	1567042	66.67 %	0 %	0 %	33.33 %	Non-Coding
3606	NC_009620	GCC	2	6	1567051	1567056	0 %	0 %	33.33 %	66.67 %	Non-Coding
3607	NC_009620	TCGC	2	8	1567062	1567069	0 %	25 %	25 %	50 %	Non-Coding
3608	NC_009620	GGC	2	6	1567135	1567140	0 %	0 %	66.67 %	33.33 %	Non-Coding
3609	NC_009620	AAC	2	6	1567145	1567150	66.67 %	0 %	0 %	33.33 %	Non-Coding
3610	NC_009620	CGC	2	6	1567488	1567493	0 %	0 %	33.33 %	66.67 %	Non-Coding
3611	NC_009620	CT	3	6	1567588	1567593	0 %	50 %	0 %	50 %	Non-Coding
3612	NC_009620	TCTT	2	8	1568057	1568064	0 %	75 %	0 %	25 %	Non-Coding
3613	NC_009620	CTC	2	6	1568073	1568078	0 %	33.33 %	0 %	66.67 %	Non-Coding
3614	NC_009620	AAT	2	6	1568152	1568157	66.67 %	33.33 %	0 %	0 %	Non-Coding
3615	NC_009620	GTT	2	6	1568196	1568201	0 %	66.67 %	33.33 %	0 %	Non-Coding
3616	NC_009620	GC	3	6	1568257	1568262	0 %	0 %	50 %	50 %	Non-Coding
3617	NC_009620	AGCG	2	8	1568278	1568285	25 %	0 %	50 %	25 %	Non-Coding
3618	NC_009620	GGC	2	6	1568286	1568291	0 %	0 %	66.67 %	33.33 %	Non-Coding
3619	NC_009620	TCA	2	6	1568303	1568308	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3620	NC_009620	TCG	2	6	1569934	1569939	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3621	NC_009620	GTCT	2	8	1570896	1570903	0 %	50 %	25 %	25 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.