MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Shigella sonnei Ss046 chromosome

Total Repeats: 19064

< Previous12...27282930313233343536373839Next >

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
19001	NC_007384	CAA	2	6	4796977	4796982	66.67 %	0 %	0 %	33.33 %	Non-Coding
19002	NC_007384	GCA	2	6	4798866	4798871	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19003	NC_007384	CGC	2	6	4798966	4798971	0 %	0 %	33.33 %	66.67 %	Non-Coding
19004	NC_007384	CGC	2	6	4799067	4799072	0 %	0 %	33.33 %	66.67 %	Non-Coding
19005	NC_007384	CGC	2	6	4799168	4799173	0 %	0 %	33.33 %	66.67 %	Non-Coding
19006	NC_007384	CGC	2	6	4799268	4799273	0 %	0 %	33.33 %	66.67 %	Non-Coding
19007	NC_007384	AAG	2	6	4801791	4801796	66.67 %	0 %	33.33 %	0 %	Non-Coding
19008	NC_007384	CCA	2	6	4801831	4801836	33.33 %	0 %	0 %	66.67 %	Non-Coding
19009	NC_007384	CATT	2	8	4801843	4801850	25 %	50 %	0 %	25 %	Non-Coding
19010	NC_007384	ATT	2	6	4801860	4801865	33.33 %	66.67 %	0 %	0 %	Non-Coding
19011	NC_007384	GT	3	6	4801933	4801938	0 %	50 %	50 %	0 %	Non-Coding
19012	NC_007384	TGCGC	2	10	4802810	4802819	0 %	20 %	40 %	40 %	Non-Coding
19013	NC_007384	GCC	2	6	4802883	4802888	0 %	0 %	33.33 %	66.67 %	Non-Coding
19014	NC_007384	CTGAT	2	10	4804246	4804255	20 %	40 %	20 %	20 %	Non-Coding
19015	NC_007384	TCA	2	6	4806384	4806389	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19016	NC_007384	TAT	2	6	4806414	4806419	33.33 %	66.67 %	0 %	0 %	Non-Coding
19017	NC_007384	A	6	6	4806433	4806438	100 %	0 %	0 %	0 %	Non-Coding
19018	NC_007384	TGG	2	6	4806518	4806523	0 %	33.33 %	66.67 %	0 %	Non-Coding
19019	NC_007384	TACT	2	8	4806622	4806629	25 %	50 %	0 %	25 %	Non-Coding
19020	NC_007384	CGG	2	6	4806661	4806666	0 %	0 %	66.67 %	33.33 %	Non-Coding
19021	NC_007384	GATC	2	8	4806727	4806734	25 %	25 %	25 %	25 %	Non-Coding
19022	NC_007384	CCTT	2	8	4806741	4806748	0 %	50 %	0 %	50 %	Non-Coding
19023	NC_007384	GTA	2	6	4807801	4807806	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19024	NC_007384	CGCC	2	8	4809536	4809543	0 %	0 %	25 %	75 %	Non-Coding
19025	NC_007384	GCGG	2	8	4809549	4809556	0 %	0 %	75 %	25 %	Non-Coding
19026	NC_007384	GA	3	6	4810963	4810968	50 %	0 %	50 %	0 %	Non-Coding
19027	NC_007384	GGAG	2	8	4810972	4810979	25 %	0 %	75 %	0 %	Non-Coding
19028	NC_007384	T	6	6	4812253	4812258	0 %	100 %	0 %	0 %	Non-Coding
19029	NC_007384	CT	3	6	4812273	4812278	0 %	50 %	0 %	50 %	Non-Coding
19030	NC_007384	A	6	6	4812310	4812315	100 %	0 %	0 %	0 %	Non-Coding
19031	NC_007384	TGT	2	6	4812357	4812362	0 %	66.67 %	33.33 %	0 %	Non-Coding
19032	NC_007384	CGC	2	6	4812498	4812503	0 %	0 %	33.33 %	66.67 %	Non-Coding
19033	NC_007384	TGA	3	9	4814215	4814223	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19034	NC_007384	AGTAAA	2	12	4814286	4814297	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
19035	NC_007384	A	6	6	4814295	4814300	100 %	0 %	0 %	0 %	Non-Coding
19036	NC_007384	GCG	2	6	4816814	4816819	0 %	0 %	66.67 %	33.33 %	Non-Coding
19037	NC_007384	CAG	2	6	4817388	4817393	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19038	NC_007384	A	7	7	4817401	4817407	100 %	0 %	0 %	0 %	Non-Coding
19039	NC_007384	CAA	2	6	4818942	4818947	66.67 %	0 %	0 %	33.33 %	Non-Coding
19040	NC_007384	ATA	2	6	4818973	4818978	66.67 %	33.33 %	0 %	0 %	Non-Coding
19041	NC_007384	T	6	6	4818982	4818987	0 %	100 %	0 %	0 %	Non-Coding
19042	NC_007384	T	7	7	4819007	4819013	0 %	100 %	0 %	0 %	Non-Coding
19043	NC_007384	TAG	2	6	4819016	4819021	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19044	NC_007384	TTC	2	6	4821741	4821746	0 %	66.67 %	0 %	33.33 %	Non-Coding
19045	NC_007384	CTG	2	6	4821765	4821770	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19046	NC_007384	T	8	8	4823178	4823185	0 %	100 %	0 %	0 %	Non-Coding
19047	NC_007384	GGT	2	6	4823189	4823194	0 %	33.33 %	66.67 %	0 %	Non-Coding
19048	NC_007384	CCTG	2	8	4823974	4823981	0 %	25 %	25 %	50 %	Non-Coding
19049	NC_007384	ATGC	2	8	4823982	4823989	25 %	25 %	25 %	25 %	Non-Coding
19050	NC_007384	AT	3	6	4824202	4824207	50 %	50 %	0 %	0 %	Non-Coding
19051	NC_007384	TGA	2	6	4824236	4824241	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19052	NC_007384	ATC	2	6	4824243	4824248	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19053	NC_007384	ATT	2	6	4824274	4824279	33.33 %	66.67 %	0 %	0 %	Non-Coding
19054	NC_007384	TAA	2	6	4824281	4824286	66.67 %	33.33 %	0 %	0 %	Non-Coding
19055	NC_007384	CAT	2	6	4824299	4824304	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19056	NC_007384	TAA	2	6	4824310	4824315	66.67 %	33.33 %	0 %	0 %	Non-Coding
19057	NC_007384	GTG	2	6	4824318	4824323	0 %	33.33 %	66.67 %	0 %	Non-Coding
19058	NC_007384	ATTT	2	8	4824339	4824346	25 %	75 %	0 %	0 %	Non-Coding
19059	NC_007384	T	6	6	4824344	4824349	0 %	100 %	0 %	0 %	Non-Coding
19060	NC_007384	T	6	6	4824387	4824392	0 %	100 %	0 %	0 %	Non-Coding
19061	NC_007384	T	6	6	4824433	4824438	0 %	100 %	0 %	0 %	Non-Coding
19062	NC_007384	TAA	2	6	4824498	4824503	66.67 %	33.33 %	0 %	0 %	Non-Coding
19063	NC_007384	AAG	2	6	4824540	4824545	66.67 %	0 %	33.33 %	0 %	Non-Coding
19064	NC_007384	AGTA	2	8	4825252	4825259	50 %	25 %	25 %	0 %	Non-Coding

< Previous12...27282930313233343536373839Next >

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.