MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 plasmid pSSP1

Total Repeats: 105

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007351	CTA	2	6	370	375	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_007351	TAA	2	6	447	452	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_007351	AGT	2	6	505	510	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_007351	TTC	2	6	568	573	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_007351	TAA	2	6	616	621	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_007351	TTA	2	6	647	652	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_007351	ATT	2	6	656	661	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_007351	TTA	2	6	670	675	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_007351	CAT	2	6	1281	1286	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_007351	TTA	2	6	1312	1317	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_007351	ATA	2	6	1323	1328	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_007351	ATA	2	6	4371	4376	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_007351	TTA	2	6	6545	6550	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_007351	TCT	2	6	8660	8665	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_007351	ATT	2	6	8667	8672	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_007351	TAA	2	6	9047	9052	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_007351	TTA	2	6	9083	9088	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_007351	TAA	2	6	9156	9161	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_007351	TCC	2	6	11077	11082	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_007351	TAT	2	6	11088	11093	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_007351	TTC	2	6	11094	11099	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_007351	ACC	2	6	11677	11682	33.33 %	0 %	0 %	66.67 %	Non-Coding
23	NC_007351	TTA	2	6	11706	11711	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_007351	TTA	3	9	12123	12131	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_007351	CAT	2	6	12508	12513	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_007351	TAA	2	6	12522	12527	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_007351	TAA	2	6	12579	12584	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_007351	TTA	3	9	12616	12624	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_007351	TAA	2	6	12696	12701	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_007351	GAT	2	6	12788	12793	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_007351	TGA	2	6	12912	12917	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_007351	GTT	2	6	12920	12925	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_007351	AGA	2	6	12965	12970	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_007351	CAA	2	6	13101	13106	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_007351	AGC	2	6	13134	13139	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_007351	TAT	2	6	13611	13616	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_007351	TAC	2	6	18973	18978	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_007351	TAA	2	6	19054	19059	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_007351	GAA	2	6	19069	19074	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_007351	AAT	2	6	19140	19145	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_007351	ATT	2	6	19204	19209	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_007351	AGG	2	6	19219	19224	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_007351	ATA	2	6	19431	19436	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_007351	TCT	2	6	19805	19810	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_007351	CAT	2	6	19815	19820	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_007351	GGA	2	6	19874	19879	33.33 %	0 %	66.67 %	0 %	Non-Coding
47	NC_007351	TGT	2	6	20835	20840	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_007351	AAT	2	6	20880	20885	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_007351	TAA	2	6	20903	20908	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_007351	TTG	2	6	20912	20917	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_007351	TTA	2	6	20951	20956	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_007351	GAT	2	6	20965	20970	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_007351	CCT	2	6	22064	22069	0 %	33.33 %	0 %	66.67 %	Non-Coding
54	NC_007351	TGT	2	6	22112	22117	0 %	66.67 %	33.33 %	0 %	Non-Coding
55	NC_007351	GTT	2	6	22176	22181	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NC_007351	TGT	2	6	22208	22213	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_007351	TGT	2	6	22304	22309	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_007351	GTT	2	6	22367	22372	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_007351	TGT	2	6	22399	22404	0 %	66.67 %	33.33 %	0 %	Non-Coding
60	NC_007351	TGT	2	6	22495	22500	0 %	66.67 %	33.33 %	0 %	Non-Coding
61	NC_007351	TGT	2	6	22590	22595	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_007351	GTT	2	6	22653	22658	0 %	66.67 %	33.33 %	0 %	Non-Coding
63	NC_007351	TGT	2	6	22685	22690	0 %	66.67 %	33.33 %	0 %	Non-Coding
64	NC_007351	TTA	3	9	22757	22765	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_007351	GTA	2	6	22797	22802	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_007351	TAA	2	6	22822	22827	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_007351	TAT	2	6	22868	22873	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_007351	TTA	2	6	22907	22912	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_007351	TTA	2	6	22940	22945	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_007351	AAT	2	6	25192	25197	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_007351	AAT	2	6	25353	25358	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_007351	ACT	2	6	25461	25466	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_007351	TTA	2	6	25516	25521	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_007351	GAT	2	6	25574	25579	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_007351	GTC	2	6	25709	25714	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_007351	TCA	2	6	25722	25727	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_007351	TAA	2	6	25760	25765	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_007351	AAT	2	6	25770	25775	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_007351	TCT	2	6	25883	25888	0 %	66.67 %	0 %	33.33 %	Non-Coding
80	NC_007351	ATA	2	6	26737	26742	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_007351	TTA	2	6	26743	26748	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_007351	CCT	2	6	27315	27320	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_007351	ATT	2	6	27334	27339	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_007351	ATA	2	6	27423	27428	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_007351	GGA	2	6	27435	27440	33.33 %	0 %	66.67 %	0 %	Non-Coding
86	NC_007351	ATT	2	6	27602	27607	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_007351	TTA	2	6	31391	31396	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_007351	ACA	2	6	31528	31533	66.67 %	0 %	0 %	33.33 %	Non-Coding
89	NC_007351	TAA	2	6	33092	33097	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_007351	TCT	2	6	33221	33226	0 %	66.67 %	0 %	33.33 %	Non-Coding
91	NC_007351	AGG	2	6	35115	35120	33.33 %	0 %	66.67 %	0 %	Non-Coding
92	NC_007351	TTC	2	6	35943	35948	0 %	66.67 %	0 %	33.33 %	Non-Coding
93	NC_007351	TTA	2	6	36004	36009	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_007351	TAA	2	6	36483	36488	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_007351	ATT	2	6	36600	36605	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_007351	TTA	2	6	36645	36650	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_007351	TCG	2	6	36760	36765	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
98	NC_007351	TCG	2	6	36841	36846	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
99	NC_007351	CTA	2	6	36924	36929	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
100	NC_007351	CGA	2	6	36984	36989	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
101	NC_007351	GAA	2	6	37102	37107	66.67 %	0 %	33.33 %	0 %	Non-Coding
102	NC_007351	TAA	2	6	37340	37345	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_007351	CGT	2	6	37381	37386	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
104	NC_007351	TCT	2	6	37655	37660	0 %	66.67 %	0 %	33.33 %	Non-Coding
105	NC_007351	TAC	2	6	38410	38415	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.