MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS

Total Repeats: 123

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005951	ATG	2	6	747	752	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_005951	TAA	2	6	804	809	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_005951	TAT	2	6	872	877	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_005951	ATT	2	6	888	893	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_005951	GTT	2	6	897	902	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_005951	TAA	2	6	1040	1045	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_005951	TGA	2	6	1052	1057	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_005951	GAA	2	6	1164	1169	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NC_005951	GAA	3	9	1209	1217	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_005951	AAG	2	6	1324	1329	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_005951	TAA	2	6	1337	1342	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_005951	TAA	2	6	1385	1390	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_005951	ATT	2	6	1519	1524	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_005951	AGC	2	6	1712	1717	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_005951	GAT	2	6	1721	1726	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_005951	GAT	2	6	1731	1736	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_005951	GAA	2	6	1842	1847	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_005951	ATT	2	6	1873	1878	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_005951	TGT	2	6	1879	1884	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_005951	ATG	2	6	1962	1967	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_005951	AGA	2	6	1970	1975	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_005951	TAA	2	6	1990	1995	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_005951	ATG	2	6	2056	2061	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_005951	AAG	2	6	2073	2078	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_005951	AGA	2	6	2114	2119	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_005951	AGA	2	6	2123	2128	66.67 %	0 %	33.33 %	0 %	Non-Coding
27	NC_005951	TAA	2	6	2508	2513	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_005951	ATT	2	6	3437	3442	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_005951	ATG	2	6	4100	4105	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_005951	CCT	2	6	4134	4139	0 %	33.33 %	0 %	66.67 %	Non-Coding
31	NC_005951	GAC	2	6	4169	4174	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_005951	TAA	2	6	4221	4226	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_005951	TGT	2	6	4228	4233	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_005951	GAT	2	6	4603	4608	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_005951	ATC	2	6	5422	5427	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_005951	TAA	3	9	5484	5492	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_005951	TAA	2	6	5618	5623	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_005951	ACT	2	6	5646	5651	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_005951	TAA	2	6	5671	5676	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_005951	AAT	2	6	5730	5735	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_005951	ATT	2	6	5756	5761	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_005951	TTA	2	6	5788	5793	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_005951	TAT	2	6	5828	5833	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_005951	ACA	2	6	5848	5853	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_005951	ATG	2	6	5932	5937	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NC_005951	TTA	2	6	6026	6031	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_005951	TAC	3	9	6116	6124	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_005951	AGA	2	6	6183	6188	66.67 %	0 %	33.33 %	0 %	Non-Coding
49	NC_005951	AGC	2	6	6229	6234	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_005951	AAG	2	6	6265	6270	66.67 %	0 %	33.33 %	0 %	Non-Coding
51	NC_005951	GAA	2	6	6434	6439	66.67 %	0 %	33.33 %	0 %	Non-Coding
52	NC_005951	ATC	2	6	6548	6553	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53	NC_005951	TGG	2	6	6640	6645	0 %	33.33 %	66.67 %	0 %	Non-Coding
54	NC_005951	TGA	2	6	6715	6720	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_005951	GAA	3	9	6737	6745	66.67 %	0 %	33.33 %	0 %	Non-Coding
56	NC_005951	ATT	3	9	6782	6790	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_005951	AGA	2	6	7067	7072	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_005951	TCG	2	6	7353	7358	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NC_005951	GTA	2	6	7411	7416	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_005951	CGA	2	6	7495	7500	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_005951	GAC	2	6	7575	7580	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_005951	TAA	2	6	7692	7697	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_005951	GAA	2	6	7818	7823	66.67 %	0 %	33.33 %	0 %	Non-Coding
64	NC_005951	ATT	2	6	7953	7958	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_005951	TCT	2	6	9011	9016	0 %	66.67 %	0 %	33.33 %	Non-Coding
66	NC_005951	GAC	2	6	9055	9060	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
67	NC_005951	GAT	2	6	9094	9099	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_005951	ATA	2	6	9100	9105	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_005951	CAT	2	6	9182	9187	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_005951	TCA	2	6	9196	9201	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_005951	TAT	2	6	9219	9224	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_005951	CAA	2	6	9245	9250	66.67 %	0 %	0 %	33.33 %	Non-Coding
73	NC_005951	AGT	2	6	9305	9310	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_005951	TAG	2	6	9368	9373	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_005951	ATA	2	6	9388	9393	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_005951	AGT	2	6	9399	9404	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_005951	TTG	2	6	10471	10476	0 %	66.67 %	33.33 %	0 %	Non-Coding
78	NC_005951	TAA	2	6	10510	10515	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_005951	TCT	2	6	11497	11502	0 %	66.67 %	0 %	33.33 %	Non-Coding
80	NC_005951	CAA	2	6	11737	11742	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_005951	TAA	2	6	11743	11748	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_005951	GTT	2	6	11754	11759	0 %	66.67 %	33.33 %	0 %	Non-Coding
83	NC_005951	TTC	2	6	11878	11883	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_005951	TTA	2	6	11898	11903	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_005951	ATT	2	6	11920	11925	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_005951	GTT	2	6	11943	11948	0 %	66.67 %	33.33 %	0 %	Non-Coding
87	NC_005951	ATG	2	6	12064	12069	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_005951	ATA	3	9	12243	12251	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_005951	TGA	2	6	12396	12401	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
90	NC_005951	TAA	2	6	12433	12438	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_005951	ATT	2	6	12473	12478	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_005951	TCA	2	6	12558	12563	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_005951	CCT	2	6	13385	13390	0 %	33.33 %	0 %	66.67 %	Non-Coding
94	NC_005951	AGA	2	6	13504	13509	66.67 %	0 %	33.33 %	0 %	Non-Coding
95	NC_005951	TAA	2	6	13549	13554	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_005951	TAA	2	6	13586	13591	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_005951	TAT	2	6	13615	13620	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_005951	CTT	2	6	15776	15781	0 %	66.67 %	0 %	33.33 %	Non-Coding
99	NC_005951	TAA	2	6	15793	15798	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_005951	ATT	2	6	15828	15833	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_005951	ATA	2	6	16732	16737	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_005951	TAT	2	6	16763	16768	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_005951	TAT	2	6	16775	16780	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_005951	TAT	2	6	16824	16829	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_005951	TCA	2	6	16926	16931	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
106	NC_005951	AAT	2	6	16991	16996	66.67 %	33.33 %	0 %	0 %	Non-Coding
107	NC_005951	TTG	2	6	17024	17029	0 %	66.67 %	33.33 %	0 %	Non-Coding
108	NC_005951	TTG	2	6	17092	17097	0 %	66.67 %	33.33 %	0 %	Non-Coding
109	NC_005951	ATC	2	6	17111	17116	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
110	NC_005951	AAG	2	6	17227	17232	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_005951	GTA	2	6	17265	17270	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
112	NC_005951	ATG	2	6	17299	17304	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
113	NC_005951	ATT	2	6	17349	17354	33.33 %	66.67 %	0 %	0 %	Non-Coding
114	NC_005951	TAT	2	6	17498	17503	33.33 %	66.67 %	0 %	0 %	Non-Coding
115	NC_005951	ATC	2	6	17506	17511	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
116	NC_005951	AGA	2	6	17528	17533	66.67 %	0 %	33.33 %	0 %	Non-Coding
117	NC_005951	AAG	2	6	17560	17565	66.67 %	0 %	33.33 %	0 %	Non-Coding
118	NC_005951	TAA	2	6	17619	17624	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_005951	GAT	2	6	17671	17676	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
120	NC_005951	TAT	2	6	17684	17689	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_005951	TAA	3	9	17697	17705	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_005951	ATG	2	6	17771	17776	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
123	NC_005951	ATT	2	6	17795	17800	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.