MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-04

Total Repeats: 52

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005005	TTA	2	6	1134	1139	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_005005	CCT	2	6	3105	3110	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_005005	TTG	2	6	3160	3165	0 %	66.67 %	33.33 %	0 %	Non-Coding
4	NC_005005	TAG	2	6	3879	3884	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_005005	AAT	3	9	3893	3901	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_005005	TTG	2	6	4031	4036	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_005005	TTA	2	6	4039	4044	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_005005	TAA	2	6	5021	5026	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_005005	GAT	2	6	5068	5073	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_005005	TTA	2	6	5131	5136	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_005005	ATG	2	6	5361	5366	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_005005	GGT	2	6	5382	5387	0 %	33.33 %	66.67 %	0 %	Non-Coding
13	NC_005005	TTG	2	6	6221	6226	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_005005	ATC	2	6	6258	6263	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_005005	ATC	2	6	6504	6509	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_005005	TCA	2	6	6574	6579	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_005005	TTC	2	6	6648	6653	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_005005	ATT	2	6	6678	6683	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_005005	AGA	2	6	6749	6754	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_005005	TAA	3	9	8062	8070	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_005005	TTA	2	6	8971	8976	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_005005	AAT	2	6	9028	9033	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_005005	CAA	2	6	9764	9769	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_005005	CCT	2	6	10390	10395	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_005005	AAC	2	6	10585	10590	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_005005	TTA	2	6	10633	10638	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_005005	ATG	2	6	10662	10667	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_005005	ATT	2	6	10686	10691	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_005005	TAT	2	6	10752	10757	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_005005	AAC	2	6	10829	10834	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_005005	AGA	2	6	13404	13409	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_005005	TAA	2	6	13414	13419	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_005005	ATT	2	6	13626	13631	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_005005	TAT	2	6	13712	13717	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_005005	ATA	2	6	13740	13745	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_005005	ATG	2	6	15628	15633	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_005005	AAC	2	6	15642	15647	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_005005	ATA	2	6	15655	15660	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_005005	GTT	2	6	15672	15677	0 %	66.67 %	33.33 %	0 %	Non-Coding
40	NC_005005	TTG	2	6	15753	15758	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_005005	TAA	2	6	15766	15771	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_005005	TTA	2	6	16000	16005	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_005005	CTA	2	6	16151	16156	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_005005	AGT	2	6	16223	16228	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_005005	ATT	2	6	16270	16275	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_005005	AAC	2	6	16302	16307	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_005005	CTA	2	6	16321	16326	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_005005	CCT	2	6	16374	16379	0 %	33.33 %	0 %	66.67 %	Non-Coding
49	NC_005005	ACG	2	6	16408	16413	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_005005	ATA	2	6	16501	16506	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_005005	TAC	2	6	16550	16555	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_005005	AAG	2	6	17179	17184	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.