MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-05

Total Repeats: 101

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005004	AGA	2	6	10	15	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_005004	AAT	2	6	72	77	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_005004	AAT	2	6	81	86	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_005004	AAC	2	6	92	97	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_005004	ATC	2	6	118	123	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_005004	GAA	2	6	499	504	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_005004	CAA	2	6	2292	2297	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_005004	AGG	2	6	2385	2390	33.33 %	0 %	66.67 %	0 %	Non-Coding
9	NC_005004	TAT	2	6	2411	2416	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_005004	CAA	2	6	2422	2427	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_005004	AAG	2	6	2441	2446	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_005004	TAG	2	6	2490	2495	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_005004	TAT	2	6	4332	4337	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_005004	AGT	2	6	4347	4352	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_005004	ATT	2	6	4377	4382	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_005004	TTA	2	6	5288	5293	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_005004	ATT	2	6	5306	5311	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_005004	ATA	3	9	5337	5345	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_005004	TAG	2	6	5373	5378	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_005004	GAA	2	6	5480	5485	66.67 %	0 %	33.33 %	0 %	Non-Coding
21	NC_005004	GAA	2	6	5528	5533	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_005004	AAG	2	6	5564	5569	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_005004	AAT	2	6	5573	5578	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_005004	TGA	2	6	5593	5598	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_005004	CAA	2	6	5623	5628	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_005004	TAA	2	6	5686	5691	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_005004	ATA	2	6	5726	5731	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_005004	TCA	2	6	5887	5892	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_005004	AAT	2	6	5920	5925	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_005004	ACC	2	6	5937	5942	33.33 %	0 %	0 %	66.67 %	Non-Coding
31	NC_005004	GGT	2	6	5953	5958	0 %	33.33 %	66.67 %	0 %	Non-Coding
32	NC_005004	ACT	2	6	6026	6031	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_005004	TCT	2	6	6083	6088	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_005004	TTC	2	6	6109	6114	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_005004	ATT	2	6	6272	6277	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_005004	CAA	2	6	6303	6308	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_005004	ATG	2	6	6312	6317	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_005004	TAT	2	6	6379	6384	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_005004	CTT	2	6	6399	6404	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_005004	ATA	2	6	6424	6429	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_005004	ATA	2	6	6431	6436	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_005004	ATT	2	6	6996	7001	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_005004	TGA	2	6	7061	7066	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_005004	TAT	2	6	7091	7096	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_005004	ATA	2	6	7163	7168	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_005004	CAA	2	6	7207	7212	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_005004	GAT	2	6	7228	7233	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_005004	CAT	2	6	7395	7400	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_005004	TAT	2	6	7491	7496	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_005004	AGC	2	6	7579	7584	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_005004	TGT	2	6	7682	7687	0 %	66.67 %	33.33 %	0 %	Non-Coding
52	NC_005004	TAT	2	6	7737	7742	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_005004	ATC	2	6	7831	7836	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
54	NC_005004	TTA	2	6	7865	7870	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_005004	AAT	2	6	8147	8152	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_005004	TAT	2	6	8183	8188	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_005004	AAG	2	6	8199	8204	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_005004	ATA	2	6	10360	10365	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_005004	TTA	2	6	10389	10394	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_005004	TAA	2	6	10407	10412	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_005004	CAA	2	6	10526	10531	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_005004	CAA	2	6	14803	14808	66.67 %	0 %	0 %	33.33 %	Non-Coding
63	NC_005004	TGA	2	6	14818	14823	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_005004	CCT	2	6	14866	14871	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_005004	ATA	2	6	14938	14943	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_005004	AGA	2	6	16295	16300	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_005004	ATG	2	6	16305	16310	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_005004	ATC	2	6	16391	16396	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_005004	TAT	2	6	16420	16425	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_005004	TAC	2	6	16466	16471	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_005004	ACT	2	6	16485	16490	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
72	NC_005004	TGA	2	6	16656	16661	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_005004	ATG	2	6	16690	16695	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_005004	ATG	2	6	16790	16795	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_005004	ATC	2	6	16848	16853	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_005004	GAT	2	6	17670	17675	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_005004	AGG	2	6	19337	19342	33.33 %	0 %	66.67 %	0 %	Non-Coding
78	NC_005004	ATT	2	6	19387	19392	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_005004	ATC	2	6	19404	19409	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_005004	ATT	2	6	19413	19418	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_005004	CAA	2	6	19423	19428	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_005004	CTT	2	6	20001	20006	0 %	66.67 %	0 %	33.33 %	Non-Coding
83	NC_005004	TAA	2	6	20912	20917	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_005004	TCG	2	6	21536	21541	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_005004	TTC	2	6	21560	21565	0 %	66.67 %	0 %	33.33 %	Non-Coding
86	NC_005004	ACT	2	6	21600	21605	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_005004	AAC	2	6	21637	21642	66.67 %	0 %	0 %	33.33 %	Non-Coding
88	NC_005004	GTC	2	6	21785	21790	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
89	NC_005004	AAC	2	6	21825	21830	66.67 %	0 %	0 %	33.33 %	Non-Coding
90	NC_005004	CTA	2	6	21844	21849	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_005004	TAT	2	6	21860	21865	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_005004	CCT	2	6	21894	21899	0 %	33.33 %	0 %	66.67 %	Non-Coding
93	NC_005004	GAC	2	6	21927	21932	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_005004	GTC	2	6	22066	22071	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_005004	TTA	2	6	22272	22277	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_005004	TCA	2	6	23207	23212	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_005004	TAA	2	6	23263	23268	66.67 %	33.33 %	0 %	0 %	Non-Coding
98	NC_005004	ACT	2	6	23316	23321	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_005004	TAA	2	6	23343	23348	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_005004	TAT	2	6	23389	23394	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_005004	TTA	2	6	23462	23467	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.