MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Sinorhizobium meliloti 1021 plasmid pSymB

Total Repeats: 41

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003078	GTTTCG	2	12	29520	29531	0 %	50 %	33.33 %	16.67 %	Non-Coding
2	NC_003078	TGCCGC	2	12	96409	96420	0 %	16.67 %	33.33 %	50 %	Non-Coding
3	NC_003078	AGGGTG	2	12	130483	130494	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
4	NC_003078	ATAAGC	2	12	172221	172232	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
5	NC_003078	CGATCT	2	12	178670	178681	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
6	NC_003078	TGGCAC	2	12	221909	221920	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
7	NC_003078	TCGCCT	2	12	225161	225172	0 %	33.33 %	16.67 %	50 %	Non-Coding
8	NC_003078	GGAGCG	2	12	357422	357433	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
9	NC_003078	CCTTTC	2	12	534569	534580	0 %	50 %	0 %	50 %	Non-Coding
10	NC_003078	TTCCGC	2	12	544902	544913	0 %	33.33 %	16.67 %	50 %	Non-Coding
11	NC_003078	GGCTCT	2	12	575790	575801	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_003078	TCACCT	2	12	585448	585459	16.67 %	33.33 %	0 %	50 %	Non-Coding
13	NC_003078	TTTGGC	2	12	595584	595595	0 %	50 %	33.33 %	16.67 %	Non-Coding
14	NC_003078	TTGAAC	2	12	601781	601792	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
15	NC_003078	CAGTTC	2	12	612971	612982	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
16	NC_003078	CCCGCG	2	12	648167	648178	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_003078	CGCCTG	2	12	667775	667786	0 %	16.67 %	33.33 %	50 %	Non-Coding
18	NC_003078	CGAAGC	2	12	671365	671376	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_003078	ATGCGA	2	12	717246	717257	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
20	NC_003078	AATGAA	2	12	892501	892512	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
21	NC_003078	GAGGGG	2	12	893775	893786	16.67 %	0 %	83.33 %	0 %	Non-Coding
22	NC_003078	GAAGGC	2	12	1044168	1044179	33.33 %	0 %	50 %	16.67 %	Non-Coding
23	NC_003078	TCGTGT	2	12	1141768	1141779	0 %	50 %	33.33 %	16.67 %	Non-Coding
24	NC_003078	ACGGCA	2	12	1228636	1228647	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_003078	ACAGGC	2	12	1230202	1230213	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_003078	TCAGTT	2	12	1268163	1268174	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
27	NC_003078	CCGGCG	2	12	1279673	1279684	0 %	0 %	50 %	50 %	Non-Coding
28	NC_003078	TTAGCG	2	12	1311411	1311422	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
29	NC_003078	GATTCC	2	12	1315212	1315223	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
30	NC_003078	AGGCCC	2	12	1332567	1332578	16.67 %	0 %	33.33 %	50 %	Non-Coding
31	NC_003078	CGAGAC	2	12	1334293	1334304	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_003078	GCGGCT	2	12	1370809	1370820	0 %	16.67 %	50 %	33.33 %	Non-Coding
33	NC_003078	CTTCCG	2	12	1381790	1381801	0 %	33.33 %	16.67 %	50 %	Non-Coding
34	NC_003078	GGATTT	2	12	1404233	1404244	16.67 %	50 %	33.33 %	0 %	Non-Coding
35	NC_003078	TGCGGA	2	12	1448633	1448644	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
36	NC_003078	ACCGGC	2	12	1450492	1450503	16.67 %	0 %	33.33 %	50 %	Non-Coding
37	NC_003078	CCCAAA	2	12	1493819	1493830	50 %	0 %	0 %	50 %	Non-Coding
38	NC_003078	GCGCCG	2	12	1507019	1507030	0 %	0 %	50 %	50 %	Non-Coding
39	NC_003078	GTGCAA	2	12	1536493	1536504	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
40	NC_003078	ACAGGC	2	12	1543568	1543579	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_003078	TTCAGC	2	12	1665072	1665083	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.