MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Sinorhizobium meliloti 1021 plasmid pSymA

Total Repeats: 70

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003037	GACGAA	2	12	13214	13225	50 %	0 %	33.33 %	16.67 %	Non-Coding
2	NC_003037	GAGGGG	2	12	54543	54554	16.67 %	0 %	83.33 %	0 %	Non-Coding
3	NC_003037	CCTTTT	2	12	65344	65355	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_003037	CGGGTG	2	12	77005	77016	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
5	NC_003037	CATTTT	2	12	125133	125144	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
6	NC_003037	CACCCG	2	12	174175	174186	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
7	NC_003037	ATTGTC	2	12	175166	175177	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
8	NC_003037	GAGGAA	2	12	186512	186523	50 %	0 %	50 %	0 %	Non-Coding
9	NC_003037	GTGCAA	2	12	206919	206930	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
10	NC_003037	TGCCAT	2	12	210151	210162	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
11	NC_003037	GTGCAT	2	12	258187	258198	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
12	NC_003037	CCGCAG	2	12	263308	263319	16.67 %	0 %	33.33 %	50 %	Non-Coding
13	NC_003037	ACGGAA	2	12	288834	288845	50 %	0 %	33.33 %	16.67 %	Non-Coding
14	NC_003037	TGCGCG	2	12	341060	341071	0 %	16.67 %	50 %	33.33 %	Non-Coding
15	NC_003037	TCGGCA	2	12	343368	343379	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
16	NC_003037	CGTGTC	2	12	348144	348155	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_003037	AGCGCG	2	12	372435	372446	16.67 %	0 %	50 %	33.33 %	Non-Coding
18	NC_003037	CAGTCG	3	18	452767	452784	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
19	NC_003037	CCACTC	2	12	462509	462520	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
20	NC_003037	CGAGGA	2	12	464226	464237	33.33 %	0 %	50 %	16.67 %	Non-Coding
21	NC_003037	TTGCAT	2	12	472381	472392	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
22	NC_003037	CGGCGC	2	12	472582	472593	0 %	0 %	50 %	50 %	Non-Coding
23	NC_003037	TCTCCA	2	12	510415	510426	16.67 %	33.33 %	0 %	50 %	Non-Coding
24	NC_003037	CGAGAT	2	12	579832	579843	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
25	NC_003037	CTCGCA	2	12	584389	584400	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
26	NC_003037	CGATTA	2	12	608141	608152	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
27	NC_003037	TAGCTG	2	12	623618	623629	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
28	NC_003037	TCAGCG	2	12	654648	654659	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
29	NC_003037	TTGCGC	2	12	658362	658373	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_003037	CGCTGA	2	12	682320	682331	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
31	NC_003037	GCCGCA	2	12	698709	698720	16.67 %	0 %	33.33 %	50 %	Non-Coding
32	NC_003037	CGCGAG	2	12	763949	763960	16.67 %	0 %	50 %	33.33 %	Non-Coding
33	NC_003037	CCCTGC	2	12	764163	764174	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
34	NC_003037	GCCGCA	2	12	798791	798802	16.67 %	0 %	33.33 %	50 %	Non-Coding
35	NC_003037	GCTCCA	2	12	801180	801191	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
36	NC_003037	CCTTGG	2	12	824345	824356	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_003037	CCGGAT	2	12	838673	838684	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
38	NC_003037	TTGGCC	2	12	845711	845722	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_003037	CGCGGC	2	12	909262	909273	0 %	0 %	50 %	50 %	Non-Coding
40	NC_003037	GACAGC	2	12	933082	933093	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_003037	TCACCA	2	12	952497	952508	33.33 %	16.67 %	0 %	50 %	Non-Coding
42	NC_003037	GCGCGA	2	12	958603	958614	16.67 %	0 %	50 %	33.33 %	Non-Coding
43	NC_003037	CTCGGC	2	12	971717	971728	0 %	16.67 %	33.33 %	50 %	Non-Coding
44	NC_003037	CCGCTG	2	12	976757	976768	0 %	16.67 %	33.33 %	50 %	Non-Coding
45	NC_003037	TCGGCG	2	12	1006158	1006169	0 %	16.67 %	50 %	33.33 %	Non-Coding
46	NC_003037	CGTGAC	2	12	1008643	1008654	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
47	NC_003037	CGAAAC	2	12	1035441	1035452	50 %	0 %	16.67 %	33.33 %	Non-Coding
48	NC_003037	TCCTTG	2	12	1049276	1049287	0 %	50 %	16.67 %	33.33 %	Non-Coding
49	NC_003037	ATCTAA	2	12	1074205	1074216	50 %	33.33 %	0 %	16.67 %	Non-Coding
50	NC_003037	GCACTG	2	12	1082522	1082533	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
51	NC_003037	GTTTCT	2	12	1092183	1092194	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
52	NC_003037	CGTCCG	2	12	1099542	1099553	0 %	16.67 %	33.33 %	50 %	Non-Coding
53	NC_003037	GCGACG	2	12	1101530	1101541	16.67 %	0 %	50 %	33.33 %	Non-Coding
54	NC_003037	ATGCCC	2	12	1103461	1103472	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
55	NC_003037	TCGTTT	2	12	1107030	1107041	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
56	NC_003037	GGCGCG	2	12	1142940	1142951	0 %	0 %	66.67 %	33.33 %	Non-Coding
57	NC_003037	GACGAA	2	12	1156600	1156611	50 %	0 %	33.33 %	16.67 %	Non-Coding
58	NC_003037	GCCGCG	2	12	1216316	1216327	0 %	0 %	50 %	50 %	Non-Coding
59	NC_003037	AGCTGA	2	12	1216584	1216595	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
60	NC_003037	GCAAGA	2	12	1247955	1247966	50 %	0 %	33.33 %	16.67 %	Non-Coding
61	NC_003037	CACCGT	2	12	1262450	1262461	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
62	NC_003037	TCACTG	2	12	1269691	1269702	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
63	NC_003037	CGGTCC	2	12	1286130	1286141	0 %	16.67 %	33.33 %	50 %	Non-Coding
64	NC_003037	CGGCAA	2	12	1295569	1295580	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_003037	GCGACG	2	12	1304302	1304313	16.67 %	0 %	50 %	33.33 %	Non-Coding
66	NC_003037	GGCAGT	2	12	1304807	1304818	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
67	NC_003037	GGCATC	2	12	1319249	1319260	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
68	NC_003037	TCACTC	2	12	1322709	1322720	16.67 %	33.33 %	0 %	50 %	Non-Coding
69	NC_003037	GACGAA	2	12	1340334	1340345	50 %	0 %	33.33 %	16.67 %	Non-Coding
70	NC_003037	CGTCAG	2	12	1344783	1344794	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.