MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp

Total Repeats: 73

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002774	TAA	2	6	166	171	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_002774	TAT	2	6	214	219	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_002774	ATC	2	6	229	234	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_002774	TTA	2	6	276	281	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_002774	TAA	2	6	1258	1263	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_002774	CAA	2	6	1266	1271	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_002774	ATT	3	9	1401	1409	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_002774	TAC	2	6	1416	1421	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_002774	CTT	2	6	1478	1483	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_002774	TTC	2	6	1538	1543	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_002774	TCA	2	6	1548	1553	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_002774	TAA	3	9	4164	4172	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_002774	TAT	2	6	4249	4254	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_002774	AAT	2	6	4399	4404	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_002774	ATG	2	6	4877	4882	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_002774	TAA	2	6	5163	5168	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_002774	CTA	2	6	5170	5175	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_002774	GGT	2	6	6012	6017	0 %	33.33 %	66.67 %	0 %	Non-Coding
19	NC_002774	GTC	2	6	6846	6851	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_002774	AGG	2	6	6881	6886	33.33 %	0 %	66.67 %	0 %	Non-Coding
21	NC_002774	CGA	2	6	6995	7000	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
22	NC_002774	TAA	2	6	7006	7011	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_002774	ACT	2	6	7031	7036	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_002774	CAT	2	6	7098	7103	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_002774	GGA	2	6	7109	7114	33.33 %	0 %	66.67 %	0 %	Non-Coding
26	NC_002774	AAT	2	6	7126	7131	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_002774	ATC	2	6	8086	8091	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_002774	ATG	2	6	8126	8131	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_002774	TAT	2	6	8132	8137	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_002774	GTT	2	6	8160	8165	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_002774	AGA	2	6	8233	8238	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_002774	ACA	2	6	8261	8266	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_002774	TGT	2	6	8269	8274	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_002774	AAG	2	6	8451	8456	66.67 %	0 %	33.33 %	0 %	Non-Coding
35	NC_002774	AAG	2	6	8743	8748	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_002774	GTT	2	6	8799	8804	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NC_002774	AGA	2	6	9485	9490	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_002774	ATA	2	6	10290	10295	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_002774	TAA	2	6	11128	11133	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_002774	CCT	2	6	11153	11158	0 %	33.33 %	0 %	66.67 %	Non-Coding
41	NC_002774	GTT	2	6	11190	11195	0 %	66.67 %	33.33 %	0 %	Non-Coding
42	NC_002774	GTA	2	6	11299	11304	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_002774	TAT	2	6	12046	12051	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_002774	TAA	2	6	12153	12158	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_002774	ATT	2	6	12693	12698	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_002774	TAT	2	6	14665	14670	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_002774	TGT	2	6	14678	14683	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_002774	AGA	2	6	15458	15463	66.67 %	0 %	33.33 %	0 %	Non-Coding
49	NC_002774	AAT	2	6	15578	15583	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_002774	AAT	2	6	15768	15773	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_002774	TGA	2	6	15782	15787	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_002774	CCT	2	6	15831	15836	0 %	33.33 %	0 %	66.67 %	Non-Coding
53	NC_002774	GAC	2	6	15867	15872	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_002774	GAT	2	6	15901	15906	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_002774	GTA	2	6	15953	15958	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_002774	TAT	2	6	17154	17159	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_002774	GTT	2	6	19539	19544	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_002774	AGA	2	6	20225	20230	66.67 %	0 %	33.33 %	0 %	Non-Coding
59	NC_002774	ACC	2	6	20605	20610	33.33 %	0 %	0 %	66.67 %	Non-Coding
60	NC_002774	ATA	2	6	20813	20818	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_002774	AAT	2	6	21469	21474	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_002774	ATT	2	6	23237	23242	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_002774	TAA	2	6	23274	23279	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_002774	TAA	2	6	23297	23302	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_002774	TTA	2	6	23304	23309	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_002774	TAA	2	6	23314	23319	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_002774	GAT	2	6	23330	23335	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_002774	GAT	2	6	24044	24049	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_002774	TTC	2	6	24105	24110	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_002774	TGA	2	6	24145	24150	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_002774	CAA	2	6	24183	24188	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_002774	ACC	2	6	25022	25027	33.33 %	0 %	0 %	66.67 %	Non-Coding
73	NC_002774	CAT	2	6	25043	25048	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.