MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Coding Repeats of Shigella sonnei Ss046 plasmid pSS046_spB

Total Repeats: 16

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009346	GCAG	2	8	195	202	25 %	0 %	50 %	25 %	145294032
2	NC_009346	GCAG	2	8	366	373	25 %	0 %	50 %	25 %	145294032
3	NC_009346	TGAA	2	8	1154	1161	50 %	25 %	25 %	0 %	145294032
4	NC_009346	AGTT	2	8	1422	1429	25 %	50 %	25 %	0 %	145294032
5	NC_009346	TGCT	2	8	1454	1461	0 %	50 %	25 %	25 %	145294032
6	NC_009346	CAAA	2	8	1620	1627	75 %	0 %	0 %	25 %	145294033
7	NC_009346	TCTT	2	8	1702	1709	0 %	75 %	0 %	25 %	145294033
8	NC_009346	CAAA	2	8	1868	1875	75 %	0 %	0 %	25 %	145294033
9	NC_009346	AGGG	2	8	2031	2038	25 %	0 %	75 %	0 %	145294034
10	NC_009346	ACTG	2	8	3570	3577	25 %	25 %	25 %	25 %	145294037
11	NC_009346	CAGC	2	8	4004	4011	25 %	0 %	25 %	50 %	145294038
12	NC_009346	GAGT	2	8	4080	4087	25 %	25 %	50 %	0 %	145294038
13	NC_009346	GTTT	2	8	4355	4362	0 %	75 %	25 %	0 %	145294038
14	NC_009346	GCCT	2	8	4509	4516	0 %	25 %	25 %	50 %	145294039
15	NC_009346	TCTG	2	8	4650	4657	0 %	50 %	25 %	25 %	145294039
16	NC_009346	CTGG	2	8	4772	4779	0 %	25 %	50 %	25 %	145294039

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.