MICAS: Microsatellite Analysis Server 3.0

All Coding Repeats of Shewanella oneidensis MR-1 chromosome

Total Repeats: 72058

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
72001	NC_004347	TCA	2	6	4966779	4966784	33.33 %	33.33 %	0 %	33.33 %	24376228
72002	NC_004347	TCT	2	6	4966794	4966799	0 %	66.67 %	0 %	33.33 %	24376228
72003	NC_004347	AAT	2	6	4966803	4966808	66.67 %	33.33 %	0 %	0 %	24376228
72004	NC_004347	TGG	2	6	4966855	4966860	0 %	33.33 %	66.67 %	0 %	24376228
72005	NC_004347	GATCGA	2	12	4966873	4966884	33.33 %	16.67 %	33.33 %	16.67 %	24376228
72006	NC_004347	CGC	2	6	4966907	4966912	0 %	0 %	33.33 %	66.67 %	24376228
72007	NC_004347	AAG	2	6	4966915	4966920	66.67 %	0 %	33.33 %	0 %	24376228
72008	NC_004347	AC	3	6	4966932	4966937	50 %	0 %	0 %	50 %	24376228
72009	NC_004347	GTT	3	9	4966938	4966946	0 %	66.67 %	33.33 %	0 %	24376228
72010	NC_004347	ATT	2	6	4967079	4967084	33.33 %	66.67 %	0 %	0 %	24376229
72011	NC_004347	ATG	2	6	4967228	4967233	33.33 %	33.33 %	33.33 %	0 %	24376229
72012	NC_004347	CT	3	6	4967322	4967327	0 %	50 %	0 %	50 %	24376229
72013	NC_004347	AGT	2	6	4967403	4967408	33.33 %	33.33 %	33.33 %	0 %	24376229
72014	NC_004347	ATA	2	6	4967523	4967528	66.67 %	33.33 %	0 %	0 %	24376229
72015	NC_004347	TTG	2	6	4967589	4967594	0 %	66.67 %	33.33 %	0 %	24376229
72016	NC_004347	CAA	2	6	4967602	4967607	66.67 %	0 %	0 %	33.33 %	24376229
72017	NC_004347	GTT	2	6	4967617	4967622	0 %	66.67 %	33.33 %	0 %	24376229
72018	NC_004347	T	6	6	4967621	4967626	0 %	100 %	0 %	0 %	24376229
72019	NC_004347	AAC	2	6	4967692	4967697	66.67 %	0 %	0 %	33.33 %	24376229
72020	NC_004347	TAA	2	6	4967822	4967827	66.67 %	33.33 %	0 %	0 %	24376230
72021	NC_004347	T	6	6	4967834	4967839	0 %	100 %	0 %	0 %	24376230
72022	NC_004347	TGC	2	6	4967864	4967869	0 %	33.33 %	33.33 %	33.33 %	24376230
72023	NC_004347	TCT	2	6	4968024	4968029	0 %	66.67 %	0 %	33.33 %	24376230
72024	NC_004347	GAC	2	6	4968151	4968156	33.33 %	0 %	33.33 %	33.33 %	24376230
72025	NC_004347	TTC	2	6	4968164	4968169	0 %	66.67 %	0 %	33.33 %	24376230
72026	NC_004347	GGAT	2	8	4968237	4968244	25 %	25 %	50 %	0 %	24376230
72027	NC_004347	TCGA	2	8	4968276	4968283	25 %	25 %	25 %	25 %	24376230
72028	NC_004347	T	6	6	4968289	4968294	0 %	100 %	0 %	0 %	24376230
72029	NC_004347	CAT	2	6	4968316	4968321	33.33 %	33.33 %	0 %	33.33 %	24376230
72030	NC_004347	CTA	2	6	4968322	4968327	33.33 %	33.33 %	0 %	33.33 %	24376230
72031	NC_004347	ATC	2	6	4968449	4968454	33.33 %	33.33 %	0 %	33.33 %	24376230
72032	NC_004347	TCA	2	6	4968477	4968482	33.33 %	33.33 %	0 %	33.33 %	24376230
72033	NC_004347	CTT	2	6	4968499	4968504	0 %	66.67 %	0 %	33.33 %	24376230
72034	NC_004347	ATG	2	6	4968520	4968525	33.33 %	33.33 %	33.33 %	0 %	24376230
72035	NC_004347	CTT	2	6	4968559	4968564	0 %	66.67 %	0 %	33.33 %	24376230
72036	NC_004347	AAAC	2	8	4968599	4968606	75 %	0 %	0 %	25 %	24376230
72037	NC_004347	TGGTTT	2	12	4968613	4968624	0 %	66.67 %	33.33 %	0 %	24376230
72038	NC_004347	AAT	2	6	4968655	4968660	66.67 %	33.33 %	0 %	0 %	24376230
72039	NC_004347	CGAA	2	8	4968716	4968723	50 %	0 %	25 %	25 %	24376230
72040	NC_004347	GAT	2	6	4968822	4968827	33.33 %	33.33 %	33.33 %	0 %	24376230
72041	NC_004347	ATCTT	2	10	4968846	4968855	20 %	60 %	0 %	20 %	24376230
72042	NC_004347	TCTA	2	8	4968914	4968921	25 %	50 %	0 %	25 %	24376230
72043	NC_004347	AAT	2	6	4968932	4968937	66.67 %	33.33 %	0 %	0 %	24376230
72044	NC_004347	T	6	6	4968946	4968951	0 %	100 %	0 %	0 %	24376230
72045	NC_004347	GAT	2	6	4968988	4968993	33.33 %	33.33 %	33.33 %	0 %	24376230
72046	NC_004347	GTG	3	9	4969087	4969095	0 %	33.33 %	66.67 %	0 %	24376230
72047	NC_004347	CCG	2	6	4969179	4969184	0 %	0 %	33.33 %	66.67 %	24376230
72048	NC_004347	CAG	2	6	4969231	4969236	33.33 %	0 %	33.33 %	33.33 %	24376230
72049	NC_004347	ACT	2	6	4969242	4969247	33.33 %	33.33 %	0 %	33.33 %	24376230
72050	NC_004347	CAA	2	6	4969309	4969314	66.67 %	0 %	0 %	33.33 %	24376230
72051	NC_004347	ATC	2	6	4969316	4969321	33.33 %	33.33 %	0 %	33.33 %	24376230
72052	NC_004347	TTG	2	6	4969328	4969333	0 %	66.67 %	33.33 %	0 %	24376230
72053	NC_004347	CTG	2	6	4969423	4969428	0 %	33.33 %	33.33 %	33.33 %	24376230
72054	NC_004347	AAT	2	6	4969596	4969601	66.67 %	33.33 %	0 %	0 %	24376230
72055	NC_004347	TGC	3	9	4969619	4969627	0 %	33.33 %	33.33 %	33.33 %	24376230
72056	NC_004347	ACC	3	9	4969652	4969660	33.33 %	0 %	0 %	66.67 %	24376230
72057	NC_004347	AAC	2	6	4969661	4969666	66.67 %	0 %	0 %	33.33 %	24376230
72058	NC_004347	ACCTT	2	10	4969698	4969707	20 %	40 %	0 %	40 %	24376230

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.