MICAS: Microsatellite Analysis Server 3.0

All Repeats of Streptomyces violaceusniger Tu 4113 plasmid pSTRVI02

Total Repeats: 5077

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
5001	NC_015952	TGG	2	6	188049	188054	0 %	33.33 %	66.67 %	0 %	345007955
5002	NC_015952	AGC	2	6	188058	188063	33.33 %	0 %	33.33 %	33.33 %	345007955
5003	NC_015952	CGCGAG	2	12	188084	188095	16.67 %	0 %	50 %	33.33 %	345007955
5004	NC_015952	GAG	2	6	188099	188104	33.33 %	0 %	66.67 %	0 %	345007955
5005	NC_015952	CCGCGA	2	12	188151	188162	16.67 %	0 %	33.33 %	50 %	345007955
5006	NC_015952	CCG	3	9	188163	188171	0 %	0 %	33.33 %	66.67 %	345007955
5007	NC_015952	CG	3	6	188224	188229	0 %	0 %	50 %	50 %	345007956
5008	NC_015952	GTC	2	6	188245	188250	0 %	33.33 %	33.33 %	33.33 %	345007956
5009	NC_015952	GGC	2	6	188251	188256	0 %	0 %	66.67 %	33.33 %	345007956
5010	NC_015952	CCGG	2	8	188304	188311	0 %	0 %	50 %	50 %	345007956
5011	NC_015952	CGG	2	6	188313	188318	0 %	0 %	66.67 %	33.33 %	345007956
5012	NC_015952	CGG	2	6	188346	188351	0 %	0 %	66.67 %	33.33 %	345007956
5013	NC_015952	GCA	2	6	188352	188357	33.33 %	0 %	33.33 %	33.33 %	345007956
5014	NC_015952	CGG	2	6	188405	188410	0 %	0 %	66.67 %	33.33 %	345007956
5015	NC_015952	AGC	2	6	188446	188451	33.33 %	0 %	33.33 %	33.33 %	345007956
5016	NC_015952	GCG	2	6	188510	188515	0 %	0 %	66.67 %	33.33 %	345007956
5017	NC_015952	GGA	2	6	188526	188531	33.33 %	0 %	66.67 %	0 %	345007956
5018	NC_015952	GCG	2	6	188547	188552	0 %	0 %	66.67 %	33.33 %	345007956
5019	NC_015952	CGC	2	6	188603	188608	0 %	0 %	33.33 %	66.67 %	345007956
5020	NC_015952	AG	3	6	188668	188673	50 %	0 %	50 %	0 %	Non-Coding
5021	NC_015952	GAC	2	6	188689	188694	33.33 %	0 %	33.33 %	33.33 %	345007957
5022	NC_015952	GCG	2	6	188702	188707	0 %	0 %	66.67 %	33.33 %	345007957
5023	NC_015952	CGG	2	6	188795	188800	0 %	0 %	66.67 %	33.33 %	345007957
5024	NC_015952	GGA	2	6	188842	188847	33.33 %	0 %	66.67 %	0 %	345007957
5025	NC_015952	GCT	2	6	188899	188904	0 %	33.33 %	33.33 %	33.33 %	345007957
5026	NC_015952	TGGTG	2	10	188922	188931	0 %	40 %	60 %	0 %	345007957
5027	NC_015952	CG	3	6	189031	189036	0 %	0 %	50 %	50 %	345007957
5028	NC_015952	CGT	2	6	189051	189056	0 %	33.33 %	33.33 %	33.33 %	345007957
5029	NC_015952	GTC	2	6	189078	189083	0 %	33.33 %	33.33 %	33.33 %	345007957
5030	NC_015952	CGA	3	9	189097	189105	33.33 %	0 %	33.33 %	33.33 %	345007957
5031	NC_015952	GAC	2	6	189106	189111	33.33 %	0 %	33.33 %	33.33 %	345007957
5032	NC_015952	GAC	2	6	189134	189139	33.33 %	0 %	33.33 %	33.33 %	345007957
5033	NC_015952	CAC	2	6	189140	189145	33.33 %	0 %	0 %	66.67 %	345007957
5034	NC_015952	GAC	3	9	189194	189202	33.33 %	0 %	33.33 %	33.33 %	345007957
5035	NC_015952	GAC	2	6	189264	189269	33.33 %	0 %	33.33 %	33.33 %	345007957
5036	NC_015952	AGG	2	6	189278	189283	33.33 %	0 %	66.67 %	0 %	345007958
5037	NC_015952	AGG	2	6	189317	189322	33.33 %	0 %	66.67 %	0 %	345007958
5038	NC_015952	CGGT	2	8	189325	189332	0 %	25 %	50 %	25 %	345007958
5039	NC_015952	CGG	3	9	189356	189364	0 %	0 %	66.67 %	33.33 %	345007958
5040	NC_015952	GCGA	2	8	189382	189389	25 %	0 %	50 %	25 %	345007958
5041	NC_015952	GTC	2	6	189478	189483	0 %	33.33 %	33.33 %	33.33 %	345007958
5042	NC_015952	TAC	2	6	189484	189489	33.33 %	33.33 %	0 %	33.33 %	345007958
5043	NC_015952	GTC	2	6	189514	189519	0 %	33.33 %	33.33 %	33.33 %	345007958
5044	NC_015952	GAC	2	6	189538	189543	33.33 %	0 %	33.33 %	33.33 %	345007958
5045	NC_015952	GTG	2	6	189547	189552	0 %	33.33 %	66.67 %	0 %	345007958
5046	NC_015952	CG	3	6	189618	189623	0 %	0 %	50 %	50 %	345007959
5047	NC_015952	GTC	2	6	189627	189632	0 %	33.33 %	33.33 %	33.33 %	345007959
5048	NC_015952	CTG	2	6	189699	189704	0 %	33.33 %	33.33 %	33.33 %	345007959
5049	NC_015952	GAG	2	6	189708	189713	33.33 %	0 %	66.67 %	0 %	345007959
5050	NC_015952	AGG	2	6	189757	189762	33.33 %	0 %	66.67 %	0 %	345007959
5051	NC_015952	AGG	2	6	189806	189811	33.33 %	0 %	66.67 %	0 %	345007960
5052	NC_015952	ACC	2	6	189877	189882	33.33 %	0 %	0 %	66.67 %	345007960
5053	NC_015952	GCT	2	6	189987	189992	0 %	33.33 %	33.33 %	33.33 %	345007960
5054	NC_015952	CGG	3	9	190001	190009	0 %	0 %	66.67 %	33.33 %	345007960
5055	NC_015952	CGC	2	6	190037	190042	0 %	0 %	33.33 %	66.67 %	345007961
5056	NC_015952	AGG	2	6	190045	190050	33.33 %	0 %	66.67 %	0 %	345007961
5057	NC_015952	GCG	2	6	190056	190061	0 %	0 %	66.67 %	33.33 %	345007961
5058	NC_015952	TCC	2	6	190072	190077	0 %	33.33 %	0 %	66.67 %	345007961
5059	NC_015952	CTG	2	6	190143	190148	0 %	33.33 %	33.33 %	33.33 %	345007961
5060	NC_015952	GAT	2	6	190229	190234	33.33 %	33.33 %	33.33 %	0 %	345007961
5061	NC_015952	TGC	2	6	190312	190317	0 %	33.33 %	33.33 %	33.33 %	345007961
5062	NC_015952	GCG	2	6	190376	190381	0 %	0 %	66.67 %	33.33 %	345007961
5063	NC_015952	CG	3	6	190380	190385	0 %	0 %	50 %	50 %	345007961
5064	NC_015952	GGTGC	2	10	190419	190428	0 %	20 %	60 %	20 %	345007961
5065	NC_015952	GGA	2	6	190463	190468	33.33 %	0 %	66.67 %	0 %	345007961
5066	NC_015952	CTT	2	6	190484	190489	0 %	66.67 %	0 %	33.33 %	345007961
5067	NC_015952	CGGG	2	8	190567	190574	0 %	0 %	75 %	25 %	345007961
5068	NC_015952	GTC	2	6	190583	190588	0 %	33.33 %	33.33 %	33.33 %	345007961
5069	NC_015952	GCG	2	6	190655	190660	0 %	0 %	66.67 %	33.33 %	345007961
5070	NC_015952	TAC	2	6	190763	190768	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5071	NC_015952	GCC	2	6	190785	190790	0 %	0 %	33.33 %	66.67 %	Non-Coding
5072	NC_015952	G	6	6	190797	190802	0 %	0 %	100 %	0 %	Non-Coding
5073	NC_015952	CGC	2	6	190817	190822	0 %	0 %	33.33 %	66.67 %	Non-Coding
5074	NC_015952	CGC	2	6	190829	190834	0 %	0 %	33.33 %	66.67 %	Non-Coding
5075	NC_015952	ATC	2	6	190842	190847	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5076	NC_015952	CGT	2	6	190853	190858	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5077	NC_015952	GGA	2	6	191025	191030	33.33 %	0 %	66.67 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.