MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Repeats of Staphylococcus aureus subsp. aureus COL plasmid pT181

Total Repeats: 65

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006629	TTC	2	6	261	266	0 %	66.67 %	0 %	33.33 %	57659842
2	NC_006629	ATA	2	6	416	421	66.67 %	33.33 %	0 %	0 %	57659842
3	NC_006629	GAT	2	6	476	481	33.33 %	33.33 %	33.33 %	0 %	57659842
4	NC_006629	ACT	2	6	489	494	33.33 %	33.33 %	0 %	33.33 %	57659842
5	NC_006629	TTA	2	6	591	596	33.33 %	66.67 %	0 %	0 %	57659842
6	NC_006629	TAA	2	6	604	609	66.67 %	33.33 %	0 %	0 %	57659842
7	NC_006629	TGG	2	6	693	698	0 %	33.33 %	66.67 %	0 %	57659842
8	NC_006629	TGA	2	6	799	804	33.33 %	33.33 %	33.33 %	0 %	57659842
9	NC_006629	AGA	2	6	805	810	66.67 %	0 %	33.33 %	0 %	57659842
10	NC_006629	AGG	2	6	1030	1035	33.33 %	0 %	66.67 %	0 %	Non-Coding
11	NC_006629	AAT	2	6	1090	1095	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_006629	TAC	2	6	1272	1277	33.33 %	33.33 %	0 %	33.33 %	57659841
13	NC_006629	CAG	2	6	1334	1339	33.33 %	0 %	33.33 %	33.33 %	57659841
14	NC_006629	ATT	2	6	1384	1389	33.33 %	66.67 %	0 %	0 %	57659841
15	NC_006629	CTG	2	6	1487	1492	0 %	33.33 %	33.33 %	33.33 %	57659841
16	NC_006629	TGG	2	6	1511	1516	0 %	33.33 %	66.67 %	0 %	57659841
17	NC_006629	AAT	2	6	1617	1622	66.67 %	33.33 %	0 %	0 %	57659841
18	NC_006629	TTA	2	6	1691	1696	33.33 %	66.67 %	0 %	0 %	57659841
19	NC_006629	CAA	2	6	1718	1723	66.67 %	0 %	0 %	33.33 %	57659841
20	NC_006629	TAT	2	6	1767	1772	33.33 %	66.67 %	0 %	0 %	57659841
21	NC_006629	TTA	2	6	1844	1849	33.33 %	66.67 %	0 %	0 %	57659841
22	NC_006629	TTA	2	6	1877	1882	33.33 %	66.67 %	0 %	0 %	57659841
23	NC_006629	TGG	2	6	1929	1934	0 %	33.33 %	66.67 %	0 %	57659841
24	NC_006629	TAG	2	6	1949	1954	33.33 %	33.33 %	33.33 %	0 %	57659841
25	NC_006629	ATG	2	6	1981	1986	33.33 %	33.33 %	33.33 %	0 %	57659841
26	NC_006629	TGG	2	6	2073	2078	0 %	33.33 %	66.67 %	0 %	57659841
27	NC_006629	ATT	2	6	2103	2108	33.33 %	66.67 %	0 %	0 %	57659841
28	NC_006629	ACT	2	6	2188	2193	33.33 %	33.33 %	0 %	33.33 %	57659841
29	NC_006629	AGT	2	6	2260	2265	33.33 %	33.33 %	33.33 %	0 %	57659841
30	NC_006629	GAA	3	9	2272	2280	66.67 %	0 %	33.33 %	0 %	57659841
31	NC_006629	AGG	2	6	2349	2354	33.33 %	0 %	66.67 %	0 %	57659841
32	NC_006629	ATT	2	6	2405	2410	33.33 %	66.67 %	0 %	0 %	57659841
33	NC_006629	TTA	2	6	2453	2458	33.33 %	66.67 %	0 %	0 %	57659841
34	NC_006629	TGT	2	6	2464	2469	0 %	66.67 %	33.33 %	0 %	57659841
35	NC_006629	ATT	2	6	2479	2484	33.33 %	66.67 %	0 %	0 %	57659841
36	NC_006629	TTA	2	6	2624	2629	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_006629	ATA	2	6	2785	2790	66.67 %	33.33 %	0 %	0 %	57659840
38	NC_006629	TAA	2	6	2852	2857	66.67 %	33.33 %	0 %	0 %	57659840
39	NC_006629	TAA	2	6	2867	2872	66.67 %	33.33 %	0 %	0 %	57659840
40	NC_006629	AGA	2	6	2993	2998	66.67 %	0 %	33.33 %	0 %	57659840
41	NC_006629	TAT	2	6	3061	3066	33.33 %	66.67 %	0 %	0 %	57659840
42	NC_006629	CAC	2	6	3094	3099	33.33 %	0 %	0 %	66.67 %	57659840
43	NC_006629	GTT	2	6	3114	3119	0 %	66.67 %	33.33 %	0 %	57659840
44	NC_006629	TGA	2	6	3128	3133	33.33 %	33.33 %	33.33 %	0 %	57659840
45	NC_006629	AAG	2	6	3151	3156	66.67 %	0 %	33.33 %	0 %	57659840
46	NC_006629	TAA	2	6	3164	3169	66.67 %	33.33 %	0 %	0 %	57659840
47	NC_006629	AAC	2	6	3214	3219	66.67 %	0 %	0 %	33.33 %	57659840
48	NC_006629	GGT	2	6	3453	3458	0 %	33.33 %	66.67 %	0 %	57659840
49	NC_006629	TGT	2	6	3491	3496	0 %	66.67 %	33.33 %	0 %	57659840
50	NC_006629	GCT	2	6	3540	3545	0 %	33.33 %	33.33 %	33.33 %	57659840
51	NC_006629	GAT	2	6	3594	3599	33.33 %	33.33 %	33.33 %	0 %	57659840
52	NC_006629	GAT	2	6	3624	3629	33.33 %	33.33 %	33.33 %	0 %	57659840
53	NC_006629	TTA	2	6	3630	3635	33.33 %	66.67 %	0 %	0 %	57659840
54	NC_006629	GAA	2	6	3775	3780	66.67 %	0 %	33.33 %	0 %	57659840
55	NC_006629	TAA	2	6	3800	3805	66.67 %	33.33 %	0 %	0 %	57659840
56	NC_006629	AGA	2	6	3812	3817	66.67 %	0 %	33.33 %	0 %	57659840
57	NC_006629	CAA	2	6	3894	3899	66.67 %	0 %	0 %	33.33 %	57659840
58	NC_006629	AAC	2	6	3901	3906	66.67 %	0 %	0 %	33.33 %	57659840
59	NC_006629	CAA	2	6	4057	4062	66.67 %	0 %	0 %	33.33 %	Non-Coding
60	NC_006629	GAA	2	6	4124	4129	66.67 %	0 %	33.33 %	0 %	Non-Coding
61	NC_006629	TAG	2	6	4188	4193	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_006629	ATA	2	6	4211	4216	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_006629	TAA	2	6	4278	4283	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_006629	CAT	2	6	4331	4336	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_006629	GTT	2	6	4357	4362	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.