MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f

Total Repeats: 47

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021911	CTCCGT	2	12	16499	16510	0 %	33.33 %	16.67 %	50 %	Non-Coding
2	NC_021911	ATCGCC	2	12	47781	47792	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
3	NC_021911	CCAATC	2	12	55451	55462	33.33 %	16.67 %	0 %	50 %	Non-Coding
4	NC_021911	GAATCG	2	12	89425	89436	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_021911	GGATGC	2	12	156190	156201	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
6	NC_021911	GCCTTC	2	12	182162	182173	0 %	33.33 %	16.67 %	50 %	Non-Coding
7	NC_021911	TCCGGC	2	12	183013	183024	0 %	16.67 %	33.33 %	50 %	Non-Coding
8	NC_021911	GACTTC	2	12	183331	183342	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
9	NC_021911	GGAAAC	2	12	183537	183548	50 %	0 %	33.33 %	16.67 %	Non-Coding
10	NC_021911	GATTGG	2	12	186705	186716	16.67 %	33.33 %	50 %	0 %	Non-Coding
11	NC_021911	CATGAC	2	12	192305	192316	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
12	NC_021911	GGCGCT	2	12	200250	200261	0 %	16.67 %	50 %	33.33 %	Non-Coding
13	NC_021911	CCTATG	2	12	200750	200761	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
14	NC_021911	GACGGA	2	12	205125	205136	33.33 %	0 %	50 %	16.67 %	Non-Coding
15	NC_021911	CGGTTT	2	12	222330	222341	0 %	50 %	33.33 %	16.67 %	Non-Coding
16	NC_021911	CACGCG	2	12	282508	282519	16.67 %	0 %	33.33 %	50 %	Non-Coding
17	NC_021911	CGTTTC	2	12	304570	304581	0 %	50 %	16.67 %	33.33 %	Non-Coding
18	NC_021911	TTTCTA	2	12	315608	315619	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
19	NC_021911	CTCTGT	2	12	320317	320328	0 %	50 %	16.67 %	33.33 %	Non-Coding
20	NC_021911	GATCCG	2	12	329195	329206	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
21	NC_021911	AAAATT	2	12	367253	367264	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_021911	CTATTT	2	12	370881	370892	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
23	NC_021911	TGCGAA	2	12	452719	452730	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
24	NC_021911	GGAAGG	2	12	467537	467548	33.33 %	0 %	66.67 %	0 %	Non-Coding
25	NC_021911	ATTGAA	2	12	474966	474977	50 %	33.33 %	16.67 %	0 %	Non-Coding
26	NC_021911	GCCGCG	2	12	479903	479914	0 %	0 %	50 %	50 %	Non-Coding
27	NC_021911	TGGCAT	2	12	480049	480060	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
28	NC_021911	GACGGA	2	12	586445	586456	33.33 %	0 %	50 %	16.67 %	Non-Coding
29	NC_021911	GCGATG	2	12	801920	801931	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
30	NC_021911	GCTTCC	2	12	802887	802898	0 %	33.33 %	16.67 %	50 %	Non-Coding
31	NC_021911	CAATCT	2	12	811529	811540	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_021911	ATAGGC	2	12	836389	836400	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
33	NC_021911	TCGCTC	2	12	836576	836587	0 %	33.33 %	16.67 %	50 %	Non-Coding
34	NC_021911	TGCAAA	2	12	847043	847054	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
35	NC_021911	AATTTA	2	12	856716	856727	50 %	50 %	0 %	0 %	Non-Coding
36	NC_021911	GCATAG	2	12	858359	858370	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
37	NC_021911	AGCGCC	2	12	858860	858871	16.67 %	0 %	33.33 %	50 %	Non-Coding
38	NC_021911	CTGATG	2	12	866423	866434	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
39	NC_021911	CGATGA	2	12	938503	938514	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
40	NC_021911	ATCGAT	2	12	947957	947968	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
41	NC_021911	GCTCGG	2	12	948606	948617	0 %	16.67 %	50 %	33.33 %	Non-Coding
42	NC_021911	GTTCGA	2	12	960071	960082	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
43	NC_021911	TAGCGC	2	12	974439	974450	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
44	NC_021911	GCGCAA	2	12	1006817	1006828	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
45	NC_021911	GATCTA	2	12	1010962	1010973	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
46	NC_021911	AGGCTC	2	12	1041556	1041567	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
47	NC_021911	TCAGTG	2	12	1051831	1051842	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.