MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Rhodospirillum rubrum ATCC 11170 plasmid unnamed

Total Repeats: 81

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007641	ACG	2	6	45	50	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_007641	GAG	2	6	76	81	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_007641	CTC	2	6	118	123	0 %	33.33 %	0 %	66.67 %	Non-Coding
4	NC_007641	GGT	2	6	247	252	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_007641	TTA	2	6	1237	1242	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_007641	CAA	2	6	3019	3024	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_007641	ATT	2	6	5192	5197	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_007641	ATC	2	6	10031	10036	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_007641	GTC	2	6	10062	10067	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_007641	TTG	2	6	10115	10120	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_007641	CGA	2	6	10158	10163	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_007641	GCC	2	6	10164	10169	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_007641	CTT	2	6	10213	10218	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_007641	CCT	2	6	10342	10347	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_007641	GTG	2	6	10407	10412	0 %	33.33 %	66.67 %	0 %	Non-Coding
16	NC_007641	GAT	2	6	10431	10436	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_007641	CAT	2	6	10463	10468	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_007641	GGC	2	6	10474	10479	0 %	0 %	66.67 %	33.33 %	Non-Coding
19	NC_007641	GGT	2	6	10490	10495	0 %	33.33 %	66.67 %	0 %	Non-Coding
20	NC_007641	CGA	2	6	10499	10504	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_007641	CGC	2	6	10828	10833	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_007641	CGC	2	6	11856	11861	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_007641	CTT	2	6	11862	11867	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_007641	CAT	2	6	11873	11878	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_007641	CTT	2	6	12063	12068	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_007641	TCC	2	6	12099	12104	0 %	33.33 %	0 %	66.67 %	Non-Coding
27	NC_007641	TTA	2	6	12105	12110	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_007641	TTG	2	6	12279	12284	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_007641	TAC	2	6	12297	12302	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_007641	TTG	2	6	13040	13045	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_007641	CTG	2	6	13373	13378	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
32	NC_007641	GGT	2	6	13397	13402	0 %	33.33 %	66.67 %	0 %	Non-Coding
33	NC_007641	AAG	2	6	13679	13684	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_007641	GCG	2	6	15023	15028	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_007641	TCG	2	6	15352	15357	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_007641	ACC	2	6	15361	15366	33.33 %	0 %	0 %	66.67 %	Non-Coding
37	NC_007641	GCC	2	6	15377	15382	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_007641	GAT	2	6	15387	15392	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_007641	CAT	2	6	15419	15424	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_007641	CAG	2	6	16257	16262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_007641	CGG	2	6	16322	16327	0 %	0 %	66.67 %	33.33 %	Non-Coding
42	NC_007641	GTT	2	6	16338	16343	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_007641	CTT	2	6	16372	16377	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_007641	TTC	2	6	17393	17398	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_007641	ATC	2	6	18223	18228	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_007641	CCG	2	6	20494	20499	0 %	0 %	33.33 %	66.67 %	Non-Coding
47	NC_007641	CGC	2	6	20515	20520	0 %	0 %	33.33 %	66.67 %	Non-Coding
48	NC_007641	ATC	2	6	20720	20725	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_007641	TTC	2	6	20852	20857	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_007641	GCG	2	6	20909	20914	0 %	0 %	66.67 %	33.33 %	Non-Coding
51	NC_007641	GCG	3	9	21289	21297	0 %	0 %	66.67 %	33.33 %	Non-Coding
52	NC_007641	GGC	2	6	21764	21769	0 %	0 %	66.67 %	33.33 %	Non-Coding
53	NC_007641	AAG	2	6	22482	22487	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_007641	GCC	2	6	22762	22767	0 %	0 %	33.33 %	66.67 %	Non-Coding
55	NC_007641	TCG	2	6	22780	22785	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_007641	GAA	2	6	24177	24182	66.67 %	0 %	33.33 %	0 %	Non-Coding
57	NC_007641	AAG	2	6	24453	24458	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_007641	CTT	2	6	25279	25284	0 %	66.67 %	0 %	33.33 %	Non-Coding
59	NC_007641	GCT	2	6	25377	25382	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
60	NC_007641	GGC	2	6	25400	25405	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_007641	GCA	3	9	28691	28699	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_007641	TCT	2	6	28766	28771	0 %	66.67 %	0 %	33.33 %	Non-Coding
63	NC_007641	TGA	2	6	30397	30402	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_007641	TCC	2	6	32003	32008	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_007641	GAG	2	6	32036	32041	33.33 %	0 %	66.67 %	0 %	Non-Coding
66	NC_007641	GAA	2	6	32393	32398	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_007641	TCC	2	6	33262	33267	0 %	33.33 %	0 %	66.67 %	Non-Coding
68	NC_007641	GCC	2	6	35115	35120	0 %	0 %	33.33 %	66.67 %	Non-Coding
69	NC_007641	ACG	2	6	35162	35167	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
70	NC_007641	AGG	2	6	35293	35298	33.33 %	0 %	66.67 %	0 %	Non-Coding
71	NC_007641	CCT	2	6	35309	35314	0 %	33.33 %	0 %	66.67 %	Non-Coding
72	NC_007641	GAC	2	6	38104	38109	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
73	NC_007641	TCT	2	6	38111	38116	0 %	66.67 %	0 %	33.33 %	Non-Coding
74	NC_007641	CCG	2	6	38299	38304	0 %	0 %	33.33 %	66.67 %	Non-Coding
75	NC_007641	AGG	2	6	38309	38314	33.33 %	0 %	66.67 %	0 %	Non-Coding
76	NC_007641	ACC	2	6	43695	43700	33.33 %	0 %	0 %	66.67 %	Non-Coding
77	NC_007641	CGA	2	6	44370	44375	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_007641	GAC	2	6	46705	46710	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
79	NC_007641	GAT	2	6	48118	48123	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
80	NC_007641	GAT	2	6	48131	48136	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
81	NC_007641	CCG	2	6	53673	53678	0 %	0 %	33.33 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.