MICAS: Microsatellite Analysis Server 3.0

All Coding Repeats of Rhizobium etli CFN 42 plasmid p42a

Total Repeats: 3114

< Previous1234567Next >

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
3001	NC_007762	CGA	2	6	188275	188280	33.33 %	0 %	33.33 %	33.33 %	86359875
3002	NC_007762	GCC	2	6	188296	188301	0 %	0 %	33.33 %	66.67 %	86359875
3003	NC_007762	CGC	2	6	188320	188325	0 %	0 %	33.33 %	66.67 %	86359875
3004	NC_007762	CCG	2	6	188340	188345	0 %	0 %	33.33 %	66.67 %	86359875
3005	NC_007762	GACCG	2	10	188381	188390	20 %	0 %	40 %	40 %	86359875
3006	NC_007762	CTG	2	6	188408	188413	0 %	33.33 %	33.33 %	33.33 %	86359875
3007	NC_007762	GCC	2	6	188438	188443	0 %	0 %	33.33 %	66.67 %	86359875
3008	NC_007762	GAG	2	6	188492	188497	33.33 %	0 %	66.67 %	0 %	86359875
3009	NC_007762	GC	3	6	188532	188537	0 %	0 %	50 %	50 %	86359876
3010	NC_007762	TTC	2	6	188544	188549	0 %	66.67 %	0 %	33.33 %	86359876
3011	NC_007762	GCC	2	6	188580	188585	0 %	0 %	33.33 %	66.67 %	86359876
3012	NC_007762	CGC	2	6	188620	188625	0 %	0 %	33.33 %	66.67 %	86359876
3013	NC_007762	CG	3	6	188627	188632	0 %	0 %	50 %	50 %	86359876
3014	NC_007762	TGGC	2	8	188695	188702	0 %	25 %	50 %	25 %	86359876
3015	NC_007762	CGG	2	6	188705	188710	0 %	0 %	66.67 %	33.33 %	86359876
3016	NC_007762	GGC	2	6	188723	188728	0 %	0 %	66.67 %	33.33 %	86359876
3017	NC_007762	ATGG	2	8	188754	188761	25 %	25 %	50 %	0 %	86359876
3018	NC_007762	CCT	2	6	188770	188775	0 %	33.33 %	0 %	66.67 %	86359876
3019	NC_007762	CGATC	2	10	188840	188849	20 %	20 %	20 %	40 %	86359876
3020	NC_007762	CGG	2	6	188927	188932	0 %	0 %	66.67 %	33.33 %	86359876
3021	NC_007762	CGG	2	6	188945	188950	0 %	0 %	66.67 %	33.33 %	86359876
3022	NC_007762	TCC	2	6	188953	188958	0 %	33.33 %	0 %	66.67 %	86359876
3023	NC_007762	CGT	2	6	189021	189026	0 %	33.33 %	33.33 %	33.33 %	86359876
3024	NC_007762	GAT	3	9	189051	189059	33.33 %	33.33 %	33.33 %	0 %	86359876
3025	NC_007762	CGA	2	6	189069	189074	33.33 %	0 %	33.33 %	33.33 %	86359876
3026	NC_007762	TCA	2	6	189110	189115	33.33 %	33.33 %	0 %	33.33 %	86359876
3027	NC_007762	TCG	2	6	189133	189138	0 %	33.33 %	33.33 %	33.33 %	86359876
3028	NC_007762	CGC	2	6	189160	189165	0 %	0 %	33.33 %	66.67 %	86359876
3029	NC_007762	CGA	2	6	189188	189193	33.33 %	0 %	33.33 %	33.33 %	86359876
3030	NC_007762	CAA	2	6	189201	189206	66.67 %	0 %	0 %	33.33 %	86359876
3031	NC_007762	GAT	2	6	189246	189251	33.33 %	33.33 %	33.33 %	0 %	86359876
3032	NC_007762	GCT	2	6	189254	189259	0 %	33.33 %	33.33 %	33.33 %	86359876
3033	NC_007762	ACG	2	6	189403	189408	33.33 %	0 %	33.33 %	33.33 %	86359876
3034	NC_007762	GTC	2	6	189414	189419	0 %	33.33 %	33.33 %	33.33 %	86359876
3035	NC_007762	CCT	2	6	189449	189454	0 %	33.33 %	0 %	66.67 %	86359876
3036	NC_007762	GCT	2	6	189512	189517	0 %	33.33 %	33.33 %	33.33 %	86359877
3037	NC_007762	TCT	2	6	189621	189626	0 %	66.67 %	0 %	33.33 %	86359877
3038	NC_007762	GAT	2	6	189736	189741	33.33 %	33.33 %	33.33 %	0 %	86359877
3039	NC_007762	ATC	2	6	189833	189838	33.33 %	33.33 %	0 %	33.33 %	86359877
3040	NC_007762	AGC	2	6	189869	189874	33.33 %	0 %	33.33 %	33.33 %	86359877
3041	NC_007762	GAA	2	6	189915	189920	66.67 %	0 %	33.33 %	0 %	86359877
3042	NC_007762	CCG	2	6	190008	190013	0 %	0 %	33.33 %	66.67 %	86359877
3043	NC_007762	CCCAA	2	10	190026	190035	40 %	0 %	0 %	60 %	86359877
3044	NC_007762	TGG	2	6	190064	190069	0 %	33.33 %	66.67 %	0 %	86359877
3045	NC_007762	GGA	2	6	190077	190082	33.33 %	0 %	66.67 %	0 %	86359877
3046	NC_007762	CTC	2	6	190624	190629	0 %	33.33 %	0 %	66.67 %	86359878
3047	NC_007762	AGA	2	6	190632	190637	66.67 %	0 %	33.33 %	0 %	86359878
3048	NC_007762	GCC	2	6	190664	190669	0 %	0 %	33.33 %	66.67 %	86359878
3049	NC_007762	GT	3	6	190680	190685	0 %	50 %	50 %	0 %	86359878
3050	NC_007762	AAGA	2	8	190699	190706	75 %	0 %	25 %	0 %	86359878
3051	NC_007762	GGCG	2	8	190714	190721	0 %	0 %	75 %	25 %	86359878
3052	NC_007762	CGG	2	6	190754	190759	0 %	0 %	66.67 %	33.33 %	86359878
3053	NC_007762	ATCA	2	8	190778	190785	50 %	25 %	0 %	25 %	86359878
3054	NC_007762	CGA	2	6	190790	190795	33.33 %	0 %	33.33 %	33.33 %	86359878
3055	NC_007762	CTG	2	6	190796	190801	0 %	33.33 %	33.33 %	33.33 %	86359878
3056	NC_007762	GTTC	2	8	190834	190841	0 %	50 %	25 %	25 %	86359878
3057	NC_007762	GAC	2	6	190909	190914	33.33 %	0 %	33.33 %	33.33 %	86359878
3058	NC_007762	TGC	2	6	191053	191058	0 %	33.33 %	33.33 %	33.33 %	86359878
3059	NC_007762	AGCG	2	8	191072	191079	25 %	0 %	50 %	25 %	86359878
3060	NC_007762	TC	3	6	191086	191091	0 %	50 %	0 %	50 %	86359878
3061	NC_007762	GCGCTG	2	12	191187	191198	0 %	16.67 %	50 %	33.33 %	86359878
3062	NC_007762	GC	3	6	191219	191224	0 %	0 %	50 %	50 %	86359878
3063	NC_007762	GCA	3	9	191228	191236	33.33 %	0 %	33.33 %	33.33 %	86359878
3064	NC_007762	ACG	2	6	191259	191264	33.33 %	0 %	33.33 %	33.33 %	86359878
3065	NC_007762	TCG	2	6	191265	191270	0 %	33.33 %	33.33 %	33.33 %	86359878
3066	NC_007762	CGC	2	6	191283	191288	0 %	0 %	33.33 %	66.67 %	86359878
3067	NC_007762	GAT	2	6	191332	191337	33.33 %	33.33 %	33.33 %	0 %	86359878
3068	NC_007762	TCG	2	6	191369	191374	0 %	33.33 %	33.33 %	33.33 %	86359878
3069	NC_007762	TGA	2	6	191391	191396	33.33 %	33.33 %	33.33 %	0 %	86359878
3070	NC_007762	CCT	2	6	191404	191409	0 %	33.33 %	0 %	66.67 %	86359878
3071	NC_007762	CGG	2	6	191428	191433	0 %	0 %	66.67 %	33.33 %	86359878
3072	NC_007762	TCT	2	6	191461	191466	0 %	66.67 %	0 %	33.33 %	86359878
3073	NC_007762	CTC	2	6	191513	191518	0 %	33.33 %	0 %	66.67 %	86359878
3074	NC_007762	AGGA	2	8	191829	191836	50 %	0 %	50 %	0 %	86359879
3075	NC_007762	GAA	2	6	191858	191863	66.67 %	0 %	33.33 %	0 %	86359879
3076	NC_007762	TCA	2	6	191880	191885	33.33 %	33.33 %	0 %	33.33 %	86359879
3077	NC_007762	CAG	3	9	191985	191993	33.33 %	0 %	33.33 %	33.33 %	86359879
3078	NC_007762	TCG	2	6	192052	192057	0 %	33.33 %	33.33 %	33.33 %	86359879
3079	NC_007762	CGAT	2	8	192067	192074	25 %	25 %	25 %	25 %	86359879
3080	NC_007762	GTC	2	6	192187	192192	0 %	33.33 %	33.33 %	33.33 %	86359879
3081	NC_007762	GGC	2	6	192203	192208	0 %	0 %	66.67 %	33.33 %	86359879
3082	NC_007762	GCC	2	6	192220	192225	0 %	0 %	33.33 %	66.67 %	86359879
3083	NC_007762	GAC	2	6	192348	192353	33.33 %	0 %	33.33 %	33.33 %	86359879
3084	NC_007762	CGA	2	6	192367	192372	33.33 %	0 %	33.33 %	33.33 %	86359879
3085	NC_007762	GCG	2	6	192378	192383	0 %	0 %	66.67 %	33.33 %	86359879
3086	NC_007762	GGA	2	6	192440	192445	33.33 %	0 %	66.67 %	0 %	86359879
3087	NC_007762	ATTG	2	8	192455	192462	25 %	50 %	25 %	0 %	86359879
3088	NC_007762	CG	4	8	192483	192490	0 %	0 %	50 %	50 %	86359879
3089	NC_007762	CTC	2	6	192515	192520	0 %	33.33 %	0 %	66.67 %	86359879
3090	NC_007762	CG	3	6	192587	192592	0 %	0 %	50 %	50 %	86359879
3091	NC_007762	CGAGC	2	10	192620	192629	20 %	0 %	40 %	40 %	86359879
3092	NC_007762	CG	3	6	192637	192642	0 %	0 %	50 %	50 %	86359879
3093	NC_007762	GGAC	2	8	192649	192656	25 %	0 %	50 %	25 %	86359879
3094	NC_007762	GTC	2	6	192738	192743	0 %	33.33 %	33.33 %	33.33 %	86359879
3095	NC_007762	GTTT	2	8	192758	192765	0 %	75 %	25 %	0 %	86359879
3096	NC_007762	GCG	2	6	193050	193055	0 %	0 %	66.67 %	33.33 %	86359880
3097	NC_007762	CG	3	6	193155	193160	0 %	0 %	50 %	50 %	86359880
3098	NC_007762	ACG	2	6	193309	193314	33.33 %	0 %	33.33 %	33.33 %	86359880
3099	NC_007762	GCT	2	6	193446	193451	0 %	33.33 %	33.33 %	33.33 %	86359880
3100	NC_007762	GAA	2	6	193462	193467	66.67 %	0 %	33.33 %	0 %	86359880
3101	NC_007762	TCA	2	6	193482	193487	33.33 %	33.33 %	0 %	33.33 %	86359880
3102	NC_007762	GAA	2	6	193495	193500	66.67 %	0 %	33.33 %	0 %	86359880
3103	NC_007762	CG	3	6	193539	193544	0 %	0 %	50 %	50 %	86359880
3104	NC_007762	CCG	2	6	193568	193573	0 %	0 %	33.33 %	66.67 %	86359880
3105	NC_007762	GAG	2	6	193579	193584	33.33 %	0 %	66.67 %	0 %	86359880
3106	NC_007762	TTG	2	6	193622	193627	0 %	66.67 %	33.33 %	0 %	86359880
3107	NC_007762	GAA	2	6	193684	193689	66.67 %	0 %	33.33 %	0 %	86359880
3108	NC_007762	TTG	2	6	193720	193725	0 %	66.67 %	33.33 %	0 %	86359880
3109	NC_007762	CGG	2	6	193947	193952	0 %	0 %	66.67 %	33.33 %	86359880
3110	NC_007762	GCC	2	6	193981	193986	0 %	0 %	33.33 %	66.67 %	86359880
3111	NC_007762	GTTC	2	8	193996	194003	0 %	50 %	25 %	25 %	86359880
3112	NC_007762	GCC	2	6	194065	194070	0 %	0 %	33.33 %	66.67 %	86359880
3113	NC_007762	CG	3	6	194142	194147	0 %	0 %	50 %	50 %	86359880
3114	NC_007762	CGG	2	6	194202	194207	0 %	0 %	66.67 %	33.33 %	86359880

< Previous1234567Next >

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.