MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Pediococcus claussenii ATCC BAA-344 plasmid pPECL-4

Total Repeats: 48

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016607	TGC	2	6	1636	1641	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_016607	CTC	2	6	1678	1683	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_016607	TTG	2	6	1684	1689	0 %	66.67 %	33.33 %	0 %	Non-Coding
4	NC_016607	ATA	2	6	2328	2333	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_016607	CCT	2	6	3528	3533	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_016607	TAA	2	6	3844	3849	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_016607	CAG	2	6	3915	3920	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_016607	TGA	2	6	3973	3978	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_016607	ACT	2	6	4021	4026	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_016607	CAA	2	6	4049	4054	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_016607	GCG	2	6	4057	4062	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_016607	TGA	2	6	4141	4146	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_016607	ACT	2	6	4233	4238	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_016607	TGG	2	6	4271	4276	0 %	33.33 %	66.67 %	0 %	Non-Coding
15	NC_016607	GAA	2	6	4316	4321	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_016607	TGG	2	6	4469	4474	0 %	33.33 %	66.67 %	0 %	Non-Coding
17	NC_016607	AAG	2	6	4684	4689	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_016607	AGT	2	6	4730	4735	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_016607	TAA	2	6	5063	5068	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_016607	TGA	2	6	5079	5084	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_016607	AAT	2	6	5884	5889	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_016607	AGA	2	6	5985	5990	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_016607	AAC	2	6	6025	6030	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_016607	ACA	2	6	6085	6090	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_016607	AGA	2	6	8260	8265	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_016607	TCA	2	6	8271	8276	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_016607	AAC	2	6	8833	8838	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_016607	GCT	2	6	8919	8924	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_016607	TTA	2	6	8925	8930	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_016607	GCG	2	6	8988	8993	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_016607	AAC	2	6	9023	9028	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_016607	AAC	2	6	9236	9241	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_016607	GAA	2	6	9375	9380	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_016607	CAA	2	6	9439	9444	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_016607	GTT	2	6	9464	9469	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_016607	TAT	2	6	9504	9509	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_016607	AGG	2	6	14873	14878	33.33 %	0 %	66.67 %	0 %	Non-Coding
38	NC_016607	GAT	2	6	17858	17863	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_016607	ATT	2	6	20065	20070	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_016607	GAA	2	6	20206	20211	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_016607	GGT	2	6	21017	21022	0 %	33.33 %	66.67 %	0 %	Non-Coding
42	NC_016607	CAT	2	6	21059	21064	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_016607	ATG	2	6	21085	21090	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_016607	ACA	2	6	21222	21227	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_016607	AAG	2	6	21258	21263	66.67 %	0 %	33.33 %	0 %	Non-Coding
46	NC_016607	CAC	2	6	22635	22640	33.33 %	0 %	0 %	66.67 %	Non-Coding
47	NC_016607	TTG	2	6	22687	22692	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_016607	GTG	2	6	23019	23024	0 %	33.33 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.