MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Methylophaga sp. JAM7 plasmid unnamed

Total Repeats: 76

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017858	CGC	2	6	2423	2428	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_017858	TCC	2	6	2497	2502	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_017858	CAG	2	6	2600	2605	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_017858	CGC	2	6	2606	2611	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_017858	GTT	2	6	2677	2682	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_017858	TAA	2	6	2714	2719	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017858	TAA	2	6	2798	2803	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017858	TAA	2	6	2818	2823	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017858	CGC	2	6	2843	2848	0 %	0 %	33.33 %	66.67 %	Non-Coding
10	NC_017858	CAA	2	6	2880	2885	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_017858	ACC	3	9	2894	2902	33.33 %	0 %	0 %	66.67 %	Non-Coding
12	NC_017858	GAA	2	6	2983	2988	66.67 %	0 %	33.33 %	0 %	Non-Coding
13	NC_017858	GCG	2	6	3000	3005	0 %	0 %	66.67 %	33.33 %	Non-Coding
14	NC_017858	GCC	2	6	3051	3056	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_017858	GGA	2	6	3259	3264	33.33 %	0 %	66.67 %	0 %	Non-Coding
16	NC_017858	AAG	2	6	3411	3416	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_017858	CAG	2	6	3583	3588	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_017858	CAG	2	6	3710	3715	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_017858	CCT	2	6	5159	5164	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_017858	ATC	2	6	6180	6185	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_017858	TCG	2	6	12261	12266	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_017858	GCC	2	6	14984	14989	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_017858	TTA	2	6	15994	15999	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017858	TCT	2	6	16019	16024	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_017858	ATG	2	6	16050	16055	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_017858	ATT	2	6	16154	16159	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017858	AAG	2	6	16188	16193	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NC_017858	ATT	3	9	16195	16203	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_017858	CAG	2	6	16215	16220	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_017858	GCA	2	6	18328	18333	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_017858	AAT	3	9	18593	18601	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017858	TTG	2	6	18651	18656	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_017858	CCA	2	6	18668	18673	33.33 %	0 %	0 %	66.67 %	Non-Coding
34	NC_017858	GGC	2	6	18679	18684	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_017858	ACA	2	6	18744	18749	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_017858	GGT	2	6	20300	20305	0 %	33.33 %	66.67 %	0 %	Non-Coding
37	NC_017858	CCG	2	6	20402	20407	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_017858	TGC	2	6	20446	20451	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_017858	GGT	2	6	21135	21140	0 %	33.33 %	66.67 %	0 %	Non-Coding
40	NC_017858	CGC	2	6	22931	22936	0 %	0 %	33.33 %	66.67 %	Non-Coding
41	NC_017858	AAC	2	6	23017	23022	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_017858	GAA	2	6	23236	23241	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_017858	CCA	2	6	24720	24725	33.33 %	0 %	0 %	66.67 %	Non-Coding
44	NC_017858	ACA	2	6	26104	26109	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_017858	TTA	2	6	26122	26127	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_017858	GCA	2	6	26790	26795	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_017858	GTA	2	6	26851	26856	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_017858	AAT	2	6	26878	26883	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017858	TCC	2	6	26885	26890	0 %	33.33 %	0 %	66.67 %	Non-Coding
50	NC_017858	CTA	2	6	26915	26920	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_017858	TCC	2	6	26972	26977	0 %	33.33 %	0 %	66.67 %	Non-Coding
52	NC_017858	GAA	2	6	27087	27092	66.67 %	0 %	33.33 %	0 %	Non-Coding
53	NC_017858	CAG	2	6	27098	27103	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_017858	CTT	2	6	27201	27206	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_017858	AGT	2	6	27212	27217	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_017858	TAT	2	6	27515	27520	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017858	CAA	2	6	27541	27546	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_017858	CCA	2	6	27590	27595	33.33 %	0 %	0 %	66.67 %	Non-Coding
59	NC_017858	CGG	2	6	39158	39163	0 %	0 %	66.67 %	33.33 %	Non-Coding
60	NC_017858	CCG	2	6	39245	39250	0 %	0 %	33.33 %	66.67 %	Non-Coding
61	NC_017858	CAA	2	6	39314	39319	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_017858	TAG	2	6	39420	39425	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_017858	GCG	2	6	42864	42869	0 %	0 %	66.67 %	33.33 %	Non-Coding
64	NC_017858	TAA	2	6	42990	42995	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_017858	GTA	2	6	44014	44019	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_017858	TGT	2	6	44020	44025	0 %	66.67 %	33.33 %	0 %	Non-Coding
67	NC_017858	TAT	2	6	44032	44037	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_017858	ACA	2	6	44041	44046	66.67 %	0 %	0 %	33.33 %	Non-Coding
69	NC_017858	TAC	2	6	44047	44052	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_017858	GCT	2	6	44275	44280	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
71	NC_017858	GCC	2	6	44337	44342	0 %	0 %	33.33 %	66.67 %	Non-Coding
72	NC_017858	GTT	2	6	46471	46476	0 %	66.67 %	33.33 %	0 %	Non-Coding
73	NC_017858	GCC	2	6	46495	46500	0 %	0 %	33.33 %	66.67 %	Non-Coding
74	NC_017858	ACA	2	6	46505	46510	66.67 %	0 %	0 %	33.33 %	Non-Coding
75	NC_017858	CGC	2	6	47771	47776	0 %	0 %	33.33 %	66.67 %	Non-Coding
76	NC_017858	TCG	3	9	47807	47815	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.