MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Methanocaldococcus sp. FS406-22 plasmid pFS01

Total Repeats: 46

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013888	TAA	2	6	89	94	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_013888	ATG	2	6	333	338	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_013888	TAT	3	9	988	996	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_013888	GTG	3	9	999	1007	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_013888	TAA	2	6	1214	1219	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_013888	TCC	2	6	1364	1369	0 %	33.33 %	0 %	66.67 %	Non-Coding
7	NC_013888	AAC	2	6	1385	1390	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_013888	TCC	2	6	1435	1440	0 %	33.33 %	0 %	66.67 %	Non-Coding
9	NC_013888	TCC	2	6	1504	1509	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_013888	AAG	2	6	1542	1547	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_013888	TCC	2	6	1574	1579	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_013888	TAG	2	6	1617	1622	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_013888	TCC	2	6	1642	1647	0 %	33.33 %	0 %	66.67 %	Non-Coding
14	NC_013888	TAA	2	6	1750	1755	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_013888	ATC	2	6	1873	1878	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_013888	TTA	2	6	2066	2071	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_013888	TAA	2	6	2104	2109	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_013888	AAT	2	6	2124	2129	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_013888	TTA	2	6	2190	2195	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_013888	TTA	2	6	2199	2204	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_013888	AAC	2	6	2247	2252	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_013888	ATT	2	6	2310	2315	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_013888	ACA	2	6	2421	2426	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_013888	ATT	2	6	2751	2756	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_013888	CCA	2	6	4054	4059	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_013888	TGT	2	6	4179	4184	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_013888	GTG	2	6	4190	4195	0 %	33.33 %	66.67 %	0 %	Non-Coding
28	NC_013888	AAT	2	6	4237	4242	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_013888	CGT	2	6	4259	4264	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_013888	ACG	2	6	4283	4288	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_013888	GTT	2	6	4515	4520	0 %	66.67 %	33.33 %	0 %	Non-Coding
32	NC_013888	TCC	2	6	4573	4578	0 %	33.33 %	0 %	66.67 %	Non-Coding
33	NC_013888	CCT	2	6	4584	4589	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_013888	GAG	2	6	4845	4850	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_013888	TTA	2	6	4879	4884	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_013888	TTA	2	6	5204	5209	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_013888	TAG	2	6	5262	5267	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_013888	TTA	2	6	5638	5643	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_013888	CTG	2	6	8054	8059	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_013888	TAG	2	6	9115	9120	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_013888	CTG	2	6	11761	11766	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_013888	TTA	2	6	11818	11823	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_013888	TAA	2	6	11828	11833	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_013888	GAA	2	6	11929	11934	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_013888	GTT	2	6	11965	11970	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_013888	GTT	2	6	12152	12157	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.