MICAS: Microsatellite Analysis Server 3.0

All Repeats of Megasphaera elsdenii DSM 20460

Total Repeats: 53626

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
53501	NC_015873	CTT	2	6	2468265	2468270	0 %	66.67 %	0 %	33.33 %	348027466
53502	NC_015873	TGA	2	6	2468363	2468368	33.33 %	33.33 %	33.33 %	0 %	348027466
53503	NC_015873	CCTGGC	2	12	2468424	2468435	0 %	16.67 %	33.33 %	50 %	348027466
53504	NC_015873	GCC	2	6	2468477	2468482	0 %	0 %	33.33 %	66.67 %	348027466
53505	NC_015873	TTG	2	6	2468494	2468499	0 %	66.67 %	33.33 %	0 %	348027466
53506	NC_015873	TCT	2	6	2468516	2468521	0 %	66.67 %	0 %	33.33 %	348027466
53507	NC_015873	GTC	2	6	2468536	2468541	0 %	33.33 %	33.33 %	33.33 %	348027466
53508	NC_015873	TTCC	2	8	2468542	2468549	0 %	50 %	0 %	50 %	348027466
53509	NC_015873	TCA	2	6	2468552	2468557	33.33 %	33.33 %	0 %	33.33 %	348027466
53510	NC_015873	TCG	2	6	2468558	2468563	0 %	33.33 %	33.33 %	33.33 %	348027466
53511	NC_015873	TCA	2	6	2468594	2468599	33.33 %	33.33 %	0 %	33.33 %	348027466
53512	NC_015873	CAT	2	6	2468628	2468633	33.33 %	33.33 %	0 %	33.33 %	348027466
53513	NC_015873	GCC	2	6	2468644	2468649	0 %	0 %	33.33 %	66.67 %	348027466
53514	NC_015873	GAA	2	6	2468662	2468667	66.67 %	0 %	33.33 %	0 %	348027466
53515	NC_015873	GGCC	2	8	2468729	2468736	0 %	0 %	50 %	50 %	348027466
53516	NC_015873	GCCCTG	2	12	2468782	2468793	0 %	16.67 %	33.33 %	50 %	348027466
53517	NC_015873	CGC	2	6	2468814	2468819	0 %	0 %	33.33 %	66.67 %	348027466
53518	NC_015873	TCA	2	6	2468840	2468845	33.33 %	33.33 %	0 %	33.33 %	348027466
53519	NC_015873	GAA	2	6	2468872	2468877	66.67 %	0 %	33.33 %	0 %	348027466
53520	NC_015873	CGC	2	6	2468883	2468888	0 %	0 %	33.33 %	66.67 %	348027466
53521	NC_015873	GCC	2	6	2468902	2468907	0 %	0 %	33.33 %	66.67 %	348027466
53522	NC_015873	CAT	2	6	2468913	2468918	33.33 %	33.33 %	0 %	33.33 %	348027466
53523	NC_015873	GAA	2	6	2468964	2468969	66.67 %	0 %	33.33 %	0 %	348027466
53524	NC_015873	CAT	2	6	2469067	2469072	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53525	NC_015873	ATGT	2	8	2469078	2469085	25 %	50 %	25 %	0 %	Non-Coding
53526	NC_015873	CAT	2	6	2469092	2469097	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53527	NC_015873	GCC	2	6	2469109	2469114	0 %	0 %	33.33 %	66.67 %	Non-Coding
53528	NC_015873	T	6	6	2469153	2469158	0 %	100 %	0 %	0 %	Non-Coding
53529	NC_015873	TGT	2	6	2469184	2469189	0 %	66.67 %	33.33 %	0 %	Non-Coding
53530	NC_015873	CGG	2	6	2469206	2469211	0 %	0 %	66.67 %	33.33 %	Non-Coding
53531	NC_015873	CGC	2	6	2469214	2469219	0 %	0 %	33.33 %	66.67 %	Non-Coding
53532	NC_015873	CAT	2	6	2469281	2469286	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53533	NC_015873	GCC	2	6	2469319	2469324	0 %	0 %	33.33 %	66.67 %	Non-Coding
53534	NC_015873	AAC	2	6	2469365	2469370	66.67 %	0 %	0 %	33.33 %	Non-Coding
53535	NC_015873	A	7	7	2469371	2469377	100 %	0 %	0 %	0 %	Non-Coding
53536	NC_015873	CGT	2	6	2469386	2469391	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53537	NC_015873	TCTG	2	8	2469421	2469428	0 %	50 %	25 %	25 %	Non-Coding
53538	NC_015873	CAT	2	6	2469443	2469448	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53539	NC_015873	AAC	2	6	2469592	2469597	66.67 %	0 %	0 %	33.33 %	Non-Coding
53540	NC_015873	AAC	2	6	2469599	2469604	66.67 %	0 %	0 %	33.33 %	Non-Coding
53541	NC_015873	A	6	6	2469605	2469610	100 %	0 %	0 %	0 %	Non-Coding
53542	NC_015873	T	6	6	2469631	2469636	0 %	100 %	0 %	0 %	Non-Coding
53543	NC_015873	TCC	2	6	2469658	2469663	0 %	33.33 %	0 %	66.67 %	Non-Coding
53544	NC_015873	C	6	6	2469674	2469679	0 %	0 %	0 %	100 %	Non-Coding
53545	NC_015873	CTG	2	6	2469707	2469712	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53546	NC_015873	CT	3	6	2469818	2469823	0 %	50 %	0 %	50 %	Non-Coding
53547	NC_015873	TCG	2	6	2469837	2469842	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53548	NC_015873	CGT	2	6	2469915	2469920	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53549	NC_015873	AAGTC	2	10	2469952	2469961	40 %	20 %	20 %	20 %	Non-Coding
53550	NC_015873	GGTC	2	8	2470169	2470176	0 %	25 %	50 %	25 %	Non-Coding
53551	NC_015873	AGC	2	6	2470200	2470205	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53552	NC_015873	ACG	2	6	2470254	2470259	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53553	NC_015873	TGA	2	6	2470334	2470339	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53554	NC_015873	GA	3	6	2470385	2470390	50 %	0 %	50 %	0 %	Non-Coding
53555	NC_015873	CT	3	6	2470443	2470448	0 %	50 %	0 %	50 %	Non-Coding
53556	NC_015873	ACC	2	6	2470449	2470454	33.33 %	0 %	0 %	66.67 %	Non-Coding
53557	NC_015873	CG	3	6	2470532	2470537	0 %	0 %	50 %	50 %	Non-Coding
53558	NC_015873	TCCG	2	8	2470541	2470548	0 %	25 %	25 %	50 %	Non-Coding
53559	NC_015873	CCA	2	6	2470679	2470684	33.33 %	0 %	0 %	66.67 %	Non-Coding
53560	NC_015873	GCC	2	6	2470940	2470945	0 %	0 %	33.33 %	66.67 %	Non-Coding
53561	NC_015873	CT	3	6	2471085	2471090	0 %	50 %	0 %	50 %	Non-Coding
53562	NC_015873	AT	3	6	2471164	2471169	50 %	50 %	0 %	0 %	Non-Coding
53563	NC_015873	ACCT	2	8	2471368	2471375	25 %	25 %	0 %	50 %	Non-Coding
53564	NC_015873	CG	3	6	2471401	2471406	0 %	0 %	50 %	50 %	Non-Coding
53565	NC_015873	CCTT	2	8	2471407	2471414	0 %	50 %	0 %	50 %	Non-Coding
53566	NC_015873	TGT	2	6	2471467	2471472	0 %	66.67 %	33.33 %	0 %	Non-Coding
53567	NC_015873	GAC	2	6	2471521	2471526	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53568	NC_015873	CTT	2	6	2471575	2471580	0 %	66.67 %	0 %	33.33 %	Non-Coding
53569	NC_015873	TC	3	6	2471601	2471606	0 %	50 %	0 %	50 %	Non-Coding
53570	NC_015873	CCTG	2	8	2471609	2471616	0 %	25 %	25 %	50 %	Non-Coding
53571	NC_015873	TC	3	6	2471736	2471741	0 %	50 %	0 %	50 %	Non-Coding
53572	NC_015873	TGG	2	6	2471771	2471776	0 %	33.33 %	66.67 %	0 %	Non-Coding
53573	NC_015873	GTT	2	6	2471799	2471804	0 %	66.67 %	33.33 %	0 %	Non-Coding
53574	NC_015873	TTA	2	6	2471891	2471896	33.33 %	66.67 %	0 %	0 %	Non-Coding
53575	NC_015873	TCC	2	6	2472117	2472122	0 %	33.33 %	0 %	66.67 %	Non-Coding
53576	NC_015873	AACT	2	8	2472186	2472193	50 %	25 %	0 %	25 %	Non-Coding
53577	NC_015873	TCGCTT	2	12	2472211	2472222	0 %	50 %	16.67 %	33.33 %	Non-Coding
53578	NC_015873	TTC	2	6	2472275	2472280	0 %	66.67 %	0 %	33.33 %	Non-Coding
53579	NC_015873	C	6	6	2472435	2472440	0 %	0 %	0 %	100 %	Non-Coding
53580	NC_015873	CT	4	8	2472520	2472527	0 %	50 %	0 %	50 %	Non-Coding
53581	NC_015873	TCGC	2	8	2472624	2472631	0 %	25 %	25 %	50 %	Non-Coding
53582	NC_015873	CTA	2	6	2472634	2472639	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53583	NC_015873	TCC	2	6	2472663	2472668	0 %	33.33 %	0 %	66.67 %	Non-Coding
53584	NC_015873	ACT	2	6	2472723	2472728	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53585	NC_015873	CTT	2	6	2472810	2472815	0 %	66.67 %	0 %	33.33 %	Non-Coding
53586	NC_015873	CCG	2	6	2472837	2472842	0 %	0 %	33.33 %	66.67 %	Non-Coding
53587	NC_015873	CTTA	2	8	2472849	2472856	25 %	50 %	0 %	25 %	Non-Coding
53588	NC_015873	AATG	2	8	2472982	2472989	50 %	25 %	25 %	0 %	Non-Coding
53589	NC_015873	CTT	2	6	2473007	2473012	0 %	66.67 %	0 %	33.33 %	Non-Coding
53590	NC_015873	AGG	2	6	2473028	2473033	33.33 %	0 %	66.67 %	0 %	Non-Coding
53591	NC_015873	ATC	2	6	2473084	2473089	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53592	NC_015873	GGCT	2	8	2473105	2473112	0 %	25 %	50 %	25 %	Non-Coding
53593	NC_015873	GTG	2	6	2473154	2473159	0 %	33.33 %	66.67 %	0 %	Non-Coding
53594	NC_015873	GT	3	6	2473169	2473174	0 %	50 %	50 %	0 %	Non-Coding
53595	NC_015873	GTA	2	6	2473332	2473337	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53596	NC_015873	GT	3	6	2473339	2473344	0 %	50 %	50 %	0 %	Non-Coding
53597	NC_015873	ATG	2	6	2473364	2473369	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53598	NC_015873	TCC	2	6	2473390	2473395	0 %	33.33 %	0 %	66.67 %	Non-Coding
53599	NC_015873	TC	3	6	2473412	2473417	0 %	50 %	0 %	50 %	Non-Coding
53600	NC_015873	AGA	2	6	2473446	2473451	66.67 %	0 %	33.33 %	0 %	Non-Coding
53601	NC_015873	CACGA	2	10	2473490	2473499	40 %	0 %	20 %	40 %	Non-Coding
53602	NC_015873	GAC	2	6	2473503	2473508	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53603	NC_015873	CAC	2	6	2473516	2473521	33.33 %	0 %	0 %	66.67 %	Non-Coding
53604	NC_015873	TCC	2	6	2473533	2473538	0 %	33.33 %	0 %	66.67 %	Non-Coding
53605	NC_015873	CAAT	2	8	2473568	2473575	50 %	25 %	0 %	25 %	Non-Coding
53606	NC_015873	TTC	2	6	2473593	2473598	0 %	66.67 %	0 %	33.33 %	Non-Coding
53607	NC_015873	CCT	2	6	2473733	2473738	0 %	33.33 %	0 %	66.67 %	Non-Coding
53608	NC_015873	GTC	2	6	2473825	2473830	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53609	NC_015873	TCC	2	6	2473857	2473862	0 %	33.33 %	0 %	66.67 %	Non-Coding
53610	NC_015873	ACG	2	6	2473977	2473982	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53611	NC_015873	GC	3	6	2473989	2473994	0 %	0 %	50 %	50 %	Non-Coding
53612	NC_015873	AAT	2	6	2474006	2474011	66.67 %	33.33 %	0 %	0 %	Non-Coding
53613	NC_015873	GCT	2	6	2474046	2474051	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53614	NC_015873	CTG	2	6	2474215	2474220	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53615	NC_015873	TCG	2	6	2474290	2474295	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53616	NC_015873	TGG	2	6	2474299	2474304	0 %	33.33 %	66.67 %	0 %	Non-Coding
53617	NC_015873	CCT	2	6	2474342	2474347	0 %	33.33 %	0 %	66.67 %	Non-Coding
53618	NC_015873	TTC	2	6	2474375	2474380	0 %	66.67 %	0 %	33.33 %	Non-Coding
53619	NC_015873	AGC	2	6	2474417	2474422	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53620	NC_015873	TGT	2	6	2474433	2474438	0 %	66.67 %	33.33 %	0 %	Non-Coding
53621	NC_015873	AAG	2	6	2474497	2474502	66.67 %	0 %	33.33 %	0 %	Non-Coding
53622	NC_015873	TCT	2	6	2474516	2474521	0 %	66.67 %	0 %	33.33 %	Non-Coding
53623	NC_015873	CGC	2	6	2474546	2474551	0 %	0 %	33.33 %	66.67 %	Non-Coding
53624	NC_015873	AT	3	6	2474588	2474593	50 %	50 %	0 %	0 %	Non-Coding
53625	NC_015873	ATTG	2	8	2474618	2474625	25 %	50 %	25 %	0 %	Non-Coding
53626	NC_015873	TTCA	2	8	2474677	2474684	25 %	50 %	0 %	25 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.