MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Listeria monocytogenes strain J1926 plasmid

Total Repeats: 126

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022051	CAG	2	6	22	27	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_022051	TAA	3	9	82	90	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_022051	CAA	2	6	175	180	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_022051	ATG	2	6	197	202	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_022051	TCC	2	6	715	720	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_022051	GAT	2	6	1713	1718	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_022051	ATC	2	6	1799	1804	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_022051	CTA	2	6	1809	1814	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_022051	TAG	2	6	1830	1835	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_022051	AAC	2	6	1875	1880	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_022051	GTT	2	6	1957	1962	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_022051	TGT	2	6	1992	1997	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_022051	AGA	2	6	2127	2132	66.67 %	0 %	33.33 %	0 %	Non-Coding
14	NC_022051	CAA	2	6	3639	3644	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_022051	AAG	2	6	3796	3801	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_022051	TTC	2	6	4532	4537	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_022051	AAT	2	6	4550	4555	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_022051	GAT	2	6	5096	5101	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_022051	TAT	2	6	5548	5553	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_022051	TAA	2	6	5589	5594	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_022051	AAG	2	6	5677	5682	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_022051	CTT	2	6	5701	5706	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_022051	TGT	2	6	5712	5717	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_022051	TAT	2	6	8230	8235	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_022051	CTT	2	6	8303	8308	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_022051	TAA	2	6	8337	8342	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_022051	ATA	2	6	8379	8384	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_022051	TAA	2	6	8390	8395	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_022051	AAT	2	6	9194	9199	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_022051	AGG	2	6	9211	9216	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_022051	CTA	2	6	12027	12032	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_022051	CAT	2	6	12098	12103	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_022051	TTC	2	6	13306	13311	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_022051	CTT	2	6	14778	14783	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_022051	GGC	2	6	15883	15888	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_022051	CTT	2	6	15892	15897	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_022051	AAT	2	6	17470	17475	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_022051	GAA	2	6	17516	17521	66.67 %	0 %	33.33 %	0 %	Non-Coding
39	NC_022051	TTG	2	6	17644	17649	0 %	66.67 %	33.33 %	0 %	Non-Coding
40	NC_022051	GAG	2	6	17650	17655	33.33 %	0 %	66.67 %	0 %	Non-Coding
41	NC_022051	CCT	2	6	20584	20589	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_022051	TAA	2	6	20602	20607	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_022051	ATA	2	6	20647	20652	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_022051	ATT	2	6	20709	20714	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_022051	GTA	2	6	20716	20721	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NC_022051	ACC	2	6	23218	23223	33.33 %	0 %	0 %	66.67 %	Non-Coding
47	NC_022051	GAA	2	6	26463	26468	66.67 %	0 %	33.33 %	0 %	Non-Coding
48	NC_022051	TTA	2	6	26675	26680	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_022051	ACC	2	6	28205	28210	33.33 %	0 %	0 %	66.67 %	Non-Coding
50	NC_022051	ACC	2	6	28239	28244	33.33 %	0 %	0 %	66.67 %	Non-Coding
51	NC_022051	ACC	2	6	28274	28279	33.33 %	0 %	0 %	66.67 %	Non-Coding
52	NC_022051	ATT	2	6	28425	28430	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_022051	TTC	2	6	28491	28496	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_022051	AGG	2	6	30960	30965	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_022051	GAG	2	6	31757	31762	33.33 %	0 %	66.67 %	0 %	Non-Coding
56	NC_022051	AAT	2	6	31774	31779	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_022051	TAT	2	6	32872	32877	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_022051	TAC	2	6	34944	34949	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_022051	TCC	2	6	41254	41259	0 %	33.33 %	0 %	66.67 %	Non-Coding
60	NC_022051	ACC	2	6	41291	41296	33.33 %	0 %	0 %	66.67 %	Non-Coding
61	NC_022051	TCA	2	6	41316	41321	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_022051	TAA	2	6	41438	41443	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_022051	TAT	2	6	41517	41522	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_022051	ATT	2	6	41552	41557	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_022051	ATA	2	6	41720	41725	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_022051	ACT	2	6	41788	41793	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
67	NC_022051	GTA	2	6	41841	41846	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_022051	ATA	2	6	41906	41911	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_022051	CTT	2	6	41991	41996	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_022051	AGT	2	6	42049	42054	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_022051	ATT	2	6	42277	42282	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_022051	GAA	2	6	42295	42300	66.67 %	0 %	33.33 %	0 %	Non-Coding
73	NC_022051	GAG	2	6	42308	42313	33.33 %	0 %	66.67 %	0 %	Non-Coding
74	NC_022051	CTT	2	6	43031	43036	0 %	66.67 %	0 %	33.33 %	Non-Coding
75	NC_022051	TTA	2	6	43071	43076	33.33 %	66.67 %	0 %	0 %	Non-Coding
76	NC_022051	TAA	2	6	43084	43089	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_022051	ATA	2	6	43090	43095	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_022051	TAA	2	6	43144	43149	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_022051	ACT	2	6	43178	43183	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_022051	TTA	2	6	43228	43233	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_022051	TAA	2	6	43258	43263	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_022051	AAG	2	6	44575	44580	66.67 %	0 %	33.33 %	0 %	Non-Coding
83	NC_022051	AAG	2	6	44712	44717	66.67 %	0 %	33.33 %	0 %	Non-Coding
84	NC_022051	ATC	2	6	44721	44726	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_022051	TGC	2	6	44734	44739	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_022051	GAA	2	6	44769	44774	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_022051	TTC	2	6	46358	46363	0 %	66.67 %	0 %	33.33 %	Non-Coding
88	NC_022051	CCT	2	6	46364	46369	0 %	33.33 %	0 %	66.67 %	Non-Coding
89	NC_022051	TAT	2	6	46401	46406	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_022051	AGG	2	6	47135	47140	33.33 %	0 %	66.67 %	0 %	Non-Coding
91	NC_022051	AAG	2	6	49530	49535	66.67 %	0 %	33.33 %	0 %	Non-Coding
92	NC_022051	GAT	2	6	49536	49541	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_022051	AGG	2	6	51622	51627	33.33 %	0 %	66.67 %	0 %	Non-Coding
94	NC_022051	AGG	2	6	51857	51862	33.33 %	0 %	66.67 %	0 %	Non-Coding
95	NC_022051	TAA	2	6	52531	52536	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_022051	TGA	2	6	52541	52546	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
97	NC_022051	TCA	2	6	53460	53465	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_022051	GAT	2	6	53500	53505	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
99	NC_022051	GAC	2	6	53992	53997	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
100	NC_022051	CCA	2	6	54004	54009	33.33 %	0 %	0 %	66.67 %	Non-Coding
101	NC_022051	CCA	2	6	54076	54081	33.33 %	0 %	0 %	66.67 %	Non-Coding
102	NC_022051	ACT	2	6	54112	54117	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
103	NC_022051	TAT	2	6	54200	54205	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_022051	ACT	2	6	54263	54268	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_022051	AAT	2	6	54291	54296	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_022051	ACA	2	6	54309	54314	66.67 %	0 %	0 %	33.33 %	Non-Coding
107	NC_022051	ACA	2	6	54486	54491	66.67 %	0 %	0 %	33.33 %	Non-Coding
108	NC_022051	CAT	2	6	54595	54600	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
109	NC_022051	TGT	2	6	54654	54659	0 %	66.67 %	33.33 %	0 %	Non-Coding
110	NC_022051	ATC	2	6	54707	54712	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
111	NC_022051	AGC	2	6	54791	54796	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
112	NC_022051	ATT	2	6	54840	54845	33.33 %	66.67 %	0 %	0 %	Non-Coding
113	NC_022051	ATC	2	6	54914	54919	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
114	NC_022051	TGA	2	6	55088	55093	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
115	NC_022051	CAG	2	6	55105	55110	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
116	NC_022051	TTC	2	6	55138	55143	0 %	66.67 %	0 %	33.33 %	Non-Coding
117	NC_022051	ATA	2	6	55152	55157	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_022051	GAC	2	6	55205	55210	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
119	NC_022051	AAT	2	6	55337	55342	66.67 %	33.33 %	0 %	0 %	Non-Coding
120	NC_022051	ATC	2	6	55362	55367	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
121	NC_022051	ACA	2	6	55528	55533	66.67 %	0 %	0 %	33.33 %	Non-Coding
122	NC_022051	TTA	2	6	55581	55586	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_022051	CAA	2	6	55678	55683	66.67 %	0 %	0 %	33.33 %	Non-Coding
124	NC_022051	AAT	2	6	55739	55744	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_022051	TTC	2	6	55745	55750	0 %	66.67 %	0 %	33.33 %	Non-Coding
126	NC_022051	TAA	2	6	55762	55767	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.