MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Listeria monocytogenes strain J1817 plasmid

Total Repeats: 116

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022047	CAA	2	6	63	68	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_022047	GTT	2	6	235	240	0 %	66.67 %	33.33 %	0 %	Non-Coding
3	NC_022047	AAT	2	6	253	258	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_022047	AGG	2	6	278	283	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_022047	TTG	2	6	332	337	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_022047	GTT	2	6	463	468	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_022047	GTA	2	6	482	487	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_022047	AGG	2	6	550	555	33.33 %	0 %	66.67 %	0 %	Non-Coding
9	NC_022047	AGG	2	6	785	790	33.33 %	0 %	66.67 %	0 %	Non-Coding
10	NC_022047	TAA	2	6	1459	1464	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_022047	TGA	2	6	1469	1474	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_022047	TCA	2	6	2388	2393	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_022047	GAT	2	6	2428	2433	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_022047	GAC	2	6	2920	2925	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_022047	CCA	2	6	2932	2937	33.33 %	0 %	0 %	66.67 %	Non-Coding
16	NC_022047	CCA	2	6	3004	3009	33.33 %	0 %	0 %	66.67 %	Non-Coding
17	NC_022047	ACT	2	6	3040	3045	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_022047	TAT	2	6	3128	3133	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_022047	TCC	2	6	5446	5451	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_022047	GAT	2	6	6444	6449	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_022047	ATC	2	6	6530	6535	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_022047	CTA	2	6	6540	6545	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_022047	TAG	2	6	6561	6566	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_022047	AAC	2	6	6606	6611	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_022047	GTT	2	6	6688	6693	0 %	66.67 %	33.33 %	0 %	Non-Coding
26	NC_022047	TGT	2	6	6723	6728	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_022047	AGA	2	6	6858	6863	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NC_022047	CAA	2	6	8370	8375	66.67 %	0 %	0 %	33.33 %	Non-Coding
29	NC_022047	AAG	2	6	8527	8532	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_022047	TTC	2	6	9263	9268	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_022047	AAT	2	6	9281	9286	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_022047	GAT	2	6	9827	9832	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
33	NC_022047	TAT	2	6	10279	10284	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_022047	TAA	2	6	10320	10325	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_022047	AAG	2	6	10408	10413	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_022047	CTT	2	6	10432	10437	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_022047	TGT	2	6	10443	10448	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_022047	TAT	2	6	12961	12966	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_022047	CTT	2	6	13034	13039	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_022047	TAA	2	6	13068	13073	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_022047	ATA	2	6	13110	13115	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_022047	TAA	2	6	13121	13126	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_022047	AAT	2	6	13925	13930	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_022047	AGG	2	6	13942	13947	33.33 %	0 %	66.67 %	0 %	Non-Coding
45	NC_022047	CTA	2	6	16758	16763	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_022047	CAT	2	6	16829	16834	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_022047	TTC	2	6	18037	18042	0 %	66.67 %	0 %	33.33 %	Non-Coding
48	NC_022047	CTT	2	6	19509	19514	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_022047	GGC	2	6	20614	20619	0 %	0 %	66.67 %	33.33 %	Non-Coding
50	NC_022047	CTT	2	6	20623	20628	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_022047	AAT	2	6	22201	22206	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_022047	GAA	2	6	22247	22252	66.67 %	0 %	33.33 %	0 %	Non-Coding
53	NC_022047	TTG	2	6	22375	22380	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_022047	GAG	2	6	22381	22386	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_022047	CCT	2	6	25315	25320	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_022047	TAA	2	6	25333	25338	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_022047	ATA	2	6	25378	25383	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_022047	ATT	2	6	25440	25445	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_022047	GTA	2	6	25447	25452	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_022047	ACC	2	6	27949	27954	33.33 %	0 %	0 %	66.67 %	Non-Coding
61	NC_022047	GAA	2	6	31194	31199	66.67 %	0 %	33.33 %	0 %	Non-Coding
62	NC_022047	TTA	2	6	31406	31411	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_022047	ACC	2	6	32936	32941	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_022047	ACC	2	6	32970	32975	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_022047	ACC	2	6	33005	33010	33.33 %	0 %	0 %	66.67 %	Non-Coding
66	NC_022047	ATT	2	6	33156	33161	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_022047	TTC	2	6	33222	33227	0 %	66.67 %	0 %	33.33 %	Non-Coding
68	NC_022047	AGG	2	6	35691	35696	33.33 %	0 %	66.67 %	0 %	Non-Coding
69	NC_022047	GAG	2	6	36488	36493	33.33 %	0 %	66.67 %	0 %	Non-Coding
70	NC_022047	AAT	2	6	36505	36510	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_022047	TAT	2	6	37604	37609	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_022047	TAC	2	6	39676	39681	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_022047	TCC	2	6	45986	45991	0 %	33.33 %	0 %	66.67 %	Non-Coding
74	NC_022047	ACC	2	6	46023	46028	33.33 %	0 %	0 %	66.67 %	Non-Coding
75	NC_022047	TCA	2	6	46048	46053	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_022047	TAA	2	6	46170	46175	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_022047	TAT	2	6	46249	46254	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_022047	ATT	2	6	46284	46289	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_022047	ATA	2	6	46452	46457	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_022047	ACT	2	6	46520	46525	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
81	NC_022047	GTA	2	6	46573	46578	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
82	NC_022047	ATA	2	6	46638	46643	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_022047	CTT	2	6	46723	46728	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_022047	AGT	2	6	46781	46786	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_022047	ATT	2	6	47009	47014	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_022047	GAA	2	6	47027	47032	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_022047	GAG	2	6	47040	47045	33.33 %	0 %	66.67 %	0 %	Non-Coding
88	NC_022047	CTT	2	6	47763	47768	0 %	66.67 %	0 %	33.33 %	Non-Coding
89	NC_022047	TTA	2	6	47803	47808	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_022047	TAA	2	6	47816	47821	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_022047	ATA	2	6	47822	47827	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_022047	TAA	2	6	47876	47881	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_022047	ACT	2	6	47910	47915	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_022047	TTA	2	6	47960	47965	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_022047	TAA	2	6	47990	47995	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_022047	AAG	2	6	49307	49312	66.67 %	0 %	33.33 %	0 %	Non-Coding
97	NC_022047	AAG	2	6	49444	49449	66.67 %	0 %	33.33 %	0 %	Non-Coding
98	NC_022047	ATC	2	6	49453	49458	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_022047	TGC	2	6	49466	49471	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
100	NC_022047	GAA	2	6	49501	49506	66.67 %	0 %	33.33 %	0 %	Non-Coding
101	NC_022047	TTC	2	6	51090	51095	0 %	66.67 %	0 %	33.33 %	Non-Coding
102	NC_022047	CCT	2	6	51096	51101	0 %	33.33 %	0 %	66.67 %	Non-Coding
103	NC_022047	TAT	2	6	51133	51138	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_022047	AGG	2	6	51867	51872	33.33 %	0 %	66.67 %	0 %	Non-Coding
105	NC_022047	AAG	2	6	54262	54267	66.67 %	0 %	33.33 %	0 %	Non-Coding
106	NC_022047	GAT	2	6	54268	54273	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
107	NC_022047	TAA	2	6	55017	55022	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_022047	AAG	2	6	55092	55097	66.67 %	0 %	33.33 %	0 %	Non-Coding
109	NC_022047	TTG	2	6	55100	55105	0 %	66.67 %	33.33 %	0 %	Non-Coding
110	NC_022047	GAA	2	6	55166	55171	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_022047	GCA	2	6	55175	55180	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
112	NC_022047	AAT	2	6	55202	55207	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_022047	AGA	2	6	55222	55227	66.67 %	0 %	33.33 %	0 %	Non-Coding
114	NC_022047	TAT	2	6	55403	55408	33.33 %	66.67 %	0 %	0 %	Non-Coding
115	NC_022047	CTT	2	6	55493	55498	0 %	66.67 %	0 %	33.33 %	Non-Coding
116	NC_022047	ATT	2	6	55622	55627	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.