MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Listeria monocytogenes strain J1776 plasmid

Total Repeats: 102

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022046	TAA	3	9	18	26	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_022046	CAA	2	6	111	116	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_022046	ATG	2	6	133	138	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_022046	TCC	2	6	651	656	0 %	33.33 %	0 %	66.67 %	Non-Coding
5	NC_022046	GAT	2	6	1649	1654	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_022046	ATC	2	6	1735	1740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_022046	CTA	2	6	1745	1750	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_022046	TAG	2	6	1766	1771	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_022046	AAC	2	6	1811	1816	66.67 %	0 %	0 %	33.33 %	Non-Coding
10	NC_022046	GTT	2	6	1893	1898	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_022046	TGT	2	6	1928	1933	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_022046	AGA	2	6	2063	2068	66.67 %	0 %	33.33 %	0 %	Non-Coding
13	NC_022046	CAA	2	6	3575	3580	66.67 %	0 %	0 %	33.33 %	Non-Coding
14	NC_022046	AAG	2	6	3732	3737	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_022046	TTC	2	6	4468	4473	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_022046	AAT	2	6	4486	4491	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_022046	GAT	2	6	5032	5037	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18	NC_022046	TAT	2	6	5484	5489	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_022046	TAA	2	6	5525	5530	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_022046	AAG	2	6	5613	5618	66.67 %	0 %	33.33 %	0 %	Non-Coding
21	NC_022046	CTT	2	6	5637	5642	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_022046	TGT	2	6	5648	5653	0 %	66.67 %	33.33 %	0 %	Non-Coding
23	NC_022046	TAT	2	6	8166	8171	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_022046	CTT	2	6	8239	8244	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_022046	TAA	2	6	8273	8278	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_022046	ATA	2	6	8315	8320	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_022046	TAA	2	6	8326	8331	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_022046	AAT	2	6	9130	9135	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_022046	AGG	2	6	9147	9152	33.33 %	0 %	66.67 %	0 %	Non-Coding
30	NC_022046	CTA	2	6	11963	11968	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_022046	CAT	2	6	12034	12039	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_022046	TTC	2	6	13242	13247	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_022046	CTT	2	6	14714	14719	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_022046	GGC	2	6	15819	15824	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_022046	CTT	2	6	15828	15833	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_022046	AAT	2	6	17406	17411	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_022046	GAA	2	6	17452	17457	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_022046	TTG	2	6	17580	17585	0 %	66.67 %	33.33 %	0 %	Non-Coding
39	NC_022046	GAG	2	6	17586	17591	33.33 %	0 %	66.67 %	0 %	Non-Coding
40	NC_022046	CCT	2	6	20520	20525	0 %	33.33 %	0 %	66.67 %	Non-Coding
41	NC_022046	TAA	2	6	20538	20543	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_022046	ATA	2	6	20583	20588	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_022046	ATT	2	6	20645	20650	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_022046	GTA	2	6	20652	20657	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_022046	ACC	2	6	23154	23159	33.33 %	0 %	0 %	66.67 %	Non-Coding
46	NC_022046	GAA	2	6	26399	26404	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_022046	TTA	2	6	26611	26616	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_022046	ACC	2	6	28141	28146	33.33 %	0 %	0 %	66.67 %	Non-Coding
49	NC_022046	ACC	2	6	28175	28180	33.33 %	0 %	0 %	66.67 %	Non-Coding
50	NC_022046	ACC	2	6	28210	28215	33.33 %	0 %	0 %	66.67 %	Non-Coding
51	NC_022046	ATT	2	6	28361	28366	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_022046	TTC	2	6	28427	28432	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_022046	AGG	2	6	30896	30901	33.33 %	0 %	66.67 %	0 %	Non-Coding
54	NC_022046	GAG	2	6	31693	31698	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_022046	AAT	2	6	31710	31715	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_022046	TAT	2	6	32809	32814	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_022046	TAC	2	6	34881	34886	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_022046	TCC	2	6	41191	41196	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_022046	ACC	2	6	41228	41233	33.33 %	0 %	0 %	66.67 %	Non-Coding
60	NC_022046	TCA	2	6	41253	41258	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_022046	TAA	2	6	41375	41380	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_022046	TAT	2	6	41454	41459	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_022046	ATT	2	6	41489	41494	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_022046	ATA	2	6	41657	41662	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_022046	ACT	2	6	41725	41730	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_022046	GTA	2	6	41778	41783	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_022046	ATA	2	6	41843	41848	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_022046	CTT	2	6	41928	41933	0 %	66.67 %	0 %	33.33 %	Non-Coding
69	NC_022046	AGT	2	6	41986	41991	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
70	NC_022046	ATT	2	6	42214	42219	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_022046	GAA	2	6	42232	42237	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_022046	GAG	2	6	42245	42250	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_022046	CTT	2	6	42968	42973	0 %	66.67 %	0 %	33.33 %	Non-Coding
74	NC_022046	TTA	2	6	43008	43013	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_022046	TAA	2	6	43021	43026	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_022046	ATA	2	6	43027	43032	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_022046	TAA	2	6	43081	43086	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_022046	ACT	2	6	43115	43120	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
79	NC_022046	TTA	2	6	43165	43170	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_022046	TAA	2	6	43195	43200	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_022046	AAG	2	6	44512	44517	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_022046	AAG	2	6	44649	44654	66.67 %	0 %	33.33 %	0 %	Non-Coding
83	NC_022046	ATC	2	6	44658	44663	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_022046	TGC	2	6	44671	44676	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_022046	GAA	2	6	44706	44711	66.67 %	0 %	33.33 %	0 %	Non-Coding
86	NC_022046	TTC	2	6	46295	46300	0 %	66.67 %	0 %	33.33 %	Non-Coding
87	NC_022046	CCT	2	6	46301	46306	0 %	33.33 %	0 %	66.67 %	Non-Coding
88	NC_022046	TAT	2	6	46338	46343	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_022046	AGG	2	6	47072	47077	33.33 %	0 %	66.67 %	0 %	Non-Coding
90	NC_022046	AAG	2	6	49467	49472	66.67 %	0 %	33.33 %	0 %	Non-Coding
91	NC_022046	GAT	2	6	49473	49478	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_022046	AGG	2	6	51559	51564	33.33 %	0 %	66.67 %	0 %	Non-Coding
93	NC_022046	AGG	2	6	51794	51799	33.33 %	0 %	66.67 %	0 %	Non-Coding
94	NC_022046	TAA	2	6	52468	52473	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_022046	TGA	2	6	52478	52483	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
96	NC_022046	TCA	2	6	53397	53402	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_022046	GAT	2	6	53437	53442	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
98	NC_022046	GAC	2	6	53929	53934	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
99	NC_022046	CCA	2	6	53941	53946	33.33 %	0 %	0 %	66.67 %	Non-Coding
100	NC_022046	CCA	2	6	54013	54018	33.33 %	0 %	0 %	66.67 %	Non-Coding
101	NC_022046	ACT	2	6	54049	54054	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
102	NC_022046	TAT	2	6	54137	54142	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.