MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Listeria monocytogenes strain R2-502 plasmid

Total Repeats: 112

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021828	GCA	2	6	18	23	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_021828	TTC	2	6	112	117	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_021828	ATC	2	6	124	129	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_021828	CTT	2	6	246	251	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_021828	CTA	2	6	252	257	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_021828	TCA	2	6	449	454	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_021828	CAT	2	6	516	521	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_021828	TTC	2	6	522	527	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_021828	ATT	2	6	628	633	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_021828	TGT	2	6	686	691	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_021828	TAT	2	6	705	710	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_021828	TAG	2	6	745	750	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_021828	GAT	2	6	787	792	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_021828	AGC	2	6	1154	1159	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_021828	TCA	2	6	1163	1168	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_021828	CTG	2	6	1187	1192	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_021828	ATA	2	6	1760	1765	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_021828	ATT	2	6	2859	2864	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_021828	CTC	2	6	2876	2881	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_021828	CCT	2	6	3673	3678	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_021828	GAA	2	6	6151	6156	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_021828	AAT	2	6	6217	6222	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_021828	GGT	2	6	6368	6373	0 %	33.33 %	66.67 %	0 %	Non-Coding
24	NC_021828	GGT	2	6	6403	6408	0 %	33.33 %	66.67 %	0 %	Non-Coding
25	NC_021828	GGT	2	6	6436	6441	0 %	33.33 %	66.67 %	0 %	Non-Coding
26	NC_021828	GGT	2	6	6470	6475	0 %	33.33 %	66.67 %	0 %	Non-Coding
27	NC_021828	TAA	2	6	7998	8003	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_021828	TAT	2	6	8065	8070	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_021828	TTC	2	6	8210	8215	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_021828	TGG	2	6	11801	11806	0 %	33.33 %	66.67 %	0 %	Non-Coding
31	NC_021828	TAC	2	6	14304	14309	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_021828	TTA	2	6	14372	14377	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_021828	TTA	2	6	14418	14423	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_021828	AGG	2	6	14436	14441	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_021828	CCT	2	6	17369	17374	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_021828	CAA	2	6	17376	17381	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_021828	AAT	2	6	17466	17471	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_021828	TTA	2	6	17489	17494	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_021828	TCA	2	6	18331	18336	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_021828	AAC	2	6	19862	19867	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_021828	CTT	2	6	19923	19928	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_021828	ACA	2	6	22208	22213	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_021828	ATA	2	6	22249	22254	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_021828	AAT	2	6	22329	22334	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_021828	GTG	2	6	22489	22494	0 %	33.33 %	66.67 %	0 %	Non-Coding
46	NC_021828	AAG	2	6	22554	22559	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_021828	ATT	2	6	22874	22879	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_021828	GAA	2	6	23005	23010	66.67 %	0 %	33.33 %	0 %	Non-Coding
49	NC_021828	GAA	2	6	23017	23022	66.67 %	0 %	33.33 %	0 %	Non-Coding
50	NC_021828	AAC	2	6	23071	23076	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_021828	AAT	2	6	23171	23176	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_021828	TTA	2	6	24206	24211	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_021828	CCT	2	6	26871	26876	0 %	33.33 %	0 %	66.67 %	Non-Coding
54	NC_021828	CTT	2	6	26997	27002	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_021828	ATT	2	6	27063	27068	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_021828	ATA	3	9	27141	27149	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_021828	CAC	2	6	27198	27203	33.33 %	0 %	0 %	66.67 %	Non-Coding
58	NC_021828	ATA	2	6	27298	27303	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_021828	TAA	3	9	28586	28594	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_021828	AAT	2	6	28599	28604	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_021828	ATC	2	6	29329	29334	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_021828	TCC	2	6	30730	30735	0 %	33.33 %	0 %	66.67 %	Non-Coding
63	NC_021828	CAT	2	6	30774	30779	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_021828	AAC	2	6	30781	30786	66.67 %	0 %	0 %	33.33 %	Non-Coding
65	NC_021828	TTA	2	6	30819	30824	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_021828	TAA	2	6	31159	31164	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_021828	TGG	3	9	31183	31191	0 %	33.33 %	66.67 %	0 %	Non-Coding
68	NC_021828	AGT	2	6	31322	31327	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_021828	TTC	2	6	31498	31503	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_021828	TCC	2	6	32904	32909	0 %	33.33 %	0 %	66.67 %	Non-Coding
71	NC_021828	TAA	2	6	33311	33316	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_021828	AGG	2	6	33326	33331	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_021828	CTC	2	6	33976	33981	0 %	33.33 %	0 %	66.67 %	Non-Coding
74	NC_021828	AAT	2	6	34075	34080	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_021828	TAT	2	6	36711	36716	33.33 %	66.67 %	0 %	0 %	Non-Coding
76	NC_021828	ATT	2	6	36832	36837	33.33 %	66.67 %	0 %	0 %	Non-Coding
77	NC_021828	AGG	2	6	36872	36877	33.33 %	0 %	66.67 %	0 %	Non-Coding
78	NC_021828	CCT	2	6	43644	43649	0 %	33.33 %	0 %	66.67 %	Non-Coding
79	NC_021828	TAA	2	6	43672	43677	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_021828	TTA	2	6	44481	44486	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_021828	TAA	2	6	44692	44697	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_021828	GTT	2	6	44725	44730	0 %	66.67 %	33.33 %	0 %	Non-Coding
83	NC_021828	TTA	2	6	47790	47795	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_021828	CAA	2	6	47827	47832	66.67 %	0 %	0 %	33.33 %	Non-Coding
85	NC_021828	CAT	2	6	47860	47865	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
86	NC_021828	ATT	2	6	47897	47902	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_021828	TTA	2	6	47946	47951	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_021828	ACT	2	6	48149	48154	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_021828	ATT	2	6	48268	48273	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_021828	TAC	2	6	48286	48291	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_021828	CCT	2	6	50984	50989	0 %	33.33 %	0 %	66.67 %	Non-Coding
92	NC_021828	CTG	2	6	51076	51081	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
93	NC_021828	AAT	2	6	51087	51092	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_021828	GTC	2	6	51190	51195	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_021828	ATA	2	6	51227	51232	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_021828	AAT	2	6	52218	52223	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_021828	ATT	2	6	52250	52255	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_021828	ATT	2	6	52263	52268	33.33 %	66.67 %	0 %	0 %	Non-Coding
99	NC_021828	ATT	2	6	52276	52281	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_021828	ATC	2	6	52675	52680	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
101	NC_021828	ACC	2	6	52697	52702	33.33 %	0 %	0 %	66.67 %	Non-Coding
102	NC_021828	ATA	2	6	54014	54019	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_021828	GAA	2	6	54020	54025	66.67 %	0 %	33.33 %	0 %	Non-Coding
104	NC_021828	CTT	2	6	55554	55559	0 %	66.67 %	0 %	33.33 %	Non-Coding
105	NC_021828	AAT	2	6	55649	55654	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_021828	AGG	2	6	55668	55673	33.33 %	0 %	66.67 %	0 %	Non-Coding
107	NC_021828	AGG	2	6	56097	56102	33.33 %	0 %	66.67 %	0 %	Non-Coding
108	NC_021828	TGC	2	6	57404	57409	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
109	NC_021828	TTC	2	6	57416	57421	0 %	66.67 %	0 %	33.33 %	Non-Coding
110	NC_021828	TCA	2	6	57478	57483	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
111	NC_021828	ACC	2	6	57498	57503	33.33 %	0 %	0 %	66.67 %	Non-Coding
112	NC_021828	TTC	2	6	57534	57539	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.