MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus reuteri I5007 plasmid pLRI03

Total Repeats: 47

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021496	AGG	2	6	224	229	33.33 %	0 %	66.67 %	0 %	Non-Coding
2	NC_021496	GAA	2	6	816	821	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_021496	TCC	2	6	840	845	0 %	33.33 %	0 %	66.67 %	Non-Coding
4	NC_021496	ATA	2	6	969	974	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_021496	AGT	2	6	1125	1130	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_021496	ATA	2	6	1195	1200	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_021496	ATT	2	6	1736	1741	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_021496	GAA	2	6	1783	1788	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NC_021496	AGC	2	6	1843	1848	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_021496	ATT	2	6	1853	1858	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_021496	TCC	2	6	2354	2359	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_021496	CTA	3	9	4452	4460	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_021496	TTA	2	6	4468	4473	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_021496	AAC	2	6	4519	4524	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_021496	TCC	2	6	7247	7252	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_021496	CCT	2	6	10956	10961	0 %	33.33 %	0 %	66.67 %	Non-Coding
17	NC_021496	ACA	2	6	11013	11018	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_021496	TAT	2	6	11610	11615	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_021496	ATT	2	6	11677	11682	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_021496	ACC	2	6	11724	11729	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_021496	AAT	2	6	11733	11738	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_021496	ATT	2	6	13261	13266	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_021496	TGA	2	6	13282	13287	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_021496	ATA	2	6	13353	13358	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_021496	TAA	2	6	13398	13403	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_021496	GGA	2	6	13405	13410	33.33 %	0 %	66.67 %	0 %	Non-Coding
27	NC_021496	TCT	2	6	14573	14578	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_021496	TTA	2	6	14708	14713	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_021496	TAT	2	6	14859	14864	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_021496	CAA	2	6	15080	15085	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_021496	TCC	2	6	18807	18812	0 %	33.33 %	0 %	66.67 %	Non-Coding
32	NC_021496	ATC	2	6	30688	30693	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_021496	GCG	2	6	30750	30755	0 %	0 %	66.67 %	33.33 %	Non-Coding
34	NC_021496	AAT	2	6	30764	30769	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_021496	GTA	2	6	30833	30838	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
36	NC_021496	CTT	2	6	30941	30946	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_021496	CAA	2	6	31326	31331	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_021496	ATT	2	6	31388	31393	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_021496	CTT	2	6	32051	32056	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_021496	CCT	2	6	36684	36689	0 %	33.33 %	0 %	66.67 %	Non-Coding
41	NC_021496	AAG	2	6	36779	36784	66.67 %	0 %	33.33 %	0 %	Non-Coding
42	NC_021496	GCT	2	6	36809	36814	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_021496	CCT	2	6	39191	39196	0 %	33.33 %	0 %	66.67 %	Non-Coding
44	NC_021496	ATC	2	6	39333	39338	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_021496	CAC	2	6	39935	39940	33.33 %	0 %	0 %	66.67 %	Non-Coding
46	NC_021496	ACC	2	6	39941	39946	33.33 %	0 %	0 %	66.67 %	Non-Coding
47	NC_021496	TAT	2	6	40006	40011	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.