MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp2

Total Repeats: 129

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021225	ATC	2	6	3070	3075	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_021225	AAG	2	6	6087	6092	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_021225	CAA	2	6	6537	6542	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_021225	TCT	2	6	6616	6621	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_021225	TAT	2	6	6823	6828	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_021225	CTG	2	6	6861	6866	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_021225	ACG	2	6	6879	6884	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_021225	TGG	2	6	7051	7056	0 %	33.33 %	66.67 %	0 %	Non-Coding
9	NC_021225	ACC	2	6	7235	7240	33.33 %	0 %	0 %	66.67 %	Non-Coding
10	NC_021225	GTG	2	6	12875	12880	0 %	33.33 %	66.67 %	0 %	Non-Coding
11	NC_021225	TAC	2	6	12903	12908	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_021225	TAT	2	6	13158	13163	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_021225	TCG	2	6	13204	13209	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_021225	AAT	2	6	13368	13373	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_021225	TCC	2	6	13405	13410	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_021225	GCG	2	6	13461	13466	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_021225	TTG	2	6	13551	13556	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_021225	CAA	2	6	13635	13640	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_021225	TTG	2	6	18563	18568	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_021225	TAT	2	6	18637	18642	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_021225	GCT	2	6	18643	18648	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_021225	TGC	2	6	18653	18658	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_021225	TGA	2	6	18698	18703	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_021225	TCT	2	6	18743	18748	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_021225	TGA	2	6	18749	18754	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_021225	TGA	2	6	18806	18811	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_021225	CTT	2	6	18825	18830	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_021225	GTT	2	6	19003	19008	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_021225	TTG	2	6	19396	19401	0 %	66.67 %	33.33 %	0 %	Non-Coding
30	NC_021225	CGC	2	6	19467	19472	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_021225	TTC	2	6	19473	19478	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_021225	AAT	2	6	19482	19487	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_021225	AGA	2	6	19802	19807	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_021225	TTC	2	6	19830	19835	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_021225	GAG	2	6	20092	20097	33.33 %	0 %	66.67 %	0 %	Non-Coding
36	NC_021225	ATT	2	6	20177	20182	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_021225	AGG	2	6	21583	21588	33.33 %	0 %	66.67 %	0 %	Non-Coding
38	NC_021225	CTG	2	6	22442	22447	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_021225	TAA	2	6	22493	22498	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_021225	AAT	2	6	22506	22511	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_021225	ATT	2	6	22540	22545	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_021225	CAA	2	6	22570	22575	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_021225	CAC	2	6	22700	22705	33.33 %	0 %	0 %	66.67 %	Non-Coding
44	NC_021225	ATA	2	6	23179	23184	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_021225	TGA	2	6	26133	26138	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NC_021225	CTT	2	6	26639	26644	0 %	66.67 %	0 %	33.33 %	Non-Coding
47	NC_021225	ATG	2	6	26660	26665	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_021225	TTC	2	6	26684	26689	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_021225	AAT	2	6	26725	26730	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_021225	AGT	2	6	28795	28800	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_021225	CAA	2	6	28808	28813	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_021225	TAA	2	6	28875	28880	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_021225	TAT	2	6	28915	28920	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_021225	TGC	2	6	28986	28991	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_021225	CTA	2	6	29021	29026	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
56	NC_021225	TGA	2	6	29055	29060	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
57	NC_021225	TTA	2	6	29092	29097	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_021225	AGT	2	6	29110	29115	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_021225	GAT	2	6	29161	29166	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_021225	ATT	2	6	29724	29729	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_021225	AAT	2	6	29743	29748	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_021225	AAT	2	6	30600	30605	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_021225	AGT	2	6	30636	30641	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_021225	ATA	2	6	30847	30852	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_021225	CAA	2	6	30926	30931	66.67 %	0 %	0 %	33.33 %	Non-Coding
66	NC_021225	TAA	2	6	30933	30938	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_021225	TAT	2	6	30998	31003	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_021225	TAA	2	6	31020	31025	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_021225	TCT	2	6	32994	32999	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_021225	TTC	2	6	33053	33058	0 %	66.67 %	0 %	33.33 %	Non-Coding
71	NC_021225	ATT	2	6	33166	33171	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_021225	TAG	2	6	33862	33867	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_021225	AAT	2	6	33881	33886	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_021225	GAA	2	6	33896	33901	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_021225	ATA	2	6	33923	33928	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_021225	ATC	2	6	33936	33941	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_021225	GAA	2	6	34018	34023	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_021225	ATG	2	6	34135	34140	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
79	NC_021225	TAT	2	6	34194	34199	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_021225	AAC	2	6	34207	34212	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_021225	ATA	3	9	34214	34222	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_021225	GAC	2	6	34295	34300	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_021225	TCT	2	6	34636	34641	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_021225	TAT	2	6	35670	35675	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_021225	CCT	2	6	35729	35734	0 %	33.33 %	0 %	66.67 %	Non-Coding
86	NC_021225	GCC	2	6	35908	35913	0 %	0 %	33.33 %	66.67 %	Non-Coding
87	NC_021225	GGT	2	6	35972	35977	0 %	33.33 %	66.67 %	0 %	Non-Coding
88	NC_021225	TGG	2	6	36009	36014	0 %	33.33 %	66.67 %	0 %	Non-Coding
89	NC_021225	CTA	2	6	36050	36055	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
90	NC_021225	TGA	2	6	36096	36101	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_021225	GTA	2	6	36132	36137	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_021225	AGT	2	6	36173	36178	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_021225	GTT	2	6	36270	36275	0 %	66.67 %	33.33 %	0 %	Non-Coding
94	NC_021225	ACC	2	6	36284	36289	33.33 %	0 %	0 %	66.67 %	Non-Coding
95	NC_021225	TAA	2	6	36388	36393	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_021225	TGT	2	6	36394	36399	0 %	66.67 %	33.33 %	0 %	Non-Coding
97	NC_021225	ATG	2	6	36606	36611	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
98	NC_021225	ACC	2	6	36614	36619	33.33 %	0 %	0 %	66.67 %	Non-Coding
99	NC_021225	CCT	2	6	36808	36813	0 %	33.33 %	0 %	66.67 %	Non-Coding
100	NC_021225	ATT	2	6	36890	36895	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_021225	TAT	2	6	37980	37985	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_021225	AAG	2	6	38093	38098	66.67 %	0 %	33.33 %	0 %	Non-Coding
103	NC_021225	AAC	2	6	38124	38129	66.67 %	0 %	0 %	33.33 %	Non-Coding
104	NC_021225	AAC	2	6	38266	38271	66.67 %	0 %	0 %	33.33 %	Non-Coding
105	NC_021225	ACA	2	6	38527	38532	66.67 %	0 %	0 %	33.33 %	Non-Coding
106	NC_021225	CAG	2	6	38625	38630	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
107	NC_021225	ATA	2	6	38827	38832	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_021225	TTA	2	6	39013	39018	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_021225	TAA	2	6	39019	39024	66.67 %	33.33 %	0 %	0 %	Non-Coding
110	NC_021225	CTT	2	6	39161	39166	0 %	66.67 %	0 %	33.33 %	Non-Coding
111	NC_021225	TAA	2	6	39215	39220	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_021225	ACT	2	6	39260	39265	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
113	NC_021225	ACC	2	6	41155	41160	33.33 %	0 %	0 %	66.67 %	Non-Coding
114	NC_021225	CAG	2	6	41502	41507	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
115	NC_021225	TGT	2	6	41555	41560	0 %	66.67 %	33.33 %	0 %	Non-Coding
116	NC_021225	CAG	2	6	41604	41609	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
117	NC_021225	CCG	2	6	43992	43997	0 %	0 %	33.33 %	66.67 %	Non-Coding
118	NC_021225	GTC	2	6	44060	44065	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
119	NC_021225	GAG	2	6	44129	44134	33.33 %	0 %	66.67 %	0 %	Non-Coding
120	NC_021225	ATT	2	6	44214	44219	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_021225	ACA	2	6	44393	44398	66.67 %	0 %	0 %	33.33 %	Non-Coding
122	NC_021225	TAA	2	6	44422	44427	66.67 %	33.33 %	0 %	0 %	Non-Coding
123	NC_021225	CTG	2	6	44430	44435	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
124	NC_021225	AAG	2	6	44515	44520	66.67 %	0 %	33.33 %	0 %	Non-Coding
125	NC_021225	CTA	2	6	44534	44539	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
126	NC_021225	ATG	2	6	44578	44583	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
127	NC_021225	TAA	2	6	44652	44657	66.67 %	33.33 %	0 %	0 %	Non-Coding
128	NC_021225	ATT	2	6	46107	46112	33.33 %	66.67 %	0 %	0 %	Non-Coding
129	NC_021225	CAG	2	6	46263	46268	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.