MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus casei str. Zhang plasmid plca36

Total Repeats: 62

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_011352	AGA	2	6	1208	1213	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_011352	TAA	2	6	1322	1327	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_011352	GTA	2	6	1340	1345	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_011352	GTA	2	6	1351	1356	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_011352	TAA	2	6	1686	1691	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_011352	TGA	2	6	1702	1707	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_011352	AAT	2	6	3097	3102	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_011352	CAG	2	6	3198	3203	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_011352	AAC	2	6	3239	3244	66.67 %	0 %	0 %	33.33 %	Non-Coding
10	NC_011352	ACA	2	6	3299	3304	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_011352	ATA	2	6	5464	5469	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_011352	GAG	2	6	5825	5830	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_011352	GGA	2	6	15633	15638	33.33 %	0 %	66.67 %	0 %	Non-Coding
14	NC_011352	AGG	2	6	16040	16045	33.33 %	0 %	66.67 %	0 %	Non-Coding
15	NC_011352	GTT	2	6	19482	19487	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_011352	AAC	2	6	19543	19548	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_011352	GAG	2	6	21107	21112	33.33 %	0 %	66.67 %	0 %	Non-Coding
18	NC_011352	ATT	2	6	21192	21197	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_011352	ATG	2	6	21251	21256	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_011352	TAA	2	6	21325	21330	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_011352	CAA	2	6	22755	22760	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_011352	ATT	2	6	22780	22785	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_011352	TTA	2	6	23197	23202	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_011352	CTG	2	6	23233	23238	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_011352	TGG	2	6	23241	23246	0 %	33.33 %	66.67 %	0 %	Non-Coding
26	NC_011352	TGG	2	6	23285	23290	0 %	33.33 %	66.67 %	0 %	Non-Coding
27	NC_011352	GAT	2	6	23295	23300	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_011352	TAA	2	6	23303	23308	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_011352	ATT	2	6	23335	23340	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_011352	TAA	2	6	23341	23346	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_011352	TTC	2	6	24104	24109	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_011352	AGG	2	6	24163	24168	33.33 %	0 %	66.67 %	0 %	Non-Coding
33	NC_011352	CCT	2	6	27818	27823	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_011352	GCT	2	6	27968	27973	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_011352	TAA	2	6	28097	28102	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_011352	GAG	2	6	28182	28187	33.33 %	0 %	66.67 %	0 %	Non-Coding
37	NC_011352	ATT	2	6	28267	28272	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_011352	ATA	2	6	28449	28454	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_011352	CTT	2	6	28863	28868	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_011352	AAT	2	6	28924	28929	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_011352	TCT	2	6	28953	28958	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_011352	CAG	2	6	30079	30084	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
43	NC_011352	AAG	2	6	30161	30166	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_011352	TCA	3	9	30182	30190	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_011352	CAT	2	6	30202	30207	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_011352	GCT	2	6	30263	30268	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_011352	CAA	2	6	30460	30465	66.67 %	0 %	0 %	33.33 %	Non-Coding
48	NC_011352	CAC	2	6	30590	30595	33.33 %	0 %	0 %	66.67 %	Non-Coding
49	NC_011352	GAA	2	6	30676	30681	66.67 %	0 %	33.33 %	0 %	Non-Coding
50	NC_011352	AGC	2	6	31992	31997	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_011352	ATC	2	6	32698	32703	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_011352	CTT	2	6	32706	32711	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_011352	AGT	2	6	32769	32774	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_011352	GTA	2	6	32796	32801	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_011352	AAC	2	6	32951	32956	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_011352	AGG	2	6	34503	34508	33.33 %	0 %	66.67 %	0 %	Non-Coding
57	NC_011352	ATA	2	6	35303	35308	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_011352	ATG	2	6	35310	35315	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_011352	GAT	2	6	35704	35709	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_011352	TCT	2	6	35930	35935	0 %	66.67 %	0 %	33.33 %	Non-Coding
61	NC_011352	AAC	2	6	36029	36034	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_011352	GTT	2	6	36292	36297	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.