MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Lactobacillus gasseri ATCC 33323 chromosome

Total Repeats: 5649

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
5501	NC_008530	TTTAT	2	10	1843729	1843738	20 %	80 %	0 %	0 %	Non-Coding
5502	NC_008530	T	6	6	1843764	1843769	0 %	100 %	0 %	0 %	Non-Coding
5503	NC_008530	A	7	7	1843793	1843799	100 %	0 %	0 %	0 %	Non-Coding
5504	NC_008530	AGT	2	6	1844744	1844749	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5505	NC_008530	GCTA	2	8	1849346	1849353	25 %	25 %	25 %	25 %	Non-Coding
5506	NC_008530	TACC	2	8	1849372	1849379	25 %	25 %	0 %	50 %	Non-Coding
5507	NC_008530	AT	3	6	1849386	1849391	50 %	50 %	0 %	0 %	Non-Coding
5508	NC_008530	AAAT	2	8	1850199	1850206	75 %	25 %	0 %	0 %	Non-Coding
5509	NC_008530	TAA	2	6	1850217	1850222	66.67 %	33.33 %	0 %	0 %	Non-Coding
5510	NC_008530	GAT	2	6	1850255	1850260	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5511	NC_008530	CATA	2	8	1850279	1850286	50 %	25 %	0 %	25 %	Non-Coding
5512	NC_008530	A	6	6	1850730	1850735	100 %	0 %	0 %	0 %	Non-Coding
5513	NC_008530	ACA	2	6	1850747	1850752	66.67 %	0 %	0 %	33.33 %	Non-Coding
5514	NC_008530	GATT	2	8	1850756	1850763	25 %	50 %	25 %	0 %	Non-Coding
5515	NC_008530	AATC	2	8	1850789	1850796	50 %	25 %	0 %	25 %	Non-Coding
5516	NC_008530	T	6	6	1850803	1850808	0 %	100 %	0 %	0 %	Non-Coding
5517	NC_008530	TCT	2	6	1851655	1851660	0 %	66.67 %	0 %	33.33 %	Non-Coding
5518	NC_008530	A	7	7	1851685	1851691	100 %	0 %	0 %	0 %	Non-Coding
5519	NC_008530	TCTTT	2	10	1852554	1852563	0 %	80 %	0 %	20 %	Non-Coding
5520	NC_008530	T	6	6	1852570	1852575	0 %	100 %	0 %	0 %	Non-Coding
5521	NC_008530	T	6	6	1852592	1852597	0 %	100 %	0 %	0 %	Non-Coding
5522	NC_008530	A	6	6	1852613	1852618	100 %	0 %	0 %	0 %	Non-Coding
5523	NC_008530	AGAA	2	8	1852675	1852682	75 %	0 %	25 %	0 %	Non-Coding
5524	NC_008530	AT	3	6	1854068	1854073	50 %	50 %	0 %	0 %	Non-Coding
5525	NC_008530	TCA	2	6	1855382	1855387	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5526	NC_008530	TAAA	2	8	1855394	1855401	75 %	25 %	0 %	0 %	Non-Coding
5527	NC_008530	TAT	2	6	1855405	1855410	33.33 %	66.67 %	0 %	0 %	Non-Coding
5528	NC_008530	AAT	2	6	1855413	1855418	66.67 %	33.33 %	0 %	0 %	Non-Coding
5529	NC_008530	TACT	2	8	1855434	1855441	25 %	50 %	0 %	25 %	Non-Coding
5530	NC_008530	CTTT	2	8	1855461	1855468	0 %	75 %	0 %	25 %	Non-Coding
5531	NC_008530	ATTT	2	8	1855488	1855495	25 %	75 %	0 %	0 %	Non-Coding
5532	NC_008530	GGA	2	6	1855554	1855559	33.33 %	0 %	66.67 %	0 %	Non-Coding
5533	NC_008530	ATC	2	6	1856904	1856909	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5534	NC_008530	TTG	2	6	1856930	1856935	0 %	66.67 %	33.33 %	0 %	Non-Coding
5535	NC_008530	TAT	2	6	1856940	1856945	33.33 %	66.67 %	0 %	0 %	Non-Coding
5536	NC_008530	TATAA	2	10	1857022	1857031	60 %	40 %	0 %	0 %	Non-Coding
5537	NC_008530	AGG	2	6	1857090	1857095	33.33 %	0 %	66.67 %	0 %	Non-Coding
5538	NC_008530	TA	3	6	1857139	1857144	50 %	50 %	0 %	0 %	Non-Coding
5539	NC_008530	ATA	2	6	1857151	1857156	66.67 %	33.33 %	0 %	0 %	Non-Coding
5540	NC_008530	TTAC	2	8	1857164	1857171	25 %	50 %	0 %	25 %	Non-Coding
5541	NC_008530	TCA	2	6	1857230	1857235	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5542	NC_008530	CAA	2	6	1857270	1857275	66.67 %	0 %	0 %	33.33 %	Non-Coding
5543	NC_008530	AAT	3	9	1857278	1857286	66.67 %	33.33 %	0 %	0 %	Non-Coding
5544	NC_008530	TCATA	2	10	1857288	1857297	40 %	40 %	0 %	20 %	Non-Coding
5545	NC_008530	A	6	6	1857297	1857302	100 %	0 %	0 %	0 %	Non-Coding
5546	NC_008530	CAA	2	6	1857349	1857354	66.67 %	0 %	0 %	33.33 %	Non-Coding
5547	NC_008530	T	6	6	1857419	1857424	0 %	100 %	0 %	0 %	Non-Coding
5548	NC_008530	ACC	2	6	1857448	1857453	33.33 %	0 %	0 %	66.67 %	Non-Coding
5549	NC_008530	A	6	6	1857456	1857461	100 %	0 %	0 %	0 %	Non-Coding
5550	NC_008530	CGC	2	6	1857468	1857473	0 %	0 %	33.33 %	66.67 %	Non-Coding
5551	NC_008530	A	6	6	1857518	1857523	100 %	0 %	0 %	0 %	Non-Coding
5552	NC_008530	ACC	2	6	1857532	1857537	33.33 %	0 %	0 %	66.67 %	Non-Coding
5553	NC_008530	T	6	6	1857578	1857583	0 %	100 %	0 %	0 %	Non-Coding
5554	NC_008530	TA	3	6	1857594	1857599	50 %	50 %	0 %	0 %	Non-Coding
5555	NC_008530	AATG	2	8	1857602	1857609	50 %	25 %	25 %	0 %	Non-Coding
5556	NC_008530	ATATT	2	10	1858427	1858436	40 %	60 %	0 %	0 %	Non-Coding
5557	NC_008530	TAA	2	6	1858444	1858449	66.67 %	33.33 %	0 %	0 %	Non-Coding
5558	NC_008530	A	6	6	1858464	1858469	100 %	0 %	0 %	0 %	Non-Coding
5559	NC_008530	T	7	7	1858497	1858503	0 %	100 %	0 %	0 %	Non-Coding
5560	NC_008530	AAT	2	6	1858516	1858521	66.67 %	33.33 %	0 %	0 %	Non-Coding
5561	NC_008530	ATC	2	6	1858529	1858534	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5562	NC_008530	AGT	2	6	1860300	1860305	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5563	NC_008530	ACT	2	6	1860313	1860318	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5564	NC_008530	T	6	6	1860321	1860326	0 %	100 %	0 %	0 %	Non-Coding
5565	NC_008530	TA	3	6	1860387	1860392	50 %	50 %	0 %	0 %	Non-Coding
5566	NC_008530	TCG	2	6	1860393	1860398	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5567	NC_008530	T	6	6	1860495	1860500	0 %	100 %	0 %	0 %	Non-Coding
5568	NC_008530	T	6	6	1860516	1860521	0 %	100 %	0 %	0 %	Non-Coding
5569	NC_008530	TTTTA	2	10	1860525	1860534	20 %	80 %	0 %	0 %	Non-Coding
5570	NC_008530	T	6	6	1861891	1861896	0 %	100 %	0 %	0 %	Non-Coding
5571	NC_008530	AAT	2	6	1861908	1861913	66.67 %	33.33 %	0 %	0 %	Non-Coding
5572	NC_008530	ATT	2	6	1861930	1861935	33.33 %	66.67 %	0 %	0 %	Non-Coding
5573	NC_008530	AT	3	6	1861952	1861957	50 %	50 %	0 %	0 %	Non-Coding
5574	NC_008530	GAG	2	6	1861984	1861989	33.33 %	0 %	66.67 %	0 %	Non-Coding
5575	NC_008530	A	6	6	1862428	1862433	100 %	0 %	0 %	0 %	Non-Coding
5576	NC_008530	TTG	2	6	1863697	1863702	0 %	66.67 %	33.33 %	0 %	Non-Coding
5577	NC_008530	ACT	2	6	1864591	1864596	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5578	NC_008530	T	6	6	1866866	1866871	0 %	100 %	0 %	0 %	Non-Coding
5579	NC_008530	AAT	2	6	1867755	1867760	66.67 %	33.33 %	0 %	0 %	Non-Coding
5580	NC_008530	AAT	2	6	1867781	1867786	66.67 %	33.33 %	0 %	0 %	Non-Coding
5581	NC_008530	A	6	6	1869945	1869950	100 %	0 %	0 %	0 %	Non-Coding
5582	NC_008530	T	6	6	1869987	1869992	0 %	100 %	0 %	0 %	Non-Coding
5583	NC_008530	TCC	2	6	1871483	1871488	0 %	33.33 %	0 %	66.67 %	Non-Coding
5584	NC_008530	TCT	2	6	1871607	1871612	0 %	66.67 %	0 %	33.33 %	Non-Coding
5585	NC_008530	TAG	2	6	1871694	1871699	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5586	NC_008530	TAA	2	6	1875678	1875683	66.67 %	33.33 %	0 %	0 %	Non-Coding
5587	NC_008530	AATT	2	8	1875724	1875731	50 %	50 %	0 %	0 %	Non-Coding
5588	NC_008530	AT	3	6	1875769	1875774	50 %	50 %	0 %	0 %	Non-Coding
5589	NC_008530	AGG	2	6	1875789	1875794	33.33 %	0 %	66.67 %	0 %	Non-Coding
5590	NC_008530	T	6	6	1875796	1875801	0 %	100 %	0 %	0 %	Non-Coding
5591	NC_008530	GAT	2	6	1875814	1875819	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5592	NC_008530	T	6	6	1877187	1877192	0 %	100 %	0 %	0 %	Non-Coding
5593	NC_008530	TAAAA	2	10	1877194	1877203	80 %	20 %	0 %	0 %	Non-Coding
5594	NC_008530	AGG	2	6	1877216	1877221	33.33 %	0 %	66.67 %	0 %	Non-Coding
5595	NC_008530	TTTA	2	8	1877664	1877671	25 %	75 %	0 %	0 %	Non-Coding
5596	NC_008530	T	6	6	1877688	1877693	0 %	100 %	0 %	0 %	Non-Coding
5597	NC_008530	AAT	2	6	1877720	1877725	66.67 %	33.33 %	0 %	0 %	Non-Coding
5598	NC_008530	ATG	2	6	1877748	1877753	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5599	NC_008530	A	7	7	1877799	1877805	100 %	0 %	0 %	0 %	Non-Coding
5600	NC_008530	A	6	6	1877829	1877834	100 %	0 %	0 %	0 %	Non-Coding
5601	NC_008530	TTTA	2	8	1879755	1879762	25 %	75 %	0 %	0 %	Non-Coding
5602	NC_008530	CTT	2	6	1880432	1880437	0 %	66.67 %	0 %	33.33 %	Non-Coding
5603	NC_008530	TAT	2	6	1880457	1880462	33.33 %	66.67 %	0 %	0 %	Non-Coding
5604	NC_008530	AATT	2	8	1881137	1881144	50 %	50 %	0 %	0 %	Non-Coding
5605	NC_008530	TAA	2	6	1881171	1881176	66.67 %	33.33 %	0 %	0 %	Non-Coding
5606	NC_008530	TTTTTA	2	12	1881181	1881192	16.67 %	83.33 %	0 %	0 %	Non-Coding
5607	NC_008530	TAA	2	6	1881257	1881262	66.67 %	33.33 %	0 %	0 %	Non-Coding
5608	NC_008530	TAA	2	6	1881317	1881322	66.67 %	33.33 %	0 %	0 %	Non-Coding
5609	NC_008530	T	6	6	1881358	1881363	0 %	100 %	0 %	0 %	Non-Coding
5610	NC_008530	TTAA	2	8	1881379	1881386	50 %	50 %	0 %	0 %	Non-Coding
5611	NC_008530	AAT	2	6	1881398	1881403	66.67 %	33.33 %	0 %	0 %	Non-Coding
5612	NC_008530	TAC	2	6	1881404	1881409	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5613	NC_008530	TCT	2	6	1881411	1881416	0 %	66.67 %	0 %	33.33 %	Non-Coding
5614	NC_008530	CTA	2	6	1881456	1881461	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5615	NC_008530	AT	3	6	1882381	1882386	50 %	50 %	0 %	0 %	Non-Coding
5616	NC_008530	TA	4	8	1882399	1882406	50 %	50 %	0 %	0 %	Non-Coding
5617	NC_008530	TTG	2	6	1883789	1883794	0 %	66.67 %	33.33 %	0 %	Non-Coding
5618	NC_008530	TGA	2	6	1883810	1883815	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5619	NC_008530	A	7	7	1883881	1883887	100 %	0 %	0 %	0 %	Non-Coding
5620	NC_008530	TAA	2	6	1886990	1886995	66.67 %	33.33 %	0 %	0 %	Non-Coding
5621	NC_008530	TTC	2	6	1886998	1887003	0 %	66.67 %	0 %	33.33 %	Non-Coding
5622	NC_008530	CTA	2	6	1887006	1887011	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5623	NC_008530	T	6	6	1887018	1887023	0 %	100 %	0 %	0 %	Non-Coding
5624	NC_008530	A	7	7	1887060	1887066	100 %	0 %	0 %	0 %	Non-Coding
5625	NC_008530	TTTA	2	8	1887091	1887098	25 %	75 %	0 %	0 %	Non-Coding
5626	NC_008530	ATT	2	6	1887099	1887104	33.33 %	66.67 %	0 %	0 %	Non-Coding
5627	NC_008530	TTA	2	6	1888976	1888981	33.33 %	66.67 %	0 %	0 %	Non-Coding
5628	NC_008530	AT	3	6	1889009	1889014	50 %	50 %	0 %	0 %	Non-Coding
5629	NC_008530	ATT	2	6	1889041	1889046	33.33 %	66.67 %	0 %	0 %	Non-Coding
5630	NC_008530	CAA	2	6	1889120	1889125	66.67 %	0 %	0 %	33.33 %	Non-Coding
5631	NC_008530	A	7	7	1889124	1889130	100 %	0 %	0 %	0 %	Non-Coding
5632	NC_008530	A	7	7	1889133	1889139	100 %	0 %	0 %	0 %	Non-Coding
5633	NC_008530	T	7	7	1889150	1889156	0 %	100 %	0 %	0 %	Non-Coding
5634	NC_008530	ATAA	2	8	1892477	1892484	75 %	25 %	0 %	0 %	Non-Coding
5635	NC_008530	TAAA	2	8	1892486	1892493	75 %	25 %	0 %	0 %	Non-Coding
5636	NC_008530	A	7	7	1892491	1892497	100 %	0 %	0 %	0 %	Non-Coding
5637	NC_008530	CCA	2	6	1892507	1892512	33.33 %	0 %	0 %	66.67 %	Non-Coding
5638	NC_008530	ATG	2	6	1892524	1892529	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5639	NC_008530	ACT	2	6	1892544	1892549	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5640	NC_008530	CTTA	2	8	1893831	1893838	25 %	50 %	0 %	25 %	Non-Coding
5641	NC_008530	A	7	7	1893843	1893849	100 %	0 %	0 %	0 %	Non-Coding
5642	NC_008530	TAA	2	6	1894037	1894042	66.67 %	33.33 %	0 %	0 %	Non-Coding
5643	NC_008530	GAAAA	2	10	1894108	1894117	80 %	0 %	20 %	0 %	Non-Coding
5644	NC_008530	T	6	6	1894120	1894125	0 %	100 %	0 %	0 %	Non-Coding
5645	NC_008530	T	7	7	1894171	1894177	0 %	100 %	0 %	0 %	Non-Coding
5646	NC_008530	T	6	6	1894181	1894186	0 %	100 %	0 %	0 %	Non-Coding
5647	NC_008530	CAA	2	6	1894189	1894194	66.67 %	0 %	0 %	33.33 %	Non-Coding
5648	NC_008530	ATA	2	6	1894238	1894243	66.67 %	33.33 %	0 %	0 %	Non-Coding
5649	NC_008530	TAAA	2	8	1894257	1894264	75 %	25 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.