MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactococcus lactis subsp. cremoris SK11 plasmid 4

Total Repeats: 161

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008506	TCC	2	6	2140	2145	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_008506	CAA	3	9	5028	5036	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_008506	CCT	2	6	5052	5057	0 %	33.33 %	0 %	66.67 %	Non-Coding
4	NC_008506	TCA	2	6	5123	5128	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_008506	ATT	2	6	5234	5239	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_008506	TCA	2	6	5407	5412	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_008506	ACT	2	6	6324	6329	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_008506	AAT	2	6	6334	6339	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_008506	ATT	2	6	6429	6434	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_008506	CTA	2	6	6479	6484	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_008506	AGT	2	6	6593	6598	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_008506	TAA	2	6	7394	7399	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_008506	TTA	2	6	7818	7823	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_008506	TCA	2	6	7935	7940	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_008506	TCT	2	6	7941	7946	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_008506	CTA	2	6	8041	8046	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_008506	TCA	2	6	8071	8076	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_008506	AAT	2	6	9942	9947	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_008506	TTA	2	6	9967	9972	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_008506	CTT	2	6	9996	10001	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_008506	GGA	2	6	10030	10035	33.33 %	0 %	66.67 %	0 %	Non-Coding
22	NC_008506	TTA	2	6	10067	10072	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_008506	ATA	2	6	10083	10088	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_008506	TCA	3	9	10135	10143	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_008506	CAA	2	6	10203	10208	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_008506	AAT	2	6	10262	10267	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_008506	CAA	2	6	10304	10309	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_008506	GTC	2	6	10367	10372	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_008506	TCT	2	6	10390	10395	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_008506	AAT	2	6	10478	10483	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_008506	AAG	2	6	11248	11253	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_008506	CTA	2	6	11344	11349	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_008506	TCA	2	6	11445	11450	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_008506	CTT	2	6	11489	11494	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_008506	ATT	2	6	11523	11528	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_008506	ATT	2	6	11556	11561	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_008506	TAA	2	6	11610	11615	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_008506	ATT	2	6	14061	14066	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_008506	TGG	2	6	14171	14176	0 %	33.33 %	66.67 %	0 %	Non-Coding
40	NC_008506	AAT	2	6	14187	14192	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_008506	ATT	2	6	14309	14314	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_008506	TAT	2	6	14336	14341	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_008506	CTT	2	6	14429	14434	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_008506	TTC	2	6	15535	15540	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_008506	TGG	2	6	15610	15615	0 %	33.33 %	66.67 %	0 %	Non-Coding
46	NC_008506	TTA	2	6	15650	15655	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_008506	TCC	2	6	15685	15690	0 %	33.33 %	0 %	66.67 %	Non-Coding
48	NC_008506	AAT	2	6	15697	15702	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_008506	ATG	2	6	15839	15844	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_008506	TTA	2	6	15853	15858	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_008506	ACC	2	6	16016	16021	33.33 %	0 %	0 %	66.67 %	Non-Coding
52	NC_008506	CTG	2	6	16023	16028	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_008506	GAT	2	6	16046	16051	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_008506	ATT	2	6	16214	16219	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_008506	AAG	2	6	18164	18169	66.67 %	0 %	33.33 %	0 %	Non-Coding
56	NC_008506	AAT	2	6	20082	20087	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_008506	TGT	2	6	20173	20178	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_008506	TAA	2	6	24018	24023	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_008506	CTT	2	6	24031	24036	0 %	66.67 %	0 %	33.33 %	Non-Coding
60	NC_008506	ACA	2	6	24114	24119	66.67 %	0 %	0 %	33.33 %	Non-Coding
61	NC_008506	GGA	2	6	24125	24130	33.33 %	0 %	66.67 %	0 %	Non-Coding
62	NC_008506	AAT	2	6	24131	24136	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_008506	TAT	2	6	24167	24172	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_008506	ATT	2	6	25214	25219	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_008506	TTA	2	6	25396	25401	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_008506	GAA	2	6	26586	26591	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_008506	AGT	2	6	26705	26710	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_008506	ATA	2	6	27572	27577	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_008506	AGT	2	6	27588	27593	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
70	NC_008506	ATA	2	6	27611	27616	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_008506	ATT	2	6	27730	27735	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_008506	GAT	2	6	27881	27886	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_008506	AGA	2	6	27901	27906	66.67 %	0 %	33.33 %	0 %	Non-Coding
74	NC_008506	TTA	2	6	27912	27917	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_008506	GAT	2	6	27963	27968	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_008506	TGA	2	6	28087	28092	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_008506	CAT	2	6	28102	28107	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_008506	TTA	2	6	28117	28122	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_008506	TCA	2	6	28290	28295	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_008506	TTC	2	6	28298	28303	0 %	66.67 %	0 %	33.33 %	Non-Coding
81	NC_008506	AAT	2	6	28339	28344	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_008506	TTC	2	6	28373	28378	0 %	66.67 %	0 %	33.33 %	Non-Coding
83	NC_008506	AAT	2	6	28394	28399	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_008506	ATT	2	6	28448	28453	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_008506	AGA	2	6	28526	28531	66.67 %	0 %	33.33 %	0 %	Non-Coding
86	NC_008506	TAA	2	6	28681	28686	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_008506	TTC	2	6	28716	28721	0 %	66.67 %	0 %	33.33 %	Non-Coding
88	NC_008506	TTA	2	6	28722	28727	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_008506	GAT	2	6	28752	28757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
90	NC_008506	ACT	2	6	28767	28772	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_008506	GAC	2	6	28865	28870	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
92	NC_008506	CAA	2	6	28975	28980	66.67 %	0 %	0 %	33.33 %	Non-Coding
93	NC_008506	GTT	2	6	29117	29122	0 %	66.67 %	33.33 %	0 %	Non-Coding
94	NC_008506	GTG	2	6	29351	29356	0 %	33.33 %	66.67 %	0 %	Non-Coding
95	NC_008506	ATA	2	6	29496	29501	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_008506	ACA	2	6	29605	29610	66.67 %	0 %	0 %	33.33 %	Non-Coding
97	NC_008506	TTG	2	6	29656	29661	0 %	66.67 %	33.33 %	0 %	Non-Coding
98	NC_008506	TCA	2	6	29674	29679	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_008506	ATT	2	6	29769	29774	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_008506	AAG	2	6	29842	29847	66.67 %	0 %	33.33 %	0 %	Non-Coding
101	NC_008506	AAG	2	6	29887	29892	66.67 %	0 %	33.33 %	0 %	Non-Coding
102	NC_008506	ATT	2	6	30075	30080	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_008506	AGA	2	6	30272	30277	66.67 %	0 %	33.33 %	0 %	Non-Coding
104	NC_008506	AGA	2	6	30398	30403	66.67 %	0 %	33.33 %	0 %	Non-Coding
105	NC_008506	TTA	2	6	30453	30458	33.33 %	66.67 %	0 %	0 %	Non-Coding
106	NC_008506	ATT	2	6	30488	30493	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_008506	AAG	2	6	30646	30651	66.67 %	0 %	33.33 %	0 %	Non-Coding
108	NC_008506	TTG	2	6	30777	30782	0 %	66.67 %	33.33 %	0 %	Non-Coding
109	NC_008506	AGA	2	6	30796	30801	66.67 %	0 %	33.33 %	0 %	Non-Coding
110	NC_008506	TAA	2	6	30904	30909	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_008506	TAA	2	6	30963	30968	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_008506	AAT	2	6	31027	31032	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_008506	TGG	2	6	31117	31122	0 %	33.33 %	66.67 %	0 %	Non-Coding
114	NC_008506	AAT	2	6	31181	31186	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_008506	TCG	2	6	34996	35001	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
116	NC_008506	CAA	2	6	35112	35117	66.67 %	0 %	0 %	33.33 %	Non-Coding
117	NC_008506	ATA	2	6	35210	35215	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_008506	GTG	2	6	35281	35286	0 %	33.33 %	66.67 %	0 %	Non-Coding
119	NC_008506	ATA	2	6	37357	37362	66.67 %	33.33 %	0 %	0 %	Non-Coding
120	NC_008506	TGG	2	6	37402	37407	0 %	33.33 %	66.67 %	0 %	Non-Coding
121	NC_008506	ATA	2	6	38295	38300	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_008506	GAA	2	6	38466	38471	66.67 %	0 %	33.33 %	0 %	Non-Coding
123	NC_008506	GTT	2	6	38557	38562	0 %	66.67 %	33.33 %	0 %	Non-Coding
124	NC_008506	TTG	2	6	38621	38626	0 %	66.67 %	33.33 %	0 %	Non-Coding
125	NC_008506	ATT	2	6	40603	40608	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_008506	AAT	2	6	41739	41744	66.67 %	33.33 %	0 %	0 %	Non-Coding
127	NC_008506	TAA	3	9	41754	41762	66.67 %	33.33 %	0 %	0 %	Non-Coding
128	NC_008506	ATT	2	6	41781	41786	33.33 %	66.67 %	0 %	0 %	Non-Coding
129	NC_008506	GAC	2	6	42808	42813	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
130	NC_008506	ACA	2	6	42847	42852	66.67 %	0 %	0 %	33.33 %	Non-Coding
131	NC_008506	ATA	2	6	42865	42870	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_008506	CTG	2	6	42893	42898	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
133	NC_008506	CAA	2	6	42972	42977	66.67 %	0 %	0 %	33.33 %	Non-Coding
134	NC_008506	AAG	2	6	43008	43013	66.67 %	0 %	33.33 %	0 %	Non-Coding
135	NC_008506	TAT	2	6	43022	43027	33.33 %	66.67 %	0 %	0 %	Non-Coding
136	NC_008506	TGA	2	6	43149	43154	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_008506	ATG	2	6	43194	43199	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
138	NC_008506	TAT	2	6	43228	43233	33.33 %	66.67 %	0 %	0 %	Non-Coding
139	NC_008506	GAG	2	6	43248	43253	33.33 %	0 %	66.67 %	0 %	Non-Coding
140	NC_008506	TGT	2	6	43267	43272	0 %	66.67 %	33.33 %	0 %	Non-Coding
141	NC_008506	TAA	2	6	43383	43388	66.67 %	33.33 %	0 %	0 %	Non-Coding
142	NC_008506	GGT	2	6	43424	43429	0 %	33.33 %	66.67 %	0 %	Non-Coding
143	NC_008506	ATT	2	6	43437	43442	33.33 %	66.67 %	0 %	0 %	Non-Coding
144	NC_008506	TGA	2	6	43530	43535	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
145	NC_008506	TAA	2	6	43555	43560	66.67 %	33.33 %	0 %	0 %	Non-Coding
146	NC_008506	CTT	2	6	43686	43691	0 %	66.67 %	0 %	33.33 %	Non-Coding
147	NC_008506	GCA	2	6	43746	43751	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
148	NC_008506	AAT	2	6	43829	43834	66.67 %	33.33 %	0 %	0 %	Non-Coding
149	NC_008506	ATA	2	6	43940	43945	66.67 %	33.33 %	0 %	0 %	Non-Coding
150	NC_008506	ACA	2	6	44029	44034	66.67 %	0 %	0 %	33.33 %	Non-Coding
151	NC_008506	TTA	2	6	44048	44053	33.33 %	66.67 %	0 %	0 %	Non-Coding
152	NC_008506	ATT	2	6	44209	44214	33.33 %	66.67 %	0 %	0 %	Non-Coding
153	NC_008506	AAT	2	6	44292	44297	66.67 %	33.33 %	0 %	0 %	Non-Coding
154	NC_008506	TCC	2	6	44368	44373	0 %	33.33 %	0 %	66.67 %	Non-Coding
155	NC_008506	ATC	2	6	44447	44452	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
156	NC_008506	CAT	2	6	44460	44465	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
157	NC_008506	GAA	2	6	44540	44545	66.67 %	0 %	33.33 %	0 %	Non-Coding
158	NC_008506	AAT	2	6	45545	45550	66.67 %	33.33 %	0 %	0 %	Non-Coding
159	NC_008506	TAC	2	6	45674	45679	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
160	NC_008506	TAA	2	6	45733	45738	66.67 %	33.33 %	0 %	0 %	Non-Coding
161	NC_008506	ATT	2	6	45780	45785	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.