MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Lawsonia intracellularis PHE/MN1-00 plasmid 3

Total Repeats: 18

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008014	GAGGAA	2	12	30028	30039	50 %	0 %	50 %	0 %	Non-Coding
2	NC_008014	TTAAAA	2	12	46709	46720	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_008014	CAAAAA	2	12	51741	51752	83.33 %	0 %	0 %	16.67 %	Non-Coding
4	NC_008014	CATAGT	2	12	52039	52050	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
5	NC_008014	TATAAG	2	12	55654	55665	50 %	33.33 %	16.67 %	0 %	Non-Coding
6	NC_008014	AAAGAA	2	12	57921	57932	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_008014	TTTATA	2	12	69916	69927	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_008014	ATCATT	2	12	77693	77704	33.33 %	50 %	0 %	16.67 %	Non-Coding
9	NC_008014	ATTATA	2	12	88824	88835	50 %	50 %	0 %	0 %	Non-Coding
10	NC_008014	TAAAAA	2	12	93829	93840	83.33 %	16.67 %	0 %	0 %	Non-Coding
11	NC_008014	TGATAC	2	12	98597	98608	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
12	NC_008014	ATTAAT	2	12	107564	107575	50 %	50 %	0 %	0 %	Non-Coding
13	NC_008014	ATAATT	2	12	110267	110278	50 %	50 %	0 %	0 %	Non-Coding
14	NC_008014	CTTTAT	2	12	121769	121780	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
15	NC_008014	GTTATT	2	12	133254	133265	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
16	NC_008014	ATAGTT	2	12	140461	140472	33.33 %	50 %	16.67 %	0 %	Non-Coding
17	NC_008014	ACTATT	2	12	146256	146267	33.33 %	50 %	0 %	16.67 %	Non-Coding
18	NC_008014	TTTTCG	2	12	193345	193356	0 %	66.67 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.