MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus salivarius UCC118 plasmid pSF118-20

Total Repeats: 51

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006529	CCT	2	6	2136	2141	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_006529	TGT	2	6	2167	2172	0 %	66.67 %	33.33 %	0 %	Non-Coding
3	NC_006529	CTG	2	6	2268	2273	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_006529	AGG	2	6	2386	2391	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_006529	GTG	2	6	2616	2621	0 %	33.33 %	66.67 %	0 %	Non-Coding
6	NC_006529	AAC	2	6	5474	5479	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_006529	GTT	2	6	5525	5530	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_006529	GTT	2	6	5727	5732	0 %	66.67 %	33.33 %	0 %	Non-Coding
9	NC_006529	ATT	2	6	5847	5852	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_006529	TAA	2	6	6971	6976	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_006529	AAT	2	6	7000	7005	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_006529	TAC	2	6	7796	7801	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_006529	CTC	2	6	7917	7922	0 %	33.33 %	0 %	66.67 %	Non-Coding
14	NC_006529	ATT	2	6	7925	7930	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_006529	ACC	2	6	9538	9543	33.33 %	0 %	0 %	66.67 %	Non-Coding
16	NC_006529	TTC	2	6	9641	9646	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_006529	AGG	2	6	9700	9705	33.33 %	0 %	66.67 %	0 %	Non-Coding
18	NC_006529	TAC	2	6	10360	10365	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_006529	ATC	2	6	10366	10371	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
20	NC_006529	TAG	2	6	10561	10566	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_006529	TGG	2	6	10716	10721	0 %	33.33 %	66.67 %	0 %	Non-Coding
22	NC_006529	ATC	2	6	10825	10830	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_006529	TGT	2	6	10837	10842	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_006529	GGT	2	6	10860	10865	0 %	33.33 %	66.67 %	0 %	Non-Coding
25	NC_006529	GAT	2	6	10866	10871	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_006529	AGG	2	6	11644	11649	33.33 %	0 %	66.67 %	0 %	Non-Coding
27	NC_006529	CTT	2	6	12642	12647	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_006529	TTA	2	6	12747	12752	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_006529	AAT	2	6	12774	12779	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_006529	TGT	2	6	12782	12787	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_006529	AAG	2	6	13043	13048	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_006529	TCT	2	6	13061	13066	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_006529	ACC	2	6	13148	13153	33.33 %	0 %	0 %	66.67 %	Non-Coding
34	NC_006529	TTG	2	6	13249	13254	0 %	66.67 %	33.33 %	0 %	Non-Coding
35	NC_006529	ATC	2	6	13260	13265	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_006529	TTC	2	6	13272	13277	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_006529	AGT	2	6	13331	13336	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_006529	ATT	2	6	13381	13386	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_006529	GGT	2	6	14180	14185	0 %	33.33 %	66.67 %	0 %	Non-Coding
40	NC_006529	TTG	2	6	14311	14316	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_006529	TTA	2	6	15861	15866	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_006529	TGG	2	6	16404	16409	0 %	33.33 %	66.67 %	0 %	Non-Coding
43	NC_006529	GAG	2	6	16440	16445	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_006529	AAG	2	6	17370	17375	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_006529	CGG	2	6	17650	17655	0 %	0 %	66.67 %	33.33 %	Non-Coding
46	NC_006529	AAC	2	6	18153	18158	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_006529	AGG	2	6	18164	18169	33.33 %	0 %	66.67 %	0 %	Non-Coding
48	NC_006529	CAA	2	6	18839	18844	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_006529	ATT	2	6	18863	18868	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_006529	ATA	2	6	20353	20358	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_006529	TCT	2	6	20360	20365	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.