MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum WCFS1 plasmid pWCFS103

Total Repeats: 59

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006377	CTA	2	6	76	81	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_006377	TAC	2	6	88	93	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_006377	TTC	2	6	210	215	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_006377	TTG	2	6	611	616	0 %	66.67 %	33.33 %	0 %	Non-Coding
5	NC_006377	GGC	2	6	775	780	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_006377	CTA	3	9	1340	1348	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_006377	TCG	2	6	1365	1370	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_006377	ACC	2	6	1414	1419	33.33 %	0 %	0 %	66.67 %	Non-Coding
9	NC_006377	CTA	2	6	1451	1456	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_006377	TAG	2	6	1467	1472	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_006377	ACC	2	6	1544	1549	33.33 %	0 %	0 %	66.67 %	Non-Coding
12	NC_006377	CAC	2	6	1578	1583	33.33 %	0 %	0 %	66.67 %	Non-Coding
13	NC_006377	TTG	2	6	1602	1607	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_006377	ATA	2	6	1709	1714	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_006377	GTT	2	6	1806	1811	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_006377	GAA	2	6	1956	1961	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_006377	ATC	2	6	2003	2008	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_006377	GAC	2	6	3227	3232	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_006377	TAT	2	6	3298	3303	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_006377	GTA	2	6	3657	3662	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_006377	TAA	2	6	3752	3757	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_006377	AAG	2	6	4618	4623	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_006377	AAC	2	6	4869	4874	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_006377	AAT	2	6	4875	4880	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_006377	ATA	2	6	5010	5015	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_006377	AAT	2	6	5128	5133	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_006377	GCC	2	6	5181	5186	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_006377	GAA	2	6	5293	5298	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_006377	ATT	2	6	5303	5308	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_006377	TGC	2	6	5328	5333	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_006377	TAT	2	6	5657	5662	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_006377	GAG	2	6	6492	6497	33.33 %	0 %	66.67 %	0 %	Non-Coding
33	NC_006377	GGA	2	6	8285	8290	33.33 %	0 %	66.67 %	0 %	Non-Coding
34	NC_006377	AAC	2	6	11704	11709	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_006377	ATT	2	6	11718	11723	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_006377	CTA	2	6	11735	11740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_006377	GGC	2	6	11784	11789	0 %	0 %	66.67 %	33.33 %	Non-Coding
38	NC_006377	TCT	2	6	11845	11850	0 %	66.67 %	0 %	33.33 %	Non-Coding
39	NC_006377	ACA	2	6	11978	11983	66.67 %	0 %	0 %	33.33 %	Non-Coding
40	NC_006377	TAA	2	6	12010	12015	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_006377	GAG	2	6	12018	12023	33.33 %	0 %	66.67 %	0 %	Non-Coding
42	NC_006377	GTT	2	6	14658	14663	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_006377	TCC	2	6	18558	18563	0 %	33.33 %	0 %	66.67 %	Non-Coding
44	NC_006377	CCT	2	6	28102	28107	0 %	33.33 %	0 %	66.67 %	Non-Coding
45	NC_006377	TGT	2	6	28110	28115	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_006377	TTG	2	6	28116	28121	0 %	66.67 %	33.33 %	0 %	Non-Coding
47	NC_006377	TGT	2	6	30624	30629	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_006377	ACA	2	6	30671	30676	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_006377	CTG	2	6	30725	30730	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
50	NC_006377	ATT	2	6	30826	30831	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_006377	ATA	2	6	31698	31703	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_006377	TTG	2	6	31704	31709	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_006377	CTT	2	6	31725	31730	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_006377	CGA	2	6	31778	31783	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_006377	TAT	2	6	32526	32531	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_006377	AAT	2	6	32639	32644	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_006377	TCT	2	6	35945	35950	0 %	66.67 %	0 %	33.33 %	Non-Coding
58	NC_006377	CAA	2	6	35988	35993	66.67 %	0 %	0 %	33.33 %	Non-Coding
59	NC_006377	ATC	2	6	36061	36066	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.