MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome I

Total Repeats: 23572

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
23501	NC_005823	CAA	2	6	4268787	4268792	66.67 %	0 %	0 %	33.33 %	Non-Coding
23502	NC_005823	CTA	2	6	4268802	4268807	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23503	NC_005823	TAT	2	6	4268824	4268829	33.33 %	66.67 %	0 %	0 %	Non-Coding
23504	NC_005823	AAT	2	6	4268860	4268865	66.67 %	33.33 %	0 %	0 %	Non-Coding
23505	NC_005823	AGG	2	6	4268900	4268905	33.33 %	0 %	66.67 %	0 %	Non-Coding
23506	NC_005823	ACT	2	6	4268982	4268987	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23507	NC_005823	A	6	6	4269045	4269050	100 %	0 %	0 %	0 %	Non-Coding
23508	NC_005823	TTC	2	6	4269075	4269080	0 %	66.67 %	0 %	33.33 %	Non-Coding
23509	NC_005823	TGT	2	6	4269143	4269148	0 %	66.67 %	33.33 %	0 %	Non-Coding
23510	NC_005823	TCA	2	6	4269196	4269201	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23511	NC_005823	TTC	2	6	4269240	4269245	0 %	66.67 %	0 %	33.33 %	Non-Coding
23512	NC_005823	GGC	2	6	4269478	4269483	0 %	0 %	66.67 %	33.33 %	Non-Coding
23513	NC_005823	T	6	6	4269488	4269493	0 %	100 %	0 %	0 %	Non-Coding
23514	NC_005823	TTTCAG	2	12	4269511	4269522	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
23515	NC_005823	TTCC	2	8	4269526	4269533	0 %	50 %	0 %	50 %	Non-Coding
23516	NC_005823	TTC	2	6	4269547	4269552	0 %	66.67 %	0 %	33.33 %	Non-Coding
23517	NC_005823	CTTT	2	8	4269554	4269561	0 %	75 %	0 %	25 %	Non-Coding
23518	NC_005823	TCT	2	6	4269590	4269595	0 %	66.67 %	0 %	33.33 %	Non-Coding
23519	NC_005823	T	6	6	4269598	4269603	0 %	100 %	0 %	0 %	Non-Coding
23520	NC_005823	CTT	2	6	4269663	4269668	0 %	66.67 %	0 %	33.33 %	Non-Coding
23521	NC_005823	TATTCA	2	12	4269741	4269752	33.33 %	50 %	0 %	16.67 %	Non-Coding
23522	NC_005823	GTT	2	6	4269855	4269860	0 %	66.67 %	33.33 %	0 %	Non-Coding
23523	NC_005823	A	6	6	4269951	4269956	100 %	0 %	0 %	0 %	Non-Coding
23524	NC_005823	A	6	6	4269999	4270004	100 %	0 %	0 %	0 %	Non-Coding
23525	NC_005823	ATAAA	2	10	4270080	4270089	80 %	20 %	0 %	0 %	Non-Coding
23526	NC_005823	A	6	6	4270116	4270121	100 %	0 %	0 %	0 %	Non-Coding
23527	NC_005823	TAT	2	6	4270138	4270143	33.33 %	66.67 %	0 %	0 %	Non-Coding
23528	NC_005823	AATG	2	8	4270254	4270261	50 %	25 %	25 %	0 %	Non-Coding
23529	NC_005823	A	6	6	4270280	4270285	100 %	0 %	0 %	0 %	Non-Coding
23530	NC_005823	CTT	2	6	4270286	4270291	0 %	66.67 %	0 %	33.33 %	Non-Coding
23531	NC_005823	AATGA	2	10	4270371	4270380	60 %	20 %	20 %	0 %	Non-Coding
23532	NC_005823	T	6	6	4270457	4270462	0 %	100 %	0 %	0 %	Non-Coding
23533	NC_005823	GAT	2	6	4270519	4270524	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23534	NC_005823	CA	3	6	4271374	4271379	50 %	0 %	0 %	50 %	Non-Coding
23535	NC_005823	ACA	3	9	4271377	4271385	66.67 %	0 %	0 %	33.33 %	Non-Coding
23536	NC_005823	T	6	6	4271412	4271417	0 %	100 %	0 %	0 %	Non-Coding
23537	NC_005823	A	6	6	4271469	4271474	100 %	0 %	0 %	0 %	Non-Coding
23538	NC_005823	A	6	6	4271483	4271488	100 %	0 %	0 %	0 %	Non-Coding
23539	NC_005823	ATC	2	6	4271494	4271499	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23540	NC_005823	ATT	2	6	4271514	4271519	33.33 %	66.67 %	0 %	0 %	Non-Coding
23541	NC_005823	TAAA	2	8	4271719	4271726	75 %	25 %	0 %	0 %	Non-Coding
23542	NC_005823	TGT	2	6	4271811	4271816	0 %	66.67 %	33.33 %	0 %	Non-Coding
23543	NC_005823	T	6	6	4271816	4271821	0 %	100 %	0 %	0 %	Non-Coding
23544	NC_005823	AGA	2	6	4271879	4271884	66.67 %	0 %	33.33 %	0 %	Non-Coding
23545	NC_005823	ACT	2	6	4271929	4271934	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23546	NC_005823	A	7	7	4272014	4272020	100 %	0 %	0 %	0 %	Non-Coding
23547	NC_005823	ACT	2	6	4272146	4272151	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23548	NC_005823	ACA	2	6	4272202	4272207	66.67 %	0 %	0 %	33.33 %	Non-Coding
23549	NC_005823	A	7	7	4272221	4272227	100 %	0 %	0 %	0 %	Non-Coding
23550	NC_005823	ATAA	2	8	4272315	4272322	75 %	25 %	0 %	0 %	Non-Coding
23551	NC_005823	ATC	2	6	4272347	4272352	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23552	NC_005823	A	6	6	4272367	4272372	100 %	0 %	0 %	0 %	Non-Coding
23553	NC_005823	ATT	2	6	4272381	4272386	33.33 %	66.67 %	0 %	0 %	Non-Coding
23554	NC_005823	AGA	2	6	4272422	4272427	66.67 %	0 %	33.33 %	0 %	Non-Coding
23555	NC_005823	T	6	6	4272428	4272433	0 %	100 %	0 %	0 %	Non-Coding
23556	NC_005823	A	6	6	4272550	4272555	100 %	0 %	0 %	0 %	Non-Coding
23557	NC_005823	AGA	2	6	4272658	4272663	66.67 %	0 %	33.33 %	0 %	Non-Coding
23558	NC_005823	T	6	6	4272664	4272669	0 %	100 %	0 %	0 %	Non-Coding
23559	NC_005823	A	6	6	4272786	4272791	100 %	0 %	0 %	0 %	Non-Coding
23560	NC_005823	AGA	2	6	4272894	4272899	66.67 %	0 %	33.33 %	0 %	Non-Coding
23561	NC_005823	T	6	6	4272900	4272905	0 %	100 %	0 %	0 %	Non-Coding
23562	NC_005823	A	6	6	4272938	4272943	100 %	0 %	0 %	0 %	Non-Coding
23563	NC_005823	CAA	2	6	4272963	4272968	66.67 %	0 %	0 %	33.33 %	Non-Coding
23564	NC_005823	GTC	2	6	4272992	4272997	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23565	NC_005823	CAA	2	6	4273091	4273096	66.67 %	0 %	0 %	33.33 %	Non-Coding
23566	NC_005823	ATTA	2	8	4275028	4275035	50 %	50 %	0 %	0 %	Non-Coding
23567	NC_005823	AT	3	6	4277015	4277020	50 %	50 %	0 %	0 %	Non-Coding
23568	NC_005823	AT	3	6	4277033	4277038	50 %	50 %	0 %	0 %	Non-Coding
23569	NC_005823	A	6	6	4277076	4277081	100 %	0 %	0 %	0 %	Non-Coding
23570	NC_005823	AAT	2	6	4277093	4277098	66.67 %	33.33 %	0 %	0 %	Non-Coding
23571	NC_005823	TAAT	2	8	4277106	4277113	50 %	50 %	0 %	0 %	Non-Coding
23572	NC_005823	T	7	7	4277136	4277142	0 %	100 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.