MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Listeria innocua Clip11262 plasmid pLI100

Total Repeats: 191

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003383	CTT	2	6	538	543	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_003383	TCC	2	6	814	819	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_003383	ATA	2	6	4853	4858	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_003383	ATT	2	6	5953	5958	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_003383	CTC	2	6	5970	5975	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_003383	CCT	2	6	6767	6772	0 %	33.33 %	0 %	66.67 %	Non-Coding
7	NC_003383	GCT	2	6	6814	6819	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_003383	GCA	2	6	6834	6839	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_003383	AAT	2	6	6874	6879	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_003383	CTT	2	6	6915	6920	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_003383	CCT	2	6	6928	6933	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_003383	TGT	2	6	6955	6960	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_003383	ACT	2	6	7007	7012	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_003383	GTC	2	6	7069	7074	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_003383	AAT	2	6	9303	9308	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_003383	ATA	2	6	9372	9377	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_003383	CGT	2	6	9445	9450	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_003383	GGT	2	6	9454	9459	0 %	33.33 %	66.67 %	0 %	Non-Coding
19	NC_003383	TGG	2	6	9522	9527	0 %	33.33 %	66.67 %	0 %	Non-Coding
20	NC_003383	CTA	2	6	9581	9586	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_003383	AAT	2	6	9600	9605	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_003383	AGG	2	6	9619	9624	33.33 %	0 %	66.67 %	0 %	Non-Coding
23	NC_003383	AAT	2	6	12863	12868	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_003383	TAT	2	6	13035	13040	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_003383	TCA	2	6	13223	13228	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_003383	TTG	2	6	13242	13247	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_003383	ATA	2	6	13655	13660	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_003383	GTT	2	6	13717	13722	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_003383	ATA	2	6	13738	13743	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_003383	ATT	2	6	13761	13766	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_003383	AAT	2	6	13888	13893	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_003383	ATT	2	6	13988	13993	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_003383	AGC	2	6	14061	14066	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_003383	TGA	2	6	14100	14105	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_003383	AAT	2	6	14215	14220	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_003383	TAT	2	6	14387	14392	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_003383	AAT	2	6	14503	14508	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_003383	TTC	2	6	15227	15232	0 %	66.67 %	0 %	33.33 %	Non-Coding
39	NC_003383	AAT	2	6	15245	15250	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_003383	TAT	2	6	15374	15379	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_003383	TTC	2	6	21953	21958	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_003383	TAT	2	6	21966	21971	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_003383	ATA	2	6	21975	21980	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_003383	AAG	2	6	22115	22120	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_003383	TTC	2	6	22851	22856	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_003383	AAT	2	6	22869	22874	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_003383	ATT	2	6	23661	23666	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_003383	TCC	2	6	27414	27419	0 %	33.33 %	0 %	66.67 %	Non-Coding
49	NC_003383	TAT	2	6	27433	27438	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_003383	GGT	2	6	29288	29293	0 %	33.33 %	66.67 %	0 %	Non-Coding
51	NC_003383	CTA	2	6	29314	29319	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_003383	AAT	2	6	29333	29338	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_003383	AGG	2	6	29352	29357	33.33 %	0 %	66.67 %	0 %	Non-Coding
54	NC_003383	TGG	2	6	30150	30155	0 %	33.33 %	66.67 %	0 %	Non-Coding
55	NC_003383	AAC	2	6	30185	30190	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_003383	GAA	2	6	30222	30227	66.67 %	0 %	33.33 %	0 %	Non-Coding
57	NC_003383	GAA	2	6	31090	31095	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_003383	TAT	2	6	31179	31184	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_003383	AGA	2	6	31189	31194	66.67 %	0 %	33.33 %	0 %	Non-Coding
60	NC_003383	ATG	3	9	31587	31595	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_003383	AGG	2	6	31606	31611	33.33 %	0 %	66.67 %	0 %	Non-Coding
62	NC_003383	ATG	2	6	33431	33436	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_003383	AAG	2	6	34514	34519	66.67 %	0 %	33.33 %	0 %	Non-Coding
64	NC_003383	AAG	2	6	34527	34532	66.67 %	0 %	33.33 %	0 %	Non-Coding
65	NC_003383	TTA	2	6	34540	34545	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_003383	ATG	2	6	37307	37312	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_003383	AGA	2	6	37332	37337	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_003383	TTG	2	6	37442	37447	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_003383	AAT	2	6	38252	38257	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_003383	AGG	2	6	38271	38276	33.33 %	0 %	66.67 %	0 %	Non-Coding
71	NC_003383	TCC	2	6	39127	39132	0 %	33.33 %	0 %	66.67 %	Non-Coding
72	NC_003383	TAT	2	6	39146	39151	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_003383	TAG	2	6	39166	39171	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_003383	AAG	2	6	39242	39247	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_003383	TCT	2	6	40777	40782	0 %	66.67 %	0 %	33.33 %	Non-Coding
76	NC_003383	AAT	2	6	42520	42525	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_003383	AAT	2	6	42533	42538	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_003383	AAT	2	6	42546	42551	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_003383	ATT	2	6	42578	42583	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_003383	TAT	2	6	43569	43574	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_003383	GAC	2	6	43606	43611	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
82	NC_003383	ATT	2	6	43709	43714	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_003383	GCA	2	6	43719	43724	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
84	NC_003383	AGG	2	6	43812	43817	33.33 %	0 %	66.67 %	0 %	Non-Coding
85	NC_003383	ATG	2	6	43868	43873	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_003383	AAG	2	6	43875	43880	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_003383	ATA	2	6	46998	47003	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_003383	TAG	2	6	47181	47186	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
89	NC_003383	AAT	2	6	47218	47223	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_003383	TTA	2	6	47328	47333	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_003383	TAT	2	6	47496	47501	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_003383	ATA	2	6	47557	47562	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_003383	TAC	2	6	51039	51044	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_003383	ATT	2	6	51076	51081	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_003383	AGC	2	6	51184	51189	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
96	NC_003383	ATT	2	6	51213	51218	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_003383	TGG	2	6	51242	51247	0 %	33.33 %	66.67 %	0 %	Non-Coding
98	NC_003383	AGG	2	6	55483	55488	33.33 %	0 %	66.67 %	0 %	Non-Coding
99	NC_003383	TAA	2	6	55494	55499	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_003383	ATA	2	6	56354	56359	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_003383	TAT	2	6	56523	56528	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_003383	ATT	2	6	56823	56828	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_003383	TAG	2	6	57509	57514	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
104	NC_003383	CTT	2	6	57586	57591	0 %	66.67 %	0 %	33.33 %	Non-Coding
105	NC_003383	CCT	2	6	59920	59925	0 %	33.33 %	0 %	66.67 %	Non-Coding
106	NC_003383	ATT	2	6	59937	59942	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_003383	TAT	3	9	60739	60747	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_003383	TTA	2	6	60751	60756	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_003383	TTA	2	6	60794	60799	33.33 %	66.67 %	0 %	0 %	Non-Coding
110	NC_003383	AGA	2	6	60829	60834	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_003383	ATA	2	6	60901	60906	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_003383	ACA	2	6	63419	63424	66.67 %	0 %	0 %	33.33 %	Non-Coding
113	NC_003383	AAG	2	6	63430	63435	66.67 %	0 %	33.33 %	0 %	Non-Coding
114	NC_003383	CTT	2	6	63454	63459	0 %	66.67 %	0 %	33.33 %	Non-Coding
115	NC_003383	TTA	2	6	63542	63547	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_003383	ATA	2	6	63583	63588	66.67 %	33.33 %	0 %	0 %	Non-Coding
117	NC_003383	ATT	3	9	63646	63654	33.33 %	66.67 %	0 %	0 %	Non-Coding
118	NC_003383	CAC	2	6	63683	63688	33.33 %	0 %	0 %	66.67 %	Non-Coding
119	NC_003383	CTA	2	6	63712	63717	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
120	NC_003383	ACA	2	6	63726	63731	66.67 %	0 %	0 %	33.33 %	Non-Coding
121	NC_003383	AAG	2	6	63733	63738	66.67 %	0 %	33.33 %	0 %	Non-Coding
122	NC_003383	ATC	2	6	63755	63760	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
123	NC_003383	TGC	2	6	63791	63796	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
124	NC_003383	TGG	2	6	63828	63833	0 %	33.33 %	66.67 %	0 %	Non-Coding
125	NC_003383	GGA	2	6	63844	63849	33.33 %	0 %	66.67 %	0 %	Non-Coding
126	NC_003383	GAT	2	6	63920	63925	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
127	NC_003383	ACT	2	6	63951	63956	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
128	NC_003383	ATC	2	6	64035	64040	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
129	NC_003383	ATT	2	6	64581	64586	33.33 %	66.67 %	0 %	0 %	Non-Coding
130	NC_003383	GAA	2	6	64599	64604	66.67 %	0 %	33.33 %	0 %	Non-Coding
131	NC_003383	GAG	2	6	64612	64617	33.33 %	0 %	66.67 %	0 %	Non-Coding
132	NC_003383	CTT	2	6	65335	65340	0 %	66.67 %	0 %	33.33 %	Non-Coding
133	NC_003383	ATA	2	6	65508	65513	66.67 %	33.33 %	0 %	0 %	Non-Coding
134	NC_003383	GGA	2	6	65515	65520	33.33 %	0 %	66.67 %	0 %	Non-Coding
135	NC_003383	ATT	2	6	66969	66974	33.33 %	66.67 %	0 %	0 %	Non-Coding
136	NC_003383	TAA	2	6	66975	66980	66.67 %	33.33 %	0 %	0 %	Non-Coding
137	NC_003383	TTG	2	6	67045	67050	0 %	66.67 %	33.33 %	0 %	Non-Coding
138	NC_003383	GAG	2	6	67051	67056	33.33 %	0 %	66.67 %	0 %	Non-Coding
139	NC_003383	CTT	2	6	68708	68713	0 %	66.67 %	0 %	33.33 %	Non-Coding
140	NC_003383	ATT	2	6	68975	68980	33.33 %	66.67 %	0 %	0 %	Non-Coding
141	NC_003383	TCC	2	6	70248	70253	0 %	33.33 %	0 %	66.67 %	Non-Coding
142	NC_003383	TAC	2	6	70586	70591	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
143	NC_003383	CTT	2	6	70645	70650	0 %	66.67 %	0 %	33.33 %	Non-Coding
144	NC_003383	TGT	2	6	70778	70783	0 %	66.67 %	33.33 %	0 %	Non-Coding
145	NC_003383	TGT	2	6	72566	72571	0 %	66.67 %	33.33 %	0 %	Non-Coding
146	NC_003383	TAC	2	6	72623	72628	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
147	NC_003383	GGA	2	6	72630	72635	33.33 %	0 %	66.67 %	0 %	Non-Coding
148	NC_003383	TTA	2	6	72653	72658	33.33 %	66.67 %	0 %	0 %	Non-Coding
149	NC_003383	TAA	2	6	72712	72717	66.67 %	33.33 %	0 %	0 %	Non-Coding
150	NC_003383	ATT	2	6	72794	72799	33.33 %	66.67 %	0 %	0 %	Non-Coding
151	NC_003383	GAA	2	6	72812	72817	66.67 %	0 %	33.33 %	0 %	Non-Coding
152	NC_003383	GAG	2	6	72825	72830	33.33 %	0 %	66.67 %	0 %	Non-Coding
153	NC_003383	CCT	2	6	74383	74388	0 %	33.33 %	0 %	66.67 %	Non-Coding
154	NC_003383	CCA	2	6	74397	74402	33.33 %	0 %	0 %	66.67 %	Non-Coding
155	NC_003383	ATT	2	6	74411	74416	33.33 %	66.67 %	0 %	0 %	Non-Coding
156	NC_003383	TTC	2	6	74422	74427	0 %	66.67 %	0 %	33.33 %	Non-Coding
157	NC_003383	TGG	2	6	74485	74490	0 %	33.33 %	66.67 %	0 %	Non-Coding
158	NC_003383	TGA	2	6	74584	74589	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
159	NC_003383	CTT	2	6	74682	74687	0 %	66.67 %	0 %	33.33 %	Non-Coding
160	NC_003383	CTG	2	6	74724	74729	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
161	NC_003383	TCT	2	6	74802	74807	0 %	66.67 %	0 %	33.33 %	Non-Coding
162	NC_003383	CCA	2	6	74858	74863	33.33 %	0 %	0 %	66.67 %	Non-Coding
163	NC_003383	AAT	2	6	74894	74899	66.67 %	33.33 %	0 %	0 %	Non-Coding
164	NC_003383	ATG	2	6	74906	74911	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
165	NC_003383	ATT	2	6	76176	76181	33.33 %	66.67 %	0 %	0 %	Non-Coding
166	NC_003383	GCA	2	6	76836	76841	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
167	NC_003383	CAT	2	6	77016	77021	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
168	NC_003383	AAC	2	6	77097	77102	66.67 %	0 %	0 %	33.33 %	Non-Coding
169	NC_003383	ATA	2	6	77239	77244	66.67 %	33.33 %	0 %	0 %	Non-Coding
170	NC_003383	AAT	2	6	77361	77366	66.67 %	33.33 %	0 %	0 %	Non-Coding
171	NC_003383	ACT	2	6	77425	77430	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
172	NC_003383	TCC	2	6	77443	77448	0 %	33.33 %	0 %	66.67 %	Non-Coding
173	NC_003383	GAT	2	6	77589	77594	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
174	NC_003383	TCA	2	6	77605	77610	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
175	NC_003383	ATC	2	6	77694	77699	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
176	NC_003383	GTT	2	6	77794	77799	0 %	66.67 %	33.33 %	0 %	Non-Coding
177	NC_003383	ATG	2	6	79244	79249	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
178	NC_003383	TAG	2	6	79253	79258	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
179	NC_003383	TGC	2	6	79377	79382	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
180	NC_003383	TGA	2	6	79623	79628	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
181	NC_003383	GGA	2	6	79630	79635	33.33 %	0 %	66.67 %	0 %	Non-Coding
182	NC_003383	AGA	2	6	79659	79664	66.67 %	0 %	33.33 %	0 %	Non-Coding
183	NC_003383	GCA	2	6	79744	79749	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
184	NC_003383	TTA	2	6	79773	79778	33.33 %	66.67 %	0 %	0 %	Non-Coding
185	NC_003383	ATC	2	6	79797	79802	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
186	NC_003383	GAA	2	6	79804	79809	66.67 %	0 %	33.33 %	0 %	Non-Coding
187	NC_003383	ACT	2	6	79817	79822	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
188	NC_003383	ATT	2	6	79849	79854	33.33 %	66.67 %	0 %	0 %	Non-Coding
189	NC_003383	ATT	2	6	79966	79971	33.33 %	66.67 %	0 %	0 %	Non-Coding
190	NC_003383	GAT	2	6	80091	80096	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
191	NC_003383	GAA	3	9	80230	80238	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.