MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Halophilic archaeon DL31 plasmid phalar02

Total Repeats: 80

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015959	TTA	2	6	90	95	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_015959	ACT	2	6	1665	1670	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_015959	GGA	2	6	1695	1700	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_015959	CGC	2	6	1715	1720	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_015959	CGT	2	6	1869	1874	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_015959	ACG	2	6	1902	1907	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_015959	CGA	2	6	1959	1964	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_015959	GCG	2	6	3114	3119	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_015959	ACC	2	6	3123	3128	33.33 %	0 %	0 %	66.67 %	Non-Coding
10	NC_015959	TCC	2	6	3402	3407	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_015959	TCG	2	6	4491	4496	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_015959	GAG	2	6	4502	4507	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_015959	CGG	2	6	4521	4526	0 %	0 %	66.67 %	33.33 %	Non-Coding
14	NC_015959	CGC	2	6	4534	4539	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_015959	CCG	2	6	4555	4560	0 %	0 %	33.33 %	66.67 %	Non-Coding
16	NC_015959	CAA	2	6	4608	4613	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_015959	ACA	2	6	4661	4666	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_015959	AAT	2	6	4687	4692	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_015959	ACG	2	6	4735	4740	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_015959	GAG	2	6	4743	4748	33.33 %	0 %	66.67 %	0 %	Non-Coding
21	NC_015959	GAG	3	9	4761	4769	33.33 %	0 %	66.67 %	0 %	Non-Coding
22	NC_015959	GTT	2	6	4817	4822	0 %	66.67 %	33.33 %	0 %	Non-Coding
23	NC_015959	ACT	2	6	4839	4844	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_015959	ACA	2	6	5285	5290	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_015959	GCT	2	6	5307	5312	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_015959	ATA	2	6	5373	5378	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_015959	ACC	2	6	5400	5405	33.33 %	0 %	0 %	66.67 %	Non-Coding
28	NC_015959	CTC	2	6	9697	9702	0 %	33.33 %	0 %	66.67 %	Non-Coding
29	NC_015959	GCC	2	6	9896	9901	0 %	0 %	33.33 %	66.67 %	Non-Coding
30	NC_015959	CGC	2	6	10033	10038	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_015959	CGT	2	6	10249	10254	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
32	NC_015959	CGC	2	6	11045	11050	0 %	0 %	33.33 %	66.67 %	Non-Coding
33	NC_015959	CGA	2	6	11148	11153	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_015959	ACG	2	6	11243	11248	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_015959	ACG	2	6	11399	11404	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_015959	CGC	2	6	11438	11443	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_015959	ACC	2	6	11720	11725	33.33 %	0 %	0 %	66.67 %	Non-Coding
38	NC_015959	CGG	2	6	11827	11832	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_015959	GGA	2	6	12771	12776	33.33 %	0 %	66.67 %	0 %	Non-Coding
40	NC_015959	TGC	2	6	12841	12846	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_015959	GCT	2	6	12897	12902	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_015959	GCT	2	6	14256	14261	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_015959	GAG	2	6	14283	14288	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_015959	ACG	2	6	14769	14774	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
45	NC_015959	AAG	2	6	14781	14786	66.67 %	0 %	33.33 %	0 %	Non-Coding
46	NC_015959	GCT	2	6	14851	14856	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_015959	CGG	2	6	14879	14884	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_015959	ATT	2	6	14893	14898	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_015959	CGA	2	6	14923	14928	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_015959	TCT	2	6	14945	14950	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_015959	ACT	2	6	15035	15040	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_015959	GAC	2	6	15041	15046	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_015959	AAG	2	6	15071	15076	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_015959	ACG	2	6	15083	15088	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_015959	TCC	2	6	15131	15136	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_015959	GCG	2	6	15197	15202	0 %	0 %	66.67 %	33.33 %	Non-Coding
57	NC_015959	AAC	2	6	16087	16092	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_015959	CTC	2	6	16200	16205	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_015959	CAG	2	6	16222	16227	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_015959	TAA	2	6	16235	16240	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_015959	CAG	2	6	16371	16376	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_015959	GAA	2	6	17469	17474	66.67 %	0 %	33.33 %	0 %	Non-Coding
63	NC_015959	CCG	2	6	17840	17845	0 %	0 %	33.33 %	66.67 %	Non-Coding
64	NC_015959	TCT	2	6	17907	17912	0 %	66.67 %	0 %	33.33 %	Non-Coding
65	NC_015959	CGA	2	6	18029	18034	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
66	NC_015959	GGC	2	6	18073	18078	0 %	0 %	66.67 %	33.33 %	Non-Coding
67	NC_015959	GCC	2	6	18084	18089	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_015959	GCA	2	6	20525	20530	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_015959	TGT	2	6	20882	20887	0 %	66.67 %	33.33 %	0 %	Non-Coding
70	NC_015959	TTG	2	6	20934	20939	0 %	66.67 %	33.33 %	0 %	Non-Coding
71	NC_015959	ACG	2	6	20947	20952	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_015959	TAC	2	6	21055	21060	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_015959	CGA	3	9	21072	21080	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_015959	ACA	2	6	21097	21102	66.67 %	0 %	0 %	33.33 %	Non-Coding
75	NC_015959	ACC	2	6	21452	21457	33.33 %	0 %	0 %	66.67 %	Non-Coding
76	NC_015959	GTA	2	6	21529	21534	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_015959	TAC	2	6	22515	22520	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_015959	ACG	2	6	22863	22868	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
79	NC_015959	TCC	2	6	22872	22877	0 %	33.33 %	0 %	66.67 %	Non-Coding
80	NC_015959	CTA	2	6	23642	23647	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.