MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Haloferax volcanii DS2 plasmid pHV3

Total Repeats: 23

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013964	GAACCA	2	12	4726	4737	50 %	0 %	16.67 %	33.33 %	Non-Coding
2	NC_013964	CGCGGC	2	12	41676	41687	0 %	0 %	50 %	50 %	Non-Coding
3	NC_013964	AAGCGA	2	12	75194	75205	50 %	0 %	33.33 %	16.67 %	Non-Coding
4	NC_013964	GTTCGC	2	12	95589	95600	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_013964	CCTCAC	2	12	107038	107049	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
6	NC_013964	GAGCCG	2	12	130130	130141	16.67 %	0 %	50 %	33.33 %	Non-Coding
7	NC_013964	TCTCAC	2	12	143346	143357	16.67 %	33.33 %	0 %	50 %	Non-Coding
8	NC_013964	GAGGGC	2	12	145161	145172	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
9	NC_013964	GTTCAG	2	12	200017	200028	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
10	NC_013964	CCGACC	2	12	208855	208866	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
11	NC_013964	CCGTCC	3	18	219630	219647	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
12	NC_013964	CTGAAT	2	12	230804	230815	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
13	NC_013964	ACCCGC	2	12	232836	232847	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
14	NC_013964	CGACGG	2	12	265639	265650	16.67 %	0 %	50 %	33.33 %	Non-Coding
15	NC_013964	CGCTGT	2	12	266688	266699	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_013964	GACCAT	2	12	267120	267131	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
17	NC_013964	ATTACA	2	12	276512	276523	50 %	33.33 %	0 %	16.67 %	Non-Coding
18	NC_013964	CGCTCG	2	12	323745	323756	0 %	16.67 %	33.33 %	50 %	Non-Coding
19	NC_013964	TTGCGC	2	12	384216	384227	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_013964	CGGGCG	2	12	387913	387924	0 %	0 %	66.67 %	33.33 %	Non-Coding
21	NC_013964	CTGTGA	2	12	389017	389028	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
22	NC_013964	GGGGTC	2	12	389085	389096	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
23	NC_013964	CCGAGA	2	12	416161	416172	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.