MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Halobacterium salinarum R1 plasmid PHS2

Total Repeats: 21

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_010369	CAAAAA	2	12	5004	5015	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_010369	AGTCCG	2	12	7925	7936	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
3	NC_010369	CGGGCG	2	12	49728	49739	0 %	0 %	66.67 %	33.33 %	Non-Coding
4	NC_010369	CGCAAT	2	12	61894	61905	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
5	NC_010369	CGGGCG	2	12	69810	69821	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_010369	GTCGCC	2	12	76476	76487	0 %	16.67 %	33.33 %	50 %	Non-Coding
7	NC_010369	GTCCCG	2	12	76529	76540	0 %	16.67 %	33.33 %	50 %	Non-Coding
8	NC_010369	CCGGTC	2	12	76698	76709	0 %	16.67 %	33.33 %	50 %	Non-Coding
9	NC_010369	GCTGTC	2	12	76747	76758	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_010369	TCGCCG	2	12	77121	77132	0 %	16.67 %	33.33 %	50 %	Non-Coding
11	NC_010369	CCGCCC	2	12	77140	77151	0 %	0 %	16.67 %	83.33 %	Non-Coding
12	NC_010369	CTCGAC	2	12	78545	78556	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
13	NC_010369	GCCTTC	2	12	78965	78976	0 %	33.33 %	16.67 %	50 %	Non-Coding
14	NC_010369	GCTGTC	2	12	80598	80609	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_010369	GTACTC	2	12	82201	82212	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
16	NC_010369	GACAGC	2	12	84752	84763	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_010369	GCTGTC	2	12	84956	84967	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_010369	CTCCAA	2	12	128243	128254	33.33 %	16.67 %	0 %	50 %	Non-Coding
19	NC_010369	GGTCTG	2	12	131107	131118	0 %	33.33 %	50 %	16.67 %	Non-Coding
20	NC_010369	GCGCCC	2	12	134518	134529	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_010369	CGGCAT	2	12	135345	135356	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.