MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Enterococcus faecium DO chromosome

Total Repeats: 116

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017960	ATAAAA	2	12	24907	24918	83.33 %	16.67 %	0 %	0 %	Non-Coding
2	NC_017960	AATAAA	2	12	69746	69757	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_017960	TAATTA	2	12	111233	111244	50 %	50 %	0 %	0 %	Non-Coding
4	NC_017960	TTTTAT	2	12	164786	164797	16.67 %	83.33 %	0 %	0 %	Non-Coding
5	NC_017960	AGGATG	2	12	191038	191049	33.33 %	16.67 %	50 %	0 %	Non-Coding
6	NC_017960	GAAAAA	2	12	321004	321015	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_017960	TGCTTC	2	12	402694	402705	0 %	50 %	16.67 %	33.33 %	Non-Coding
8	NC_017960	TCCTTT	2	12	440315	440326	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_017960	AAAAAG	2	12	440603	440614	83.33 %	0 %	16.67 %	0 %	Non-Coding
10	NC_017960	CATTTT	2	12	459058	459069	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
11	NC_017960	ACTTAA	2	12	491377	491388	50 %	33.33 %	0 %	16.67 %	Non-Coding
12	NC_017960	CATTCT	2	12	518583	518594	16.67 %	50 %	0 %	33.33 %	Non-Coding
13	NC_017960	TAAAAT	2	12	523237	523248	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017960	TTTTTA	2	12	579481	579492	16.67 %	83.33 %	0 %	0 %	Non-Coding
15	NC_017960	TTAGTA	2	12	622042	622053	33.33 %	50 %	16.67 %	0 %	Non-Coding
16	NC_017960	CATTTT	2	12	645790	645801	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
17	NC_017960	TTTTTA	2	12	650003	650014	16.67 %	83.33 %	0 %	0 %	Non-Coding
18	NC_017960	TAAAAA	2	12	664712	664723	83.33 %	16.67 %	0 %	0 %	Non-Coding
19	NC_017960	ATAGTT	2	12	712361	712372	33.33 %	50 %	16.67 %	0 %	Non-Coding
20	NC_017960	GAAAAA	2	12	723187	723198	83.33 %	0 %	16.67 %	0 %	Non-Coding
21	NC_017960	TATTAC	2	12	826856	826867	33.33 %	50 %	0 %	16.67 %	Non-Coding
22	NC_017960	CTTTTT	2	12	926203	926214	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_017960	TAAAAA	2	12	937638	937649	83.33 %	16.67 %	0 %	0 %	Non-Coding
24	NC_017960	TTGAAG	2	12	943715	943726	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_017960	TAAAAA	2	12	946448	946459	83.33 %	16.67 %	0 %	0 %	Non-Coding
26	NC_017960	TGATAG	2	12	963758	963769	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_017960	TAAATT	2	12	1006745	1006756	50 %	50 %	0 %	0 %	Non-Coding
28	NC_017960	TTAAAA	2	12	1007082	1007093	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_017960	AGGGTA	2	12	1014894	1014905	33.33 %	16.67 %	50 %	0 %	Non-Coding
30	NC_017960	ATCAAA	2	12	1020138	1020149	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
31	NC_017960	TTTATA	2	12	1031288	1031299	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017960	TAAAAA	2	12	1032312	1032323	83.33 %	16.67 %	0 %	0 %	Non-Coding
33	NC_017960	AAGTTT	2	12	1033987	1033998	33.33 %	50 %	16.67 %	0 %	Non-Coding
34	NC_017960	ACAGTA	2	12	1049610	1049621	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
35	NC_017960	TAACTC	2	12	1085894	1085905	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_017960	AAAAGA	2	12	1098124	1098135	83.33 %	0 %	16.67 %	0 %	Non-Coding
37	NC_017960	TTCACT	2	12	1117714	1117725	16.67 %	50 %	0 %	33.33 %	Non-Coding
38	NC_017960	AAAATA	2	12	1182927	1182938	83.33 %	16.67 %	0 %	0 %	Non-Coding
39	NC_017960	AGTACC	2	12	1229266	1229277	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
40	NC_017960	ATAAAA	2	12	1231451	1231462	83.33 %	16.67 %	0 %	0 %	Non-Coding
41	NC_017960	TAAACT	2	12	1249845	1249856	50 %	33.33 %	0 %	16.67 %	Non-Coding
42	NC_017960	GAAAAC	2	12	1255512	1255523	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
43	NC_017960	TGCTTC	2	12	1278519	1278530	0 %	50 %	16.67 %	33.33 %	Non-Coding
44	NC_017960	AAAAGA	2	12	1283220	1283231	83.33 %	0 %	16.67 %	0 %	Non-Coding
45	NC_017960	TTTGAA	2	12	1288180	1288191	33.33 %	50 %	16.67 %	0 %	Non-Coding
46	NC_017960	TTTTCG	2	12	1298216	1298227	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
47	NC_017960	TCGGAT	2	12	1326916	1326927	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
48	NC_017960	TAATAG	2	12	1327600	1327611	50 %	33.33 %	16.67 %	0 %	Non-Coding
49	NC_017960	TTCTTT	2	12	1332097	1332108	0 %	83.33 %	0 %	16.67 %	Non-Coding
50	NC_017960	AGAATG	2	12	1361782	1361793	50 %	16.67 %	33.33 %	0 %	Non-Coding
51	NC_017960	CTTTTT	2	12	1383020	1383031	0 %	83.33 %	0 %	16.67 %	Non-Coding
52	NC_017960	GTATTC	2	12	1407755	1407766	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
53	NC_017960	AAAGAA	2	12	1420435	1420446	83.33 %	0 %	16.67 %	0 %	Non-Coding
54	NC_017960	ATTTTT	2	12	1428235	1428246	16.67 %	83.33 %	0 %	0 %	Non-Coding
55	NC_017960	CTCTTT	2	12	1431063	1431074	0 %	66.67 %	0 %	33.33 %	Non-Coding
56	NC_017960	AAATGA	2	12	1496418	1496429	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
57	NC_017960	AAACTC	2	12	1498745	1498756	50 %	16.67 %	0 %	33.33 %	Non-Coding
58	NC_017960	TTTGAT	2	12	1501848	1501859	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
59	NC_017960	TAAAAA	2	12	1541029	1541040	83.33 %	16.67 %	0 %	0 %	Non-Coding
60	NC_017960	AAAAAG	2	12	1547880	1547891	83.33 %	0 %	16.67 %	0 %	Non-Coding
61	NC_017960	AAAACT	2	12	1590707	1590718	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
62	NC_017960	AAAAAG	2	12	1593022	1593033	83.33 %	0 %	16.67 %	0 %	Non-Coding
63	NC_017960	TTTTCT	2	12	1617999	1618010	0 %	83.33 %	0 %	16.67 %	Non-Coding
64	NC_017960	CAAACT	2	12	1647392	1647403	50 %	16.67 %	0 %	33.33 %	Non-Coding
65	NC_017960	TATTTT	2	12	1657364	1657375	16.67 %	83.33 %	0 %	0 %	Non-Coding
66	NC_017960	TCTTTT	2	12	1693259	1693270	0 %	83.33 %	0 %	16.67 %	Non-Coding
67	NC_017960	CTTTTT	2	12	1708093	1708104	0 %	83.33 %	0 %	16.67 %	Non-Coding
68	NC_017960	TATTCA	2	12	1721315	1721326	33.33 %	50 %	0 %	16.67 %	Non-Coding
69	NC_017960	AAAAGT	2	12	1788665	1788676	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
70	NC_017960	AATTTT	2	12	1801128	1801139	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017960	ACAAAT	2	12	1822634	1822645	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
72	NC_017960	TTTGAT	2	12	1827355	1827366	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
73	NC_017960	ATAAAA	2	12	1828581	1828592	83.33 %	16.67 %	0 %	0 %	Non-Coding
74	NC_017960	TCACTA	2	12	1833921	1833932	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
75	NC_017960	ATCAAT	2	12	1877823	1877834	50 %	33.33 %	0 %	16.67 %	Non-Coding
76	NC_017960	TAAAAT	2	12	1880290	1880301	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_017960	CAATAC	2	12	1880328	1880339	50 %	16.67 %	0 %	33.33 %	Non-Coding
78	NC_017960	CACTTC	2	12	1895931	1895942	16.67 %	33.33 %	0 %	50 %	Non-Coding
79	NC_017960	ATTGCA	2	12	1897222	1897233	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
80	NC_017960	TAAATC	2	12	1902866	1902877	50 %	33.33 %	0 %	16.67 %	Non-Coding
81	NC_017960	CATATA	2	12	1912949	1912960	50 %	33.33 %	0 %	16.67 %	Non-Coding
82	NC_017960	TGCTTC	2	12	1981856	1981867	0 %	50 %	16.67 %	33.33 %	Non-Coding
83	NC_017960	TGATTC	2	12	1989133	1989144	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
84	NC_017960	AAAAGC	2	12	2002215	2002226	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
85	NC_017960	AAAAGG	2	12	2026108	2026119	66.67 %	0 %	33.33 %	0 %	Non-Coding
86	NC_017960	CTTTTT	2	12	2062763	2062774	0 %	83.33 %	0 %	16.67 %	Non-Coding
87	NC_017960	AAATCC	2	12	2123373	2123384	50 %	16.67 %	0 %	33.33 %	Non-Coding
88	NC_017960	ACAAGA	2	12	2133322	2133333	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
89	NC_017960	TCTTGC	2	12	2133344	2133355	0 %	50 %	16.67 %	33.33 %	Non-Coding
90	NC_017960	ATCCTT	2	12	2140602	2140613	16.67 %	50 %	0 %	33.33 %	Non-Coding
91	NC_017960	AAGAAA	2	12	2142602	2142613	83.33 %	0 %	16.67 %	0 %	Non-Coding
92	NC_017960	TTTCTT	2	12	2142628	2142639	0 %	83.33 %	0 %	16.67 %	Non-Coding
93	NC_017960	TTATTT	2	12	2142829	2142840	16.67 %	83.33 %	0 %	0 %	Non-Coding
94	NC_017960	TTTCGA	2	12	2154668	2154679	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
95	NC_017960	TAAGAA	2	12	2246490	2246501	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
96	NC_017960	CATTCT	2	12	2269677	2269688	16.67 %	50 %	0 %	33.33 %	Non-Coding
97	NC_017960	AAAACA	2	12	2290913	2290924	83.33 %	0 %	0 %	16.67 %	Non-Coding
98	NC_017960	GAAGCA	2	12	2298377	2298388	50 %	0 %	33.33 %	16.67 %	Non-Coding
99	NC_017960	TGTTTT	2	12	2354333	2354344	0 %	83.33 %	16.67 %	0 %	Non-Coding
100	NC_017960	GAAATA	2	12	2366434	2366445	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
101	NC_017960	AGAAAC	2	12	2435729	2435740	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
102	NC_017960	AAATAC	2	12	2437030	2437041	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
103	NC_017960	TAAAAA	2	12	2439404	2439415	83.33 %	16.67 %	0 %	0 %	Non-Coding
104	NC_017960	AGTAAC	2	12	2444941	2444952	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
105	NC_017960	TTTTAT	2	12	2478438	2478449	16.67 %	83.33 %	0 %	0 %	Non-Coding
106	NC_017960	AATAAC	2	12	2486447	2486458	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
107	NC_017960	TTTATT	2	12	2496163	2496174	16.67 %	83.33 %	0 %	0 %	Non-Coding
108	NC_017960	CTACGT	2	12	2498685	2498696	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
109	NC_017960	AAAAAG	2	12	2509522	2509533	83.33 %	0 %	16.67 %	0 %	Non-Coding
110	NC_017960	TAAAAA	2	12	2540052	2540063	83.33 %	16.67 %	0 %	0 %	Non-Coding
111	NC_017960	AATAAA	2	12	2581053	2581064	83.33 %	16.67 %	0 %	0 %	Non-Coding
112	NC_017960	ATTTTT	2	12	2609574	2609585	16.67 %	83.33 %	0 %	0 %	Non-Coding
113	NC_017960	TAAATA	2	12	2611014	2611025	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_017960	AAAGTA	2	12	2651285	2651296	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
115	NC_017960	ATTTCT	2	12	2666791	2666802	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
116	NC_017960	ATGTTC	2	12	2680489	2680500	16.67 %	50 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.