MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Desulfocapsa sulfexigens DSM 10523 plasmid

Total Repeats: 115

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020305	TGG	2	6	72	77	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_020305	AGG	2	6	123	128	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_020305	AGC	2	6	139	144	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_020305	CTG	2	6	178	183	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_020305	TCT	2	6	270	275	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_020305	TTG	2	6	326	331	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_020305	TAG	2	6	342	347	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_020305	GCG	2	6	1011	1016	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_020305	TCG	2	6	1053	1058	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_020305	ATG	2	6	1750	1755	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_020305	CAA	2	6	1909	1914	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_020305	ACA	2	6	1951	1956	66.67 %	0 %	0 %	33.33 %	Non-Coding
13	NC_020305	CAA	2	6	2014	2019	66.67 %	0 %	0 %	33.33 %	Non-Coding
14	NC_020305	AAC	2	6	2099	2104	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_020305	TCT	2	6	3033	3038	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_020305	GAT	2	6	3103	3108	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_020305	AAT	2	6	3193	3198	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_020305	AAT	2	6	3202	3207	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_020305	TAT	2	6	3267	3272	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_020305	TGG	2	6	3367	3372	0 %	33.33 %	66.67 %	0 %	Non-Coding
21	NC_020305	ACA	2	6	3387	3392	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_020305	ACC	2	6	3567	3572	33.33 %	0 %	0 %	66.67 %	Non-Coding
23	NC_020305	TGT	2	6	3600	3605	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_020305	CTG	2	6	3704	3709	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_020305	CGG	2	6	3734	3739	0 %	0 %	66.67 %	33.33 %	Non-Coding
26	NC_020305	GAT	2	6	3805	3810	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_020305	AAC	2	6	3894	3899	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_020305	GAT	2	6	3967	3972	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_020305	ACC	2	6	4019	4024	33.33 %	0 %	0 %	66.67 %	Non-Coding
30	NC_020305	CTC	2	6	4031	4036	0 %	33.33 %	0 %	66.67 %	Non-Coding
31	NC_020305	TCA	2	6	4039	4044	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_020305	ACT	2	6	4109	4114	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_020305	CAT	2	6	4166	4171	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_020305	AAC	2	6	4202	4207	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_020305	TTC	2	6	6852	6857	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_020305	ACA	2	6	6871	6876	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_020305	GTT	2	6	10588	10593	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_020305	TTC	2	6	10674	10679	0 %	66.67 %	0 %	33.33 %	Non-Coding
39	NC_020305	ATC	2	6	10753	10758	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_020305	TAT	2	6	10810	10815	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_020305	CAA	2	6	10834	10839	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_020305	CAA	2	6	10843	10848	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_020305	AGA	2	6	10851	10856	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_020305	AGG	2	6	11600	11605	33.33 %	0 %	66.67 %	0 %	Non-Coding
45	NC_020305	CTA	2	6	11909	11914	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_020305	GCG	2	6	11972	11977	0 %	0 %	66.67 %	33.33 %	Non-Coding
47	NC_020305	AGA	2	6	11989	11994	66.67 %	0 %	33.33 %	0 %	Non-Coding
48	NC_020305	ATT	2	6	12056	12061	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_020305	ACA	2	6	12064	12069	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_020305	ATA	2	6	16640	16645	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_020305	TAA	2	6	16751	16756	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_020305	CAA	2	6	16757	16762	66.67 %	0 %	0 %	33.33 %	Non-Coding
53	NC_020305	ATA	2	6	16763	16768	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_020305	ACA	3	9	16780	16788	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_020305	GCC	2	6	16799	16804	0 %	0 %	33.33 %	66.67 %	Non-Coding
56	NC_020305	CAA	2	6	16842	16847	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_020305	AAG	2	6	17660	17665	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_020305	ATT	2	6	18120	18125	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_020305	GGT	2	6	18494	18499	0 %	33.33 %	66.67 %	0 %	Non-Coding
60	NC_020305	AAC	2	6	18506	18511	66.67 %	0 %	0 %	33.33 %	Non-Coding
61	NC_020305	GTT	2	6	18524	18529	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_020305	GTG	2	6	21521	21526	0 %	33.33 %	66.67 %	0 %	Non-Coding
63	NC_020305	GTG	2	6	21611	21616	0 %	33.33 %	66.67 %	0 %	Non-Coding
64	NC_020305	ACC	2	6	21690	21695	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_020305	CAC	2	6	21749	21754	33.33 %	0 %	0 %	66.67 %	Non-Coding
66	NC_020305	ATG	2	6	21789	21794	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_020305	GCA	2	6	21831	21836	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_020305	GTG	2	6	21837	21842	0 %	33.33 %	66.67 %	0 %	Non-Coding
69	NC_020305	GGT	2	6	21855	21860	0 %	33.33 %	66.67 %	0 %	Non-Coding
70	NC_020305	CAC	2	6	21869	21874	33.33 %	0 %	0 %	66.67 %	Non-Coding
71	NC_020305	ACA	2	6	21881	21886	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_020305	AGA	2	6	21929	21934	66.67 %	0 %	33.33 %	0 %	Non-Coding
73	NC_020305	ATT	2	6	21973	21978	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_020305	GAT	2	6	22005	22010	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_020305	GCT	2	6	26013	26018	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_020305	CAA	2	6	26136	26141	66.67 %	0 %	0 %	33.33 %	Non-Coding
77	NC_020305	ATA	2	6	27005	27010	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_020305	GCC	2	6	28491	28496	0 %	0 %	33.33 %	66.67 %	Non-Coding
79	NC_020305	ACA	2	6	28634	28639	66.67 %	0 %	0 %	33.33 %	Non-Coding
80	NC_020305	TGG	2	6	28667	28672	0 %	33.33 %	66.67 %	0 %	Non-Coding
81	NC_020305	CAC	2	6	28679	28684	33.33 %	0 %	0 %	66.67 %	Non-Coding
82	NC_020305	GTG	2	6	28694	28699	0 %	33.33 %	66.67 %	0 %	Non-Coding
83	NC_020305	GTG	2	6	28886	28891	0 %	33.33 %	66.67 %	0 %	Non-Coding
84	NC_020305	GCG	2	6	29126	29131	0 %	0 %	66.67 %	33.33 %	Non-Coding
85	NC_020305	TGC	2	6	29216	29221	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_020305	TAT	2	6	29534	29539	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_020305	GGT	2	6	29544	29549	0 %	33.33 %	66.67 %	0 %	Non-Coding
88	NC_020305	AGG	2	6	29953	29958	33.33 %	0 %	66.67 %	0 %	Non-Coding
89	NC_020305	GGC	2	6	32749	32754	0 %	0 %	66.67 %	33.33 %	Non-Coding
90	NC_020305	ACT	2	6	32755	32760	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_020305	CTT	2	6	32903	32908	0 %	66.67 %	0 %	33.33 %	Non-Coding
92	NC_020305	ATG	2	6	32919	32924	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_020305	ATT	2	6	32940	32945	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_020305	ACC	2	6	33465	33470	33.33 %	0 %	0 %	66.67 %	Non-Coding
95	NC_020305	TAC	2	6	33562	33567	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_020305	ACC	2	6	33659	33664	33.33 %	0 %	0 %	66.67 %	Non-Coding
97	NC_020305	GCC	2	6	33791	33796	0 %	0 %	33.33 %	66.67 %	Non-Coding
98	NC_020305	GCC	2	6	34902	34907	0 %	0 %	33.33 %	66.67 %	Non-Coding
99	NC_020305	TCA	2	6	34996	35001	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
100	NC_020305	CCG	2	6	35134	35139	0 %	0 %	33.33 %	66.67 %	Non-Coding
101	NC_020305	CGG	2	6	35150	35155	0 %	0 %	66.67 %	33.33 %	Non-Coding
102	NC_020305	GGT	2	6	35593	35598	0 %	33.33 %	66.67 %	0 %	Non-Coding
103	NC_020305	GTT	2	6	35640	35645	0 %	66.67 %	33.33 %	0 %	Non-Coding
104	NC_020305	CAA	2	6	35690	35695	66.67 %	0 %	0 %	33.33 %	Non-Coding
105	NC_020305	AAG	2	6	35775	35780	66.67 %	0 %	33.33 %	0 %	Non-Coding
106	NC_020305	CCT	2	6	35784	35789	0 %	33.33 %	0 %	66.67 %	Non-Coding
107	NC_020305	AGG	2	6	35853	35858	33.33 %	0 %	66.67 %	0 %	Non-Coding
108	NC_020305	ACT	2	6	35940	35945	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
109	NC_020305	GCC	2	6	36126	36131	0 %	0 %	33.33 %	66.67 %	Non-Coding
110	NC_020305	CCT	2	6	36188	36193	0 %	33.33 %	0 %	66.67 %	Non-Coding
111	NC_020305	GGA	2	6	36215	36220	33.33 %	0 %	66.67 %	0 %	Non-Coding
112	NC_020305	ACG	2	6	36335	36340	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
113	NC_020305	AGC	2	6	36429	36434	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
114	NC_020305	AAT	2	6	36483	36488	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_020305	CAG	2	6	36646	36651	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.