MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Deinococcus geothermalis DSM 11300

Total Repeats: 103

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008025	GGATTG	2	12	11481	11492	16.67 %	33.33 %	50 %	0 %	Non-Coding
2	NC_008025	CACCTC	2	12	11614	11625	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
3	NC_008025	TGCTGG	2	12	15522	15533	0 %	33.33 %	50 %	16.67 %	Non-Coding
4	NC_008025	ACTTCG	2	12	26713	26724	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
5	NC_008025	GCGCGG	2	12	37424	37435	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_008025	CAGCGA	2	12	56957	56968	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_008025	CAGTGC	2	12	72242	72253	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
8	NC_008025	GCTTTT	2	12	78986	78997	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
9	NC_008025	ACGGTG	2	12	128107	128118	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
10	NC_008025	GTGTGA	2	12	152215	152226	16.67 %	33.33 %	50 %	0 %	Non-Coding
11	NC_008025	CGGGCG	2	12	205949	205960	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_008025	AAGGGA	2	12	257863	257874	50 %	0 %	50 %	0 %	Non-Coding
13	NC_008025	AGGCGG	2	12	287665	287676	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
14	NC_008025	GAGGTC	2	12	300366	300377	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
15	NC_008025	CAAGCG	2	12	400246	400257	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_008025	AGGGGG	2	12	441829	441840	16.67 %	0 %	83.33 %	0 %	Non-Coding
17	NC_008025	CACGTC	2	12	442247	442258	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
18	NC_008025	GCCCCC	2	12	483498	483509	0 %	0 %	16.67 %	83.33 %	Non-Coding
19	NC_008025	GGGGGA	2	12	484689	484700	16.67 %	0 %	83.33 %	0 %	Non-Coding
20	NC_008025	GGACGC	2	12	486957	486968	16.67 %	0 %	50 %	33.33 %	Non-Coding
21	NC_008025	CGATAA	2	12	562477	562488	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
22	NC_008025	AGGGGA	2	12	569908	569919	33.33 %	0 %	66.67 %	0 %	Non-Coding
23	NC_008025	CCTGAC	2	12	589264	589275	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
24	NC_008025	CCCTGC	2	12	619437	619448	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
25	NC_008025	AGGGCG	2	12	623031	623042	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
26	NC_008025	CGCTTA	2	12	644554	644565	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
27	NC_008025	CTGCTT	2	12	657707	657718	0 %	50 %	16.67 %	33.33 %	Non-Coding
28	NC_008025	AAGGAG	2	12	658018	658029	50 %	0 %	50 %	0 %	Non-Coding
29	NC_008025	AGCACG	2	12	744941	744952	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_008025	GGGGTT	2	12	767798	767809	0 %	33.33 %	66.67 %	0 %	Non-Coding
31	NC_008025	GCCTGC	2	12	769843	769854	0 %	16.67 %	33.33 %	50 %	Non-Coding
32	NC_008025	TGCTGG	2	12	776794	776805	0 %	33.33 %	50 %	16.67 %	Non-Coding
33	NC_008025	GACCGG	2	12	898108	898119	16.67 %	0 %	50 %	33.33 %	Non-Coding
34	NC_008025	CTTCTG	2	12	899732	899743	0 %	50 %	16.67 %	33.33 %	Non-Coding
35	NC_008025	GACCTC	2	12	931528	931539	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
36	NC_008025	CGGGGG	2	12	943958	943969	0 %	0 %	83.33 %	16.67 %	Non-Coding
37	NC_008025	TCTTGC	2	12	950101	950112	0 %	50 %	16.67 %	33.33 %	Non-Coding
38	NC_008025	GCCTCC	2	12	963549	963560	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
39	NC_008025	CCGCCC	2	12	1014585	1014596	0 %	0 %	16.67 %	83.33 %	Non-Coding
40	NC_008025	CATGCT	2	12	1098997	1099008	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
41	NC_008025	CAAAGG	2	12	1099023	1099034	50 %	0 %	33.33 %	16.67 %	Non-Coding
42	NC_008025	TTCTCG	2	12	1128392	1128403	0 %	50 %	16.67 %	33.33 %	Non-Coding
43	NC_008025	GTCCGC	2	12	1138292	1138303	0 %	16.67 %	33.33 %	50 %	Non-Coding
44	NC_008025	GGGCCG	2	12	1159609	1159620	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_008025	CGATGC	2	12	1164265	1164276	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
46	NC_008025	GGCTTC	2	12	1191086	1191097	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_008025	TGCTTG	2	12	1207097	1207108	0 %	50 %	33.33 %	16.67 %	Non-Coding
48	NC_008025	GGGCGG	2	12	1211407	1211418	0 %	0 %	83.33 %	16.67 %	Non-Coding
49	NC_008025	GCCTCT	2	12	1221863	1221874	0 %	33.33 %	16.67 %	50 %	Non-Coding
50	NC_008025	AGGCTG	2	12	1251148	1251159	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
51	NC_008025	CCCCGC	2	12	1303542	1303553	0 %	0 %	16.67 %	83.33 %	Non-Coding
52	NC_008025	GGCGGT	2	12	1307109	1307120	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
53	NC_008025	GGCTGC	2	12	1326146	1326157	0 %	16.67 %	50 %	33.33 %	Non-Coding
54	NC_008025	CACGAG	2	12	1351635	1351646	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_008025	GCCCCC	2	12	1360328	1360339	0 %	0 %	16.67 %	83.33 %	Non-Coding
56	NC_008025	CTGCCT	2	12	1363419	1363430	0 %	33.33 %	16.67 %	50 %	Non-Coding
57	NC_008025	CCTTCC	2	12	1378796	1378807	0 %	33.33 %	0 %	66.67 %	Non-Coding
58	NC_008025	GCCAGG	2	12	1395060	1395071	16.67 %	0 %	50 %	33.33 %	Non-Coding
59	NC_008025	GGGGAC	2	12	1406183	1406194	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
60	NC_008025	CAGCCA	2	12	1444934	1444945	33.33 %	0 %	16.67 %	50 %	Non-Coding
61	NC_008025	GCACAT	2	12	1468657	1468668	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
62	NC_008025	TACGTC	2	12	1470068	1470079	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
63	NC_008025	AGAGGG	2	12	1470291	1470302	33.33 %	0 %	66.67 %	0 %	Non-Coding
64	NC_008025	CGGCCT	2	12	1471727	1471738	0 %	16.67 %	33.33 %	50 %	Non-Coding
65	NC_008025	GTCTTT	2	12	1475192	1475203	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
66	NC_008025	GCGCGG	2	12	1488466	1488477	0 %	0 %	66.67 %	33.33 %	Non-Coding
67	NC_008025	TTGTCT	2	12	1495217	1495228	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
68	NC_008025	AGCGGG	2	12	1516551	1516562	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
69	NC_008025	GTGAAC	2	12	1595307	1595318	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
70	NC_008025	GGCAGA	2	12	1599508	1599519	33.33 %	0 %	50 %	16.67 %	Non-Coding
71	NC_008025	CGGGGG	2	12	1602949	1602960	0 %	0 %	83.33 %	16.67 %	Non-Coding
72	NC_008025	GCTTTT	2	12	1617923	1617934	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
73	NC_008025	CACGTA	2	12	1660607	1660618	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
74	NC_008025	GTCAGC	2	12	1660713	1660724	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
75	NC_008025	TTTACT	2	12	1665792	1665803	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
76	NC_008025	GCACCT	2	12	1673229	1673240	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
77	NC_008025	CCACCC	2	12	1713819	1713830	16.67 %	0 %	0 %	83.33 %	Non-Coding
78	NC_008025	CTGTGG	2	12	1766878	1766889	0 %	33.33 %	50 %	16.67 %	Non-Coding
79	NC_008025	TCAGCT	2	12	1800555	1800566	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
80	NC_008025	TCGGCT	2	12	1818136	1818147	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
81	NC_008025	CTCAGC	2	12	1888926	1888937	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
82	NC_008025	TCACCC	2	12	1924924	1924935	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
83	NC_008025	ACCCCC	2	12	2146440	2146451	16.67 %	0 %	0 %	83.33 %	Non-Coding
84	NC_008025	CTTTTT	2	12	2147031	2147042	0 %	83.33 %	0 %	16.67 %	Non-Coding
85	NC_008025	AAGTGG	2	12	2167089	2167100	33.33 %	16.67 %	50 %	0 %	Non-Coding
86	NC_008025	CTCCAG	2	12	2185880	2185891	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
87	NC_008025	GGTCCC	2	12	2201472	2201483	0 %	16.67 %	33.33 %	50 %	Non-Coding
88	NC_008025	CTGCGG	2	12	2202894	2202905	0 %	16.67 %	50 %	33.33 %	Non-Coding
89	NC_008025	CCCCAC	2	12	2250022	2250033	16.67 %	0 %	0 %	83.33 %	Non-Coding
90	NC_008025	CGGTTT	2	12	2266303	2266314	0 %	50 %	33.33 %	16.67 %	Non-Coding
91	NC_008025	GGCGCA	2	12	2279891	2279902	16.67 %	0 %	50 %	33.33 %	Non-Coding
92	NC_008025	CAGGAC	2	12	2288366	2288377	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
93	NC_008025	ACGTAT	2	12	2325606	2325617	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
94	NC_008025	GCCGGG	2	12	2332526	2332537	0 %	0 %	66.67 %	33.33 %	Non-Coding
95	NC_008025	GCAAGA	2	12	2344239	2344250	50 %	0 %	33.33 %	16.67 %	Non-Coding
96	NC_008025	TCCCGC	2	12	2349072	2349083	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
97	NC_008025	GGCCCC	2	12	2352050	2352061	0 %	0 %	33.33 %	66.67 %	Non-Coding
98	NC_008025	CGCTTG	2	12	2361908	2361919	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
99	NC_008025	TCAGGC	2	12	2377394	2377405	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
100	NC_008025	ACCCGC	2	12	2397042	2397053	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
101	NC_008025	CAGTGC	2	12	2420789	2420800	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
102	NC_008025	AGTTCG	2	12	2421214	2421225	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
103	NC_008025	TGCATA	2	12	2436245	2436256	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.