MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis E/SotonE4 complte genome

Total Repeats: 35

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020969	CAAAAA	2	12	6852	6863	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_020969	AAAAAT	2	12	61361	61372	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_020969	ATCTAG	2	12	77084	77095	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
4	NC_020969	TTTTAG	2	12	116350	116361	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_020969	TAAAAA	2	12	120946	120957	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_020969	AGAAAA	2	12	182563	182574	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_020969	TATGAA	2	12	195337	195348	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_020969	AACCCT	2	12	255335	255346	33.33 %	16.67 %	0 %	50 %	Non-Coding
9	NC_020969	ATTTTT	2	12	256139	256150	16.67 %	83.33 %	0 %	0 %	Non-Coding
10	NC_020969	AGGAGA	2	12	271238	271249	50 %	0 %	50 %	0 %	Non-Coding
11	NC_020969	ATATTA	2	12	280136	280147	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020969	AAAAAT	2	12	322486	322497	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_020969	AAAAAG	2	12	324304	324315	83.33 %	0 %	16.67 %	0 %	Non-Coding
14	NC_020969	AGAATA	2	12	361798	361809	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
15	NC_020969	TAACTA	2	12	503522	503533	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_020969	AAGAAA	2	12	503535	503546	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_020969	AGAATA	2	12	509513	509524	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_020969	AACTAA	2	12	515249	515260	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
19	NC_020969	TCCCTC	2	12	548986	548997	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_020969	AAAAAT	2	12	566958	566969	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_020969	TAGGGG	2	12	606111	606122	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
22	NC_020969	TCTTTT	2	12	618096	618107	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_020969	TTATTT	2	12	649308	649319	16.67 %	83.33 %	0 %	0 %	Non-Coding
24	NC_020969	TATTTT	2	12	755254	755265	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_020969	TTTTCT	2	12	805169	805180	0 %	83.33 %	0 %	16.67 %	Non-Coding
26	NC_020969	ATTTTT	2	12	808948	808959	16.67 %	83.33 %	0 %	0 %	Non-Coding
27	NC_020969	ATTTTT	2	12	835427	835438	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_020969	TAAGGA	2	12	856391	856402	50 %	16.67 %	33.33 %	0 %	Non-Coding
29	NC_020969	CCGGAG	2	12	857309	857320	16.67 %	0 %	50 %	33.33 %	Non-Coding
30	NC_020969	CCTCTA	2	12	870460	870471	16.67 %	33.33 %	0 %	50 %	Non-Coding
31	NC_020969	TAAGGA	2	12	878442	878453	50 %	16.67 %	33.33 %	0 %	Non-Coding
32	NC_020969	CCGGAG	2	12	879360	879371	16.67 %	0 %	50 %	33.33 %	Non-Coding
33	NC_020969	GACGGC	2	12	921784	921795	16.67 %	0 %	50 %	33.33 %	Non-Coding
34	NC_020969	AAACAA	2	12	923472	923483	83.33 %	0 %	0 %	16.67 %	Non-Coding
35	NC_020969	TAAAAT	2	12	1042582	1042593	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.