MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydophila psittaci 6BC chromosome

Total Repeats: 49

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017287	ATTTAA	2	12	33506	33517	50 %	50 %	0 %	0 %	Non-Coding
2	NC_017287	TTTTTA	2	12	39305	39316	16.67 %	83.33 %	0 %	0 %	Non-Coding
3	NC_017287	ATTATA	2	12	77669	77680	50 %	50 %	0 %	0 %	Non-Coding
4	NC_017287	ATAGGC	2	12	146841	146852	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_017287	TTCCGT	2	12	147936	147947	0 %	50 %	16.67 %	33.33 %	Non-Coding
6	NC_017287	AGAAAA	2	12	162971	162982	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_017287	TTTTTA	2	12	210394	210405	16.67 %	83.33 %	0 %	0 %	Non-Coding
8	NC_017287	TAAAGA	2	12	226749	226760	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
9	NC_017287	ATTATA	2	12	239618	239629	50 %	50 %	0 %	0 %	Non-Coding
10	NC_017287	TTGAAT	2	12	243931	243942	33.33 %	50 %	16.67 %	0 %	Non-Coding
11	NC_017287	ATATAA	2	12	261683	261694	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017287	GGGAAA	2	12	267650	267661	50 %	0 %	50 %	0 %	Non-Coding
13	NC_017287	TAAGAA	2	12	277569	277580	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_017287	TAAAAT	2	12	291757	291768	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017287	GCAATC	2	12	312666	312677	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
16	NC_017287	GTCTTT	2	12	328073	328084	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
17	NC_017287	TGAAAA	2	12	337130	337141	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_017287	ATTTTT	2	12	371518	371529	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_017287	AAAATC	2	12	396526	396537	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
20	NC_017287	GACTGT	2	12	424936	424947	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
21	NC_017287	AAAAAT	2	12	470505	470516	83.33 %	16.67 %	0 %	0 %	Non-Coding
22	NC_017287	TATAAT	2	12	489996	490007	50 %	50 %	0 %	0 %	Non-Coding
23	NC_017287	TTAATT	2	12	507692	507703	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017287	CTTTTG	2	12	655690	655701	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
25	NC_017287	AAATAC	2	12	661248	661259	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
26	NC_017287	CAATCT	2	12	661834	661845	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_017287	AAGGGA	2	12	702934	702945	50 %	0 %	50 %	0 %	Non-Coding
28	NC_017287	ATTAAT	2	12	705624	705635	50 %	50 %	0 %	0 %	Non-Coding
29	NC_017287	TTAGTG	2	12	707781	707792	16.67 %	50 %	33.33 %	0 %	Non-Coding
30	NC_017287	ATTTTA	2	12	751855	751866	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_017287	TAACCT	2	12	793238	793249	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_017287	CTATGT	2	12	813521	813532	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
33	NC_017287	ATTTTA	2	12	950688	950699	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017287	ATCTAT	2	12	965980	965991	33.33 %	50 %	0 %	16.67 %	Non-Coding
35	NC_017287	ATAAAA	2	12	982428	982439	83.33 %	16.67 %	0 %	0 %	Non-Coding
36	NC_017287	TGAGAA	2	12	995278	995289	50 %	16.67 %	33.33 %	0 %	Non-Coding
37	NC_017287	ATATCT	2	12	1000297	1000308	33.33 %	50 %	0 %	16.67 %	Non-Coding
38	NC_017287	TTTTCT	2	12	1013384	1013395	0 %	83.33 %	0 %	16.67 %	Non-Coding
39	NC_017287	AAATAA	2	12	1018607	1018618	83.33 %	16.67 %	0 %	0 %	Non-Coding
40	NC_017287	TCGCTT	2	12	1021467	1021478	0 %	50 %	16.67 %	33.33 %	Non-Coding
41	NC_017287	TTATCC	2	12	1022371	1022382	16.67 %	50 %	0 %	33.33 %	Non-Coding
42	NC_017287	AAATTT	2	12	1024512	1024523	50 %	50 %	0 %	0 %	Non-Coding
43	NC_017287	CTTTGT	2	12	1035955	1035966	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
44	NC_017287	AAAAAT	2	12	1056230	1056241	83.33 %	16.67 %	0 %	0 %	Non-Coding
45	NC_017287	TAATTT	2	12	1102864	1102875	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_017287	AAAATA	2	12	1141364	1141375	83.33 %	16.67 %	0 %	0 %	Non-Coding
47	NC_017287	TACAGA	2	12	1154045	1154056	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
48	NC_017287	GTTAAA	2	12	1166972	1166983	50 %	33.33 %	16.67 %	0 %	Non-Coding
49	NC_017287	CCTTCG	2	12	1169761	1169772	0 %	33.33 %	16.67 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.