MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Chlamydophila pneumoniae LPCoLN chromosome

Total Repeats: 3064

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
3001	NC_017285	AAAT	2	8	1214537	1214544	75 %	25 %	0 %	0 %	Non-Coding
3002	NC_017285	AT	3	6	1214548	1214553	50 %	50 %	0 %	0 %	Non-Coding
3003	NC_017285	ATTAA	2	10	1214586	1214595	60 %	40 %	0 %	0 %	Non-Coding
3004	NC_017285	TC	3	6	1214614	1214619	0 %	50 %	0 %	50 %	Non-Coding
3005	NC_017285	CT	3	6	1218514	1218519	0 %	50 %	0 %	50 %	Non-Coding
3006	NC_017285	TAATTA	2	12	1218520	1218531	50 %	50 %	0 %	0 %	Non-Coding
3007	NC_017285	AAG	3	9	1222424	1222432	66.67 %	0 %	33.33 %	0 %	Non-Coding
3008	NC_017285	T	6	6	1222442	1222447	0 %	100 %	0 %	0 %	Non-Coding
3009	NC_017285	T	6	6	1222495	1222500	0 %	100 %	0 %	0 %	Non-Coding
3010	NC_017285	AG	3	6	1222637	1222642	50 %	0 %	50 %	0 %	Non-Coding
3011	NC_017285	CAT	2	6	1222665	1222670	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3012	NC_017285	TC	3	6	1222692	1222697	0 %	50 %	0 %	50 %	Non-Coding
3013	NC_017285	AACT	2	8	1222698	1222705	50 %	25 %	0 %	25 %	Non-Coding
3014	NC_017285	GAA	2	6	1222710	1222715	66.67 %	0 %	33.33 %	0 %	Non-Coding
3015	NC_017285	TC	3	6	1222726	1222731	0 %	50 %	0 %	50 %	Non-Coding
3016	NC_017285	C	6	6	1223911	1223916	0 %	0 %	0 %	100 %	Non-Coding
3017	NC_017285	G	6	6	1223933	1223938	0 %	0 %	100 %	0 %	Non-Coding
3018	NC_017285	T	6	6	1223965	1223970	0 %	100 %	0 %	0 %	Non-Coding
3019	NC_017285	TAA	2	6	1223975	1223980	66.67 %	33.33 %	0 %	0 %	Non-Coding
3020	NC_017285	T	6	6	1227666	1227671	0 %	100 %	0 %	0 %	Non-Coding
3021	NC_017285	A	6	6	1227684	1227689	100 %	0 %	0 %	0 %	Non-Coding
3022	NC_017285	AAC	2	6	1229423	1229428	66.67 %	0 %	0 %	33.33 %	Non-Coding
3023	NC_017285	CAA	2	6	1229544	1229549	66.67 %	0 %	0 %	33.33 %	Non-Coding
3024	NC_017285	AGA	3	9	1229570	1229578	66.67 %	0 %	33.33 %	0 %	Non-Coding
3025	NC_017285	A	6	6	1230792	1230797	100 %	0 %	0 %	0 %	Non-Coding
3026	NC_017285	CAA	2	6	1230811	1230816	66.67 %	0 %	0 %	33.33 %	Non-Coding
3027	NC_017285	T	7	7	1230871	1230877	0 %	100 %	0 %	0 %	Non-Coding
3028	NC_017285	T	7	7	1230911	1230917	0 %	100 %	0 %	0 %	Non-Coding
3029	NC_017285	T	6	6	1230935	1230940	0 %	100 %	0 %	0 %	Non-Coding
3030	NC_017285	CTTTC	2	10	1230971	1230980	0 %	60 %	0 %	40 %	Non-Coding
3031	NC_017285	TC	4	8	1230979	1230986	0 %	50 %	0 %	50 %	Non-Coding
3032	NC_017285	TCTTG	2	10	1231030	1231039	0 %	60 %	20 %	20 %	Non-Coding
3033	NC_017285	TAA	2	6	1231365	1231370	66.67 %	33.33 %	0 %	0 %	Non-Coding
3034	NC_017285	GCA	2	6	1232246	1232251	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3035	NC_017285	A	7	7	1232251	1232257	100 %	0 %	0 %	0 %	Non-Coding
3036	NC_017285	T	7	7	1232282	1232288	0 %	100 %	0 %	0 %	Non-Coding
3037	NC_017285	TAACA	2	10	1233818	1233827	60 %	20 %	0 %	20 %	Non-Coding
3038	NC_017285	A	6	6	1233893	1233898	100 %	0 %	0 %	0 %	Non-Coding
3039	NC_017285	TAC	2	6	1233901	1233906	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3040	NC_017285	CTTTA	2	10	1233916	1233925	20 %	60 %	0 %	20 %	Non-Coding
3041	NC_017285	G	6	6	1233939	1233944	0 %	0 %	100 %	0 %	Non-Coding
3042	NC_017285	A	6	6	1235810	1235815	100 %	0 %	0 %	0 %	Non-Coding
3043	NC_017285	ATT	2	6	1235831	1235836	33.33 %	66.67 %	0 %	0 %	Non-Coding
3044	NC_017285	TA	5	10	1235847	1235856	50 %	50 %	0 %	0 %	Non-Coding
3045	NC_017285	GTGTT	2	10	1235857	1235866	0 %	60 %	40 %	0 %	Non-Coding
3046	NC_017285	A	6	6	1235885	1235890	100 %	0 %	0 %	0 %	Non-Coding
3047	NC_017285	A	6	6	1235892	1235897	100 %	0 %	0 %	0 %	Non-Coding
3048	NC_017285	A	6	6	1235900	1235905	100 %	0 %	0 %	0 %	Non-Coding
3049	NC_017285	ATTC	2	8	1235947	1235954	25 %	50 %	0 %	25 %	Non-Coding
3050	NC_017285	GTAA	2	8	1236704	1236711	50 %	25 %	25 %	0 %	Non-Coding
3051	NC_017285	A	6	6	1238349	1238354	100 %	0 %	0 %	0 %	Non-Coding
3052	NC_017285	GA	4	8	1238381	1238388	50 %	0 %	50 %	0 %	Non-Coding
3053	NC_017285	A	6	6	1238747	1238752	100 %	0 %	0 %	0 %	Non-Coding
3054	NC_017285	ACT	2	6	1240465	1240470	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3055	NC_017285	ATA	2	6	1240482	1240487	66.67 %	33.33 %	0 %	0 %	Non-Coding
3056	NC_017285	CGA	2	6	1240515	1240520	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3057	NC_017285	GC	3	6	1240524	1240529	0 %	0 %	50 %	50 %	Non-Coding
3058	NC_017285	ACG	2	6	1240549	1240554	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3059	NC_017285	A	6	6	1240618	1240623	100 %	0 %	0 %	0 %	Non-Coding
3060	NC_017285	CTCA	2	8	1240838	1240845	25 %	25 %	0 %	50 %	Non-Coding
3061	NC_017285	CAA	2	6	1240847	1240852	66.67 %	0 %	0 %	33.33 %	Non-Coding
3062	NC_017285	AAC	2	6	1240880	1240885	66.67 %	0 %	0 %	33.33 %	Non-Coding
3063	NC_017285	AGA	3	9	1240944	1240952	66.67 %	0 %	33.33 %	0 %	Non-Coding
3064	NC_017285	AT	4	8	1240976	1240983	50 %	50 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.