MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Cupriavidus necator N-1 plasmid BB2p

Total Repeats: 26

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015724	GGAGCC	2	12	2635	2646	16.67 %	0 %	50 %	33.33 %	Non-Coding
2	NC_015724	TGCGAC	2	12	4093	4104	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
3	NC_015724	CGCGGG	2	12	9157	9168	0 %	0 %	66.67 %	33.33 %	Non-Coding
4	NC_015724	GGCGCG	2	12	32229	32240	0 %	0 %	66.67 %	33.33 %	Non-Coding
5	NC_015724	GCCCTG	2	12	62599	62610	0 %	16.67 %	33.33 %	50 %	Non-Coding
6	NC_015724	AGAAAG	2	12	67012	67023	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_015724	TCATGC	2	12	80480	80491	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
8	NC_015724	CCAACA	2	12	102157	102168	50 %	0 %	0 %	50 %	Non-Coding
9	NC_015724	GCGCTC	2	12	107939	107950	0 %	16.67 %	33.33 %	50 %	Non-Coding
10	NC_015724	CGACAC	2	12	134911	134922	33.33 %	0 %	16.67 %	50 %	Non-Coding
11	NC_015724	CGGCAG	2	12	179150	179161	16.67 %	0 %	50 %	33.33 %	Non-Coding
12	NC_015724	TCGGCT	2	12	233394	233405	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_015724	GCGCTC	2	12	233524	233535	0 %	16.67 %	33.33 %	50 %	Non-Coding
14	NC_015724	CCGGCC	2	12	256371	256382	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_015724	GGCCAG	2	12	256394	256405	16.67 %	0 %	50 %	33.33 %	Non-Coding
16	NC_015724	GCCGGC	2	12	256469	256480	0 %	0 %	50 %	50 %	Non-Coding
17	NC_015724	TCGATG	2	12	281371	281382	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
18	NC_015724	GCTTCC	2	12	282175	282186	0 %	33.33 %	16.67 %	50 %	Non-Coding
19	NC_015724	AGCCAC	2	12	283553	283564	33.33 %	0 %	16.67 %	50 %	Non-Coding
20	NC_015724	CGGATG	2	12	284687	284698	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
21	NC_015724	CGCCTA	2	12	313142	313153	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
22	NC_015724	TCGCGG	2	12	363607	363618	0 %	16.67 %	50 %	33.33 %	Non-Coding
23	NC_015724	ACCCGC	2	12	380917	380928	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
24	NC_015724	TGCTCA	2	12	381580	381591	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
25	NC_015724	GGGATG	2	12	383395	383406	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
26	NC_015724	TGTCGA	2	12	385855	385866	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.